ReverseXAxis (TGraphAsymmErrors *g, double size)
{
// Remove the current axis
g->GetXaxis()->SetLabelOffset(999);
g->GetXaxis()->SetTickLength(0);
// Redraw the new axis
gPad->Update();
g->GetYaxis()->SetTitle("Event Selection Efficiency");
TGaxis *newaxis = new TGaxis(gPad->GetUxmax(),
gPad->GetUymin(),
gPad->GetUxmin(),
gPad->GetUymin(),
g->GetXaxis()->GetXmin(),
g->GetXaxis()->GetXmax(),
510,"-");
newaxis->SetLabelOffset(-0.04);
newaxis->SetTitle("Centrality");
newaxis->SetTitleFont(42);
newaxis->SetTitleSize(size);
newaxis->SetLabelSize(size);
newaxis->CenterTitle();
newaxis->SetLabelFont(42);
newaxis->Draw();
}
void ReverseXAxis (TH1 *h)
{
h->GetXaxis()->SetLabelOffset(999);
h->GetXaxis()->SetTickLength(0);
gPad->Update();
TGaxis *newaxis = new TGaxis(gPad->GetUxmax(),
gPad->GetUymin(),
gPad->GetUxmin(),
gPad->GetUymin(),
h->GetXaxis()->GetXmin(),
h->GetXaxis()->GetXmax(),
510,"-");
newaxis->SetLabelOffset(-0.03);
newaxis->SetTitle("X[cm]");
newaxis->CenterTitle(1);
newaxis->Draw();
}
void composeTrackAnalysisbyAssociator(string FileListName, int FileNumber) {
if(debug) cout << FileListName << endl;
string theFileName;
ifstream composeFileList;
composeFileList.open(FileListName.c_str());
string OutputPlotNamepreFix = FileListName + "_";
string OutputPlotNameFix = ".png";
unsigned int EventNumber;
unsigned int trackingParticleMatch;
double recTrackPurity;
double recTrackrefMomentum;
double recTrackrefPhi;
double recTrackrefEta;
double recTrackinnerMomentum;
double recTrackinnerPhi;
double recTrackinnerEta;
unsigned int recTrackinnerValid;
double recTrackouterMomentum;
double recTrackouterPhi;
double recTrackouterEta;
unsigned int recTrackouterValid;
double simTrackinnerMomentum;
double simTrackinnerPhi;
double simTrackinnerEta;
unsigned int simTrackinnerMatch;
double simTrackouterMomentum;
double simTrackouterPhi;
double simTrackouterEta;
unsigned int simTrackouterMatch;
double recTrackinnerMomentumofTSOS;
double recTrackinnerPhiofTSOS;
double recTrackinnerEtaofTSOS;
unsigned int recTrackinnerValidofTSOS;
double recTrackouterMomentumofTSOS;
double recTrackouterPhiofTSOS;
double recTrackouterEtaofTSOS;
unsigned int recTrackouterValidofTSOS;
double recTrackimpactMomentumofTSOS;
double recTrackimpactPhiofTSOS;
double recTrackimpactEtaofTSOS;
unsigned int recTrackimpactValidofTSOS;
int recTrackCharge;
double simTrackMomentumPt;
double simTrackPhi;
double simTrackEta;
int simTrackCharge;
TObjArray* myEfficiencyHist = new TObjArray();
TObjArray* myParticleHist = new TObjArray();
TObjArray* mySTAHist = new TObjArray();
TObjArray* myChargeCheckHist = new TObjArray();
TObjArray* myDeltaPtHist = new TObjArray();
TObjArray* myDeltaPhiHist = new TObjArray();
TObjArray* myDeltaEtaHist = new TObjArray();
vector<string> TypeName;
TypeName.clear();
for(int Index = 0; Index < FileNumber; Index++) {
getline(composeFileList, theFileName);
TypeName.push_back(theFileName);
string fullFileName = "data/"+ theFileName + ".root";
if(debug) cout << theFileName << endl;
TFile* RootFile = TFile::Open(fullFileName.c_str());
TTree* T1 = (TTree*)RootFile->Get("ExTree");
T1->SetBranchAddress("EventNumber", &EventNumber);
T1->SetBranchAddress("trackingParticleMatch", &trackingParticleMatch);
T1->SetBranchAddress("recTrackPurity", &recTrackPurity);
