To simply setup on UAF, do

git clone git@github.com:cmstas/MT2Analysis.git

and then

cd MT2Analysis
source setup.sh

cd babymaker
source doTest.sh

See further instructions in the README.md in folder

babymaker/batchsubmit

(this assumes you already have root setup)

git clone git@github.com:cmstas/MT2Analysis.git
cd MT2Analysis/MT2Looper
make

Starting from the (skimmed) babies:

Go to QCDLooper and modify do.sh to point towards the data and mc babies you wish to use. The standard skims will not work here, as the rphi estimate needs low MT2 events. Worst case, you can use completely unskimmed babies, but this takes a long time.

. do.sh

TODO: Modify QCDLooper to run on any of 2016, 2017, or 2018 intelligently. It currently (9 Aug 2018) runs with 2017 settings with 2016 commented out.

Now, follow the instructions in QCDLooper and scripts/qcdEstimate, then edit string rphi_file_name in MT2Looper/MT2Looper.cc point to your qcdHistos.root output.

Go to MT2Looper and modify INDIR, OUTDIR, and Samples in do.sh, then do:

. do.sh

Go to scripts and modify INDIR in makeDataDrivenEstimates.sh to point to the output dir from MT2Looper. Then do:

. makeDataDrivenEstimates.sh

Go to scripts and modify INDIR in processSignal.sh to point to the output dir from MT2Looper. Also comment out any signal scans that you did not process. Then do:

. processSignal.sh

Note that this also creates histogram files translated to ETH's format, for sharing with them.

Go to scripts and modify INDIR, OUTDIR, DOFULLSCAN, and samples in makeAllCards.sh. Then do:

root -b -q cardMaker.C+  # to compile
. makeAllCards.sh

See instructions in README inside the limits/batchsubmit subdirectory.