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#Reference Paper Codebase

This is a set of evaluation scripts developed by Ngan Nguyen and Benedict Paten to assess the Reference MHC genome project data.

##Dependencies

##Running Tests Download the data set here, expand it and place the data/ directory in the same directory as this README. Then type

make test

and off you go. There are larger and longer running tests inside of the Makefile if you'd like to justify spending a couple hours doing something else.

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Scripts for evaluating a cactus reference genome

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