T1->SetBranchAddress("recTrackrefMomentum", &recTrackrefMomentum);
T1->SetBranchAddress("recTrackrefPhi", &recTrackrefPhi);
T1->SetBranchAddress("recTrackrefEta", &recTrackrefEta);
T1->SetBranchAddress("recTrackinnerMomentum", &recTrackinnerMomentum);
T1->SetBranchAddress("recTrackinnerPhi", &recTrackinnerPhi);
T1->SetBranchAddress("recTrackinnerEta", &recTrackinnerEta);
T1->SetBranchAddress("recTrackinnerValid", &recTrackinnerValid);
T1->SetBranchAddress("recTrackouterMomentum", &recTrackouterMomentum);
T1->SetBranchAddress("recTrackouterPhi", &recTrackouterPhi);
T1->SetBranchAddress("recTrackouterEta", &recTrackouterEta);
T1->SetBranchAddress("recTrackouterValid", &recTrackouterValid);
T1->SetBranchAddress("simTrackinnerMomentum", &simTrackinnerMomentum);
T1->SetBranchAddress("simTrackinnerPhi", &simTrackinnerPhi);
T1->SetBranchAddress("simTrackinnerEta", &simTrackinnerEta);
T1->SetBranchAddress("simTrackinnerMatch", &simTrackinnerMatch);
T1->SetBranchAddress("simTrackouterMomentum", &simTrackouterMomentum);
T1->SetBranchAddress("simTrackouterPhi", &simTrackouterPhi);
T1->SetBranchAddress("simTrackouterEta", &simTrackouterEta);
T1->SetBranchAddress("simTrackouterMatch", &simTrackouterMatch);
T1->SetBranchAddress("recTrackinnerMomentumofTSOS", &recTrackinnerMomentumofTSOS);
T1->SetBranchAddress("recTrackinnerPhiofTSOS", &recTrackinnerPhiofTSOS);
T1->SetBranchAddress("recTrackinnerEtaofTSOS", &recTrackinnerEtaofTSOS);
T1->SetBranchAddress("recTrackinnerValidofTSOS", &recTrackinnerValidofTSOS);
T1->SetBranchAddress("recTrackouterMomentumofTSOS", &recTrackouterMomentumofTSOS);
T1->SetBranchAddress("recTrackouterPhiofTSOS", &recTrackouterPhiofTSOS);
T1->SetBranchAddress("recTrackouterEtaofTSOS", &recTrackouterEtaofTSOS);
T1->SetBranchAddress("recTrackouterValidofTSOS", &recTrackouterValidofTSOS);
T1->SetBranchAddress("recTrackimpactMomentumofTSOS", &recTrackimpactMomentumofTSOS);
T1->SetBranchAddress("recTrackimpactPhiofTSOS", &recTrackimpactPhiofTSOS);
T1->SetBranchAddress("recTrackimpactEtaofTSOS", &recTrackimpactEtaofTSOS);
T1->SetBranchAddress("recTrackimpactValidofTSOS", &recTrackimpactValidofTSOS);
T1->SetBranchAddress("recTrackCharge", &recTrackCharge);
T1->SetBranchAddress("simTrackMomentumPt", &simTrackMomentumPt);
T1->SetBranchAddress("simTrackPhi", &simTrackPhi);
T1->SetBranchAddress("simTrackEta", &simTrackEta);
T1->SetBranchAddress("simTrackCharge", &simTrackCharge);
string TempHistName;
TempHistName = theFileName + "_Efficiency2simPt";
TH1D* Efficiency2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_Particle2simPt";
TH1D* Particle2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_STA2simPt";
TH1D* STA2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_InverseChargeRato2simPt";
TH1D* InverseChargeRato2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_DeltaPt2simPt";
TH1D* DeltaPt2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_DeltaPhi2simPt";
TH1D* DeltaPhi2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_DeltaEta2simPt";
TH1D* DeltaEta2simPtHist = new TH1D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale);
TempHistName = theFileName + "_MaxPurity2simPt";
TH2D* MaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 6, 0., 1.2);
TempHistName = theFileName + "_Multiplicity2simPt";
