std::string
SBasePlugin::getURI() const
{
if (mSBMLExt == NULL)
return getElementNamespace();
const std::string &package = mSBMLExt->getName();
const SBMLDocument* doc = getSBMLDocument();
if (doc == NULL)
return getElementNamespace();
SBMLNamespaces* sbmlns = doc->getSBMLNamespaces();
if (sbmlns == NULL)
return getElementNamespace();
if (package == "" || package == "core")
return sbmlns->getURI();
std::string packageURI = sbmlns->getNamespaces()->getURI(package);
if (!packageURI.empty())
return packageURI;
return getElementNamespace();
}
std::string
ASTBasePlugin::getURI() const
{
if (mSBMLExt == NULL)
return getElementNamespace();
const std::string &package = (mSBMLExt != NULL) ? mSBMLExt->getName() : std::string("");
SBMLNamespaces* sbmlns = getSBMLNamespaces();
if (sbmlns == NULL)
return getElementNamespace();
if (package == "" || package == "core")
return sbmlns->getURI();
std::string packageURI = sbmlns->getNamespaces()->getURI(package);
if (!packageURI.empty())
return packageURI;
return getElementNamespace();
}
LIBSBML_EXTERN XMLNode getXmlNodeForSBase(const SBase* object)
{
char* rawsbml = const_cast<SBase*>(object)->toSBML();
SBMLNamespaces *sbmlns = object->getSBMLNamespaces();
XMLNamespaces* xmlns = sbmlns->getNamespaces()->clone();
// in rare cases the above returns a package element with default namespace, however the
// XMLNamespaces would then assign the actual default namespace, which is in most cases
// the SBML namespace. In that case we adjust the default namespace here
ISBMLExtensionNamespaces *extns = dynamic_cast<ISBMLExtensionNamespaces*>(sbmlns);
if (extns != NULL)
{
xmlns->remove("");
xmlns->add(xmlns->getURI(extns->getPackageName()), "");
}
XMLNode* tmp = XMLNode::convertStringToXMLNode(rawsbml, xmlns);
if (tmp == NULL) return XMLNode();
XMLNode result(*tmp);
delete tmp;
delete xmlns;
free(rawsbml);
return result;
}