cPecan

C and python code for pairwise multiple sequence alignment, pulling out this functionality from the Cactus alignment program.

TODOS:

Rename binaries to reflect new package

Improve documentation of the library functions

Write a proper readme.

Name		Name	Last commit message	Last commit date
Latest commit History 20 Commits
externalTools		externalTools
impl		impl
inc		inc
tests		tests
LICENSE		LICENSE
Makefile		Makefile
README.md		README.md
__init__.py		__init__.py
allTests.py		allTests.py
cPecanAlign.c		cPecanAlign.c
cPecanEm.py		cPecanEm.py
cPecanEmTest.py		cPecanEmTest.py
cPecanLibTest.py		cPecanLibTest.py
cPecanModifyHmm.py		cPecanModifyHmm.py
cPecanRealign.c		cPecanRealign.c
cPecanRealignTest.py		cPecanRealignTest.py
common.py		common.py
include.mk		include.mk

adderan/cPecan