TH2D* Multiplicity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 10, 0., 10.);
TempHistName = theFileName + "_ChargeCheck2simPt";
TH2D* ChargeCheck2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 5, -2.5, 2.5);
TempHistName = theFileName + "_simTrackMomentumPtmaxPurity2simPt";
TH2D* simTrackMomentumPtmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, (int)5*PtScale, 0, PtScale);
TempHistName = theFileName + "_simTrackPhimaxPurity2simPt";
TH2D* simTrackPhimaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 314, -PI, PI);
TempHistName = theFileName + "_simTrackEtamaxPurity2simPt";
TH2D* simTrackEtamaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 400, -2.0, 2.0);
TempHistName = theFileName + "_recTrackimpactMomentumofTSOSmaxPurity2simPt";
TH2D* recTrackimpactMomentumofTSOSmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, (int)5*PtScale, 0, PtScale);
TempHistName = theFileName + "_recTrackimpactPhiofTSOSmaxPurity2simPt";
TH2D* recTrackimpactPhiofTSOSmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 314, -PI, PI);
TempHistName = theFileName + "_recTrackimpactEtaofTSOSmaxPurity2simPt";
TH2D* recTrackimpactEtaofTSOSmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 600, -3.0, 3.0);
TempHistName = theFileName + "_recTrackimpactValidofTSOSmaxPurity2simPt";
TH2D* recTrackimpactValidofTSOSmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 2, 0., 2.);
TempHistName = theFileName + "_DeltaPtmaxPurity2simPt";
TH2D* DeltaPtmaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, (int)5*PtScale, -1.*PtScale, PtScale);
TempHistName = theFileName + "_DeltaPhimaxPurity2simPt";
TH2D* DeltaPhimaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 314, -PI, PI);
TempHistName = theFileName + "_DeltaEtamaxPurity2simPt";
TH2D* DeltaEtamaxPurity2simPtHist = new TH2D(TempHistName.c_str(), TempHistName.c_str(), (int)(PtScale/2), 0, PtScale, 400, -2.0, 2.0);
unsigned int trackingParticleMatch_temp;
unsigned int efficiency_temp;
double recTrackPurity_temp;
double recTrackrefMomentum_temp;
double recTrackrefPhi_temp;
double recTrackrefEta_temp;
double recTrackinnerMomentum_temp;
double recTrackinnerPhi_temp;
double recTrackinnerEta_temp;
unsigned int recTrackinnerValid_temp;
double recTrackouterMomentum_temp;
double recTrackouterPhi_temp;
double recTrackouterEta_temp;
unsigned int recTrackouterValid_temp;
double simTrackinnerMomentum_temp;
double simTrackinnerPhi_temp;
double simTrackinnerEta_temp;
unsigned int simTrackinnerMatch_temp;
double simTrackouterMomentum_temp;
double simTrackouterPhi_temp;
double simTrackouterEta_temp;
unsigned int simTrackouterMatch_temp;
double recTrackinnerMomentumofTSOS_temp;
double recTrackinnerPhiofTSOS_temp;
double recTrackinnerEtaofTSOS_temp;
unsigned int recTrackinnerValidofTSOS_temp;
double recTrackouterMomentumofTSOS_temp;
double recTrackouterPhiofTSOS_temp;
double recTrackouterEtaofTSOS_temp;
unsigned int recTrackouterValidofTSOS_temp;
double recTrackimpactMomentumofTSOS_temp;
double recTrackimpactPhiofTSOS_temp;
double recTrackimpactEtaofTSOS_temp;
unsigned int recTrackimpactValidofTSOS_temp;
int recTrackCharge_temp;
double simTrackMomentumPt_temp;
double simTrackPhi_temp;
double simTrackEta_temp;
int simTrackCharge_temp;
int Nentries = T1->GetEntries();
for(int i = 0; i < Nentries; i++) {
T1->GetEntry(i);
if(trackingParticleMatch == 0) {
MaxPurity2simPtHist->Fill(simTrackMomentumPt, 0);
Multiplicity2simPtHist->Fill(simTrackMomentumPt, 0);
int tempParticleBinNumber = Particle2simPtHist->FindBin(simTrackMomentumPt);
double tempParticleBinValue = Particle2simPtHist->GetBinContent(tempParticleBinNumber);
tempParticleBinValue += 1.;
Particle2simPtHist->SetBinContent(tempParticleBinNumber, tempParticleBinValue);
}
else {
efficiency_temp = 1;
trackingParticleMatch_temp = trackingParticleMatch;
recTrackPurity_temp = recTrackPurity;
recTrackrefMomentum_temp = recTrackrefMomentum;
recTrackrefPhi_temp = recTrackrefPhi;
recTrackrefEta_temp = recTrackrefEta;
recTrackinnerMomentum_temp = recTrackinnerMomentum;
recTrackinnerPhi_temp = recTrackinnerPhi;
recTrackinnerEta_temp = recTrackinnerEta;
recTrackinnerValid_temp = recTrackinnerValid;
recTrackouterMomentum_temp = recTrackouterMomentum;
recTrackouterPhi_temp = recTrackouterPhi;
recTrackouterEta_temp = recTrackouterEta;
recTrackouterValid_temp = recTrackouterValid;
simTrackinnerMomentum_temp = simTrackinnerMomentum;
simTrackinnerPhi_temp = simTrackinnerPhi;
simTrackinnerEta_temp = simTrackinnerEta;
simTrackinnerMatch_temp = simTrackinnerMatch;
simTrackouterMomentum_temp = simTrackouterMomentum;
simTrackouterPhi_temp = simTrackouterPhi;
simTrackouterEta_temp = simTrackouterEta;
simTrackouterMatch_temp = simTrackouterMatch;
recTrackinnerMomentumofTSOS_temp = recTrackinnerMomentumofTSOS;
recTrackinnerPhiofTSOS_temp = recTrackinnerPhiofTSOS;
recTrackinnerEtaofTSOS_temp = recTrackinnerEtaofTSOS;
recTrackinnerValidofTSOS_temp = recTrackinnerValidofTSOS;
recTrackouterMomentumofTSOS_temp = recTrackouterMomentumofTSOS;
recTrackouterPhiofTSOS_temp = recTrackouterPhiofTSOS;
recTrackouterEtaofTSOS_temp = recTrackouterEtaofTSOS;
recTrackouterValidofTSOS_temp = recTrackouterValidofTSOS;
recTrackimpactMomentumofTSOS_temp = recTrackimpactMomentumofTSOS;
recTrackimpactPhiofTSOS_temp = recTrackimpactPhiofTSOS;
recTrackimpactEtaofTSOS_temp = recTrackimpactEtaofTSOS;
recTrackimpactValidofTSOS_temp = recTrackimpactValidofTSOS;
recTrackCharge_temp = recTrackCharge;
simTrackMomentumPt_temp = simTrackMomentumPt;
simTrackPhi_temp = simTrackPhi;
simTrackEta_temp = simTrackEta;
simTrackCharge_temp = simTrackCharge;
bool nextStep = true;
while(nextStep) {
i++;
T1->GetEntry(i);
if(trackingParticleMatch <= trackingParticleMatch_temp)
nextStep = false;
else
trackingParticleMatch_temp = trackingParticleMatch;
if(nextStep == true && recTrackPurity_temp < recTrackPurity) {
if(debug) cout << "step another match, trackingParticleMatch_temp: " << trackingParticleMatch_temp << endl;
//trackingParticleMatch_temp = trackingParticleMatch;
recTrackPurity_temp = recTrackPurity;
recTrackrefMomentum_temp = recTrackrefMomentum;
recTrackrefPhi_temp = recTrackrefPhi;
recTrackrefEta_temp = recTrackrefEta;
recTrackinnerMomentum_temp = recTrackinnerMomentum;
recTrackinnerPhi_temp = recTrackinnerPhi;
recTrackinnerEta_temp = recTrackinnerEta;
recTrackinnerValid_temp = recTrackinnerValid;
recTrackouterMomentum_temp = recTrackouterMomentum;
recTrackouterPhi_temp = recTrackouterPhi;
recTrackouterEta_temp = recTrackouterEta;
recTrackouterValid_temp = recTrackouterValid;
simTrackinnerMomentum_temp = simTrackinnerMomentum;
simTrackinnerPhi_temp = simTrackinnerPhi;
simTrackinnerEta_temp = simTrackinnerEta;
simTrackinnerMatch_temp = simTrackinnerMatch;
simTrackouterMomentum_temp = simTrackouterMomentum;
simTrackouterPhi_temp = simTrackouterPhi;
simTrackouterEta_temp = simTrackouterEta;
simTrackouterMatch_temp = simTrackouterMatch;
recTrackinnerMomentumofTSOS_temp = recTrackinnerMomentumofTSOS;
recTrackinnerPhiofTSOS_temp = recTrackinnerPhiofTSOS;
recTrackinnerEtaofTSOS_temp = recTrackinnerEtaofTSOS;
recTrackinnerValidofTSOS_temp = recTrackinnerValidofTSOS;
recTrackouterMomentumofTSOS_temp = recTrackouterMomentumofTSOS;
recTrackouterPhiofTSOS_temp = recTrackouterPhiofTSOS;
recTrackouterEtaofTSOS_temp = recTrackouterEtaofTSOS;
recTrackouterValidofTSOS_temp = recTrackouterValidofTSOS;
recTrackimpactMomentumofTSOS_temp = recTrackimpactMomentumofTSOS;
recTrackimpactPhiofTSOS_temp = recTrackimpactPhiofTSOS;
recTrackimpactEtaofTSOS_temp = recTrackimpactEtaofTSOS;
recTrackimpactValidofTSOS_temp = recTrackimpactValidofTSOS;
recTrackCharge_temp = recTrackCharge;
simTrackMomentumPt_temp = simTrackMomentumPt;
simTrackPhi_temp = simTrackPhi;
simTrackEta_temp = simTrackEta;
simTrackCharge_temp = simTrackCharge;
}
}
i--;
//if(debug) cout << "Filling Multiplicity " << trackingParticleMatch_temp << endl;
MaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackPurity_temp);
Multiplicity2simPtHist->Fill(simTrackMomentumPt_temp, trackingParticleMatch_temp);
ChargeCheck2simPtHist->Fill(simTrackMomentumPt_temp, simTrackCharge_temp*recTrackCharge_temp);
simTrackMomentumPtmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, simTrackMomentumPt_temp);
simTrackPhimaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, simTrackPhi_temp);
simTrackEtamaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, simTrackEta_temp);
recTrackimpactMomentumofTSOSmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactMomentumofTSOS_temp);
recTrackimpactPhiofTSOSmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactPhiofTSOS_temp);
recTrackimpactEtaofTSOSmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactEtaofTSOS_temp);
recTrackimpactValidofTSOSmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactValidofTSOS_temp);
DeltaPtmaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, (recTrackimpactMomentumofTSOS_temp-simTrackMomentumPt_temp)/simTrackMomentumPt_temp);
DeltaPhimaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactPhiofTSOS_temp-simTrackPhi_temp);
DeltaEtamaxPurity2simPtHist->Fill(simTrackMomentumPt_temp, recTrackimpactEtaofTSOS_temp-simTrackEta_temp);
int tempParticleBinNumber = STA2simPtHist->FindBin(simTrackMomentumPt_temp);
double tempParticleBinValue = Particle2simPtHist->GetBinContent(tempParticleBinNumber);
tempParticleBinValue += 1.;
Particle2simPtHist->SetBinContent(tempParticleBinNumber, tempParticleBinValue);
double tempSTABinValue = STA2simPtHist->GetBinContent(tempParticleBinNumber);
tempSTABinValue += 1.;
STA2simPtHist->SetBinContent(tempParticleBinNumber, tempSTABinValue);
}
}
for(int PtIndex = 1; PtIndex <= (int)(PtScale/2); PtIndex++) {
double ParticleBinValue = Particle2simPtHist->GetBinContent(PtIndex);
double STABinValue = STA2simPtHist->GetBinContent(PtIndex);
if(ParticleBinValue == 0.)
ParticleBinValue += 1.;
double EfficiencyBinValue = STABinValue / ParticleBinValue * 100.;
double EfficiencyBinError = sqrt(EfficiencyBinValue * (100. - EfficiencyBinValue) / ParticleBinValue);
cout << ParticleBinValue << ", " << STABinValue << ", " << EfficiencyBinValue << endl;
Efficiency2simPtHist->SetBinContent(PtIndex, EfficiencyBinValue);
Efficiency2simPtHist->SetBinError(PtIndex, EfficiencyBinError);
TH1D* ChargeCheckHist = ChargeCheck2simPtHist->ProjectionY("ChargeCheck", PtIndex, PtIndex, "o");
double ReverseChargeBinValue = ChargeCheckHist->GetBinContent(2);
double CoverseChargeBinValue = ChargeCheckHist->GetBinContent(4);
double TotalChargeBinValue = ReverseChargeBinValue + CoverseChargeBinValue;
if(TotalChargeBinValue == 0.);
TotalChargeBinValue += 1.;
double ReverseChargeRato = ReverseChargeBinValue / TotalChargeBinValue;
InverseChargeRato2simPtHist->SetBinContent(PtIndex, ReverseChargeRato);
TH1D* DeltaPtHist = DeltaPtmaxPurity2simPtHist->ProjectionY("DeltaPt", PtIndex, PtIndex, "o");
double DeltaPtMean = DeltaPtHist->GetMean();
double DeltaPtRMS = DeltaPtHist->GetRMS();
DeltaPt2simPtHist->SetBinContent(PtIndex, DeltaPtMean);
DeltaPt2simPtHist->SetBinError(PtIndex, DeltaPtRMS);
TH1D* DeltaPhiHist = DeltaPhimaxPurity2simPtHist->ProjectionY("DeltaPhi", PtIndex, PtIndex, "o");
double DeltaPhiMean = DeltaPhiHist->GetMean();
double DeltaPhiRMS = DeltaPhiHist->GetRMS();
DeltaPhi2simPtHist->SetBinContent(PtIndex, DeltaPhiMean);
DeltaPhi2simPtHist->SetBinError(PtIndex, DeltaPhiRMS);
TH1D* DeltaEtaHist = DeltaEtamaxPurity2simPtHist->ProjectionY("DeltaEta", PtIndex, PtIndex, "o");
double DeltaEtaMean = DeltaEtaHist->GetMean();
double DeltaEtaRMS = DeltaEtaHist->GetRMS();
DeltaEta2simPtHist->SetBinContent(PtIndex, DeltaEtaMean);
DeltaEta2simPtHist->SetBinError(PtIndex, DeltaEtaRMS);
}
myEfficiencyHist->AddLast(Efficiency2simPtHist);
myParticleHist->AddLast(Particle2simPtHist);
mySTAHist->AddLast(STA2simPtHist);
myChargeCheckHist->AddLast(InverseChargeRato2simPtHist);
myDeltaPtHist->AddLast(DeltaPt2simPtHist);
}
double minX = 0;
double minY = 0;
double maxX = 110;
double maxY = 40;
TCanvas* myCanvas = new TCanvas("Canvas", "Canvas", 800, 600);
myCanvas->cd();
TPad* myPad = new TPad("Pad", "Pad", 0, 0, 1, 1);
myPad->Draw();
myPad->cd();
((TH1D*)(myParticleHist->At(0)))->SetStats(0);
((TH1D*)(myParticleHist->At(0)))->GetXaxis()->SetTitle("simPt/Gev");
((TH1D*)(myParticleHist->At(0)))->GetXaxis()->CenterTitle(1);
((TH1D*)(myParticleHist->At(0)))->Draw();
for(int Index = 0; Index < FileNumber; Index++) {
((TH1D*)(mySTAHist->At(Index)))->SetStats(0);
((TH1D*)(mySTAHist->At(Index)))->SetLineColor(kRed+Index);
((TH1D*)(mySTAHist->At(Index)))->Draw("same");
}
TLegend *STALeg = new TLegend(0.6,0.1,0.9,0.3);
STALeg->SetBorderSize(1);
TString LegKey = "ParticleTrack";
STALeg->AddEntry(myParticleHist->At(0), LegKey, "lpf");
for(int Index = 0; Index < FileNumber; Index++) {
LegKey = TypeName[Index];
STALeg->AddEntry(mySTAHist->At(Index), LegKey, "lpf");
}
STALeg->Draw();
string SaveName = OutputPlotNamepreFix + "_STA2simPt" + OutputPlotNameFix;
myCanvas->SaveAs(SaveName.c_str());
myPad->Clear();
myPad->Update();
double YScale = myPad->GetUymax() / 110.;
((TH1D*)(myEfficiencyHist->At(0)))->GetXaxis()->SetTitle("simPt/Gev");
((TH1D*)(myEfficiencyHist->At(0)))->GetXaxis()->CenterTitle(1);
((TH1D*)(myEfficiencyHist->At(0)))->SetStats(0);
((TH1D*)(myEfficiencyHist->At(0)))->Scale(YScale);
((TH1D*)(myEfficiencyHist->At(0)))->SetLineColor(kRed);
((TH1D*)(myEfficiencyHist->At(0)))->Draw("same,ah");
for(int Index = 1; Index < FileNumber; Index++) {
((TH1D*)(myEfficiencyHist->At(Index)))->SetStats(0);
((TH1D*)(myEfficiencyHist->At(Index)))->Scale(YScale);
((TH1D*)(myEfficiencyHist->At(Index)))->SetLineColor(kRed+Index);
((TH1D*)(myEfficiencyHist->At(Index)))->Draw("same,ah");
}
myPad->Update();
if(debug) cout << "Y: " << myPad->GetUymax() << endl;
double YAxisMinValue=((TH1D*)(myEfficiencyHist->At(0)))->GetYaxis()->GetXmin();
double YAxisMaxValue=((TH1D*)(myEfficiencyHist->At(0)))->GetYaxis()->GetXmax();
int YAxisNBins=((TH1D*)(myEfficiencyHist->At(0)))->GetYaxis()->GetNbins();
TGaxis* YAxis = new TGaxis(myPad->GetUxmin(), myPad->GetUymin(), myPad->GetUxmin(), myPad->GetUymax(), 0, 110, 510, "-R");
YAxis->SetLineColor(kGreen);
YAxis->SetLabelColor(kGreen);
YAxis->SetTitle("Efficiency of STA for simPts");
YAxis->CenterTitle(1);
YAxis->Draw();
double XAxisMinValue=((TH1D*)(myEfficiencyHist->At(0)))->GetXaxis()->GetXmin();
double XAxisMaxValue=((TH1D*)(myEfficiencyHist->At(0)))->GetXaxis()->GetXmax();
int XAxisNBins=((TH1D*)(myEfficiencyHist->At(0)))->GetXaxis()->GetNbins();
TGaxis* XAxis = new TGaxis(myPad->GetUxmin(), myPad->GetUymin(), myPad->GetUxmax(), myPad->GetUymin(), XAxisMinValue, XAxisMaxValue, 510, "+L");
XAxis->SetTitle("simPt/Gev");
XAxis->CenterTitle(1);
XAxis->Draw();
TLegend *EffLeg = new TLegend(0.1,0.9,0.4,1.0);
EffLeg->SetBorderSize(1);
for(int Index = 0; Index < FileNumber; Index++) {
TString LegKey = TypeName[Index];
EffLeg->AddEntry(myEfficiencyHist->At(Index), LegKey, "lpf");
}
EffLeg->Draw();
string SaveName = OutputPlotNamepreFix + "_Eff2simPt" + OutputPlotNameFix;
myCanvas->SaveAs(SaveName.c_str());
((TH1D*)(myDeltaPtHist->At(0)))->SetStats(0);
((TH1D*)(myDeltaPtHist->At(0)))->GetXaxis()->SetTitle("simPt/Gev");
((TH1D*)(myDeltaPtHist->At(0)))->GetXaxis()->CenterTitle(1);
((TH1D*)(myDeltaPtHist->At(0)))->GetYaxis()->SetTitle("deltPt/simPt");
((TH1D*)(myDeltaPtHist->At(0)))->GetYaxis()->CenterTitle(1);
((TH1D*)(myDeltaPtHist->At(0)))->SetLineColor(kRed);
((TH1D*)(myDeltaPtHist->At(0)))->Draw("");
for(int Index = 1; Index < FileNumber; Index++) {
((TH1D*)(myDeltaPtHist->At(Index)))->SetStats(0);
//((TH1D*)(myDeltaPtHist->At(Index)))->GetXaxis()->SetTitle("simPt/Gev");
//((TH1D*)(myDeltaPtHist->At(Index)))->GetXaxis()->CenterTitle(1);
//((TH1D*)(myDeltaPtHist->At(Index)))->GetYaxis()->SetTitle("deltPt/simPt");
//((TH1D*)(myDeltaPtHist->At(Index)))->GetYaxis()->CenterTitle(1);
((TH1D*)(myDeltaPtHist->At(Index)))->SetLineColor(kRed+Index);
((TH1D*)(myDeltaPtHist->At(Index)))->Draw("same");
//SaveName = OutputPlotNamepreFix + TypeName[Index] + "DeltaPt" + OutputPlotNameFix;
//myCanvas->SaveAs(SaveName.c_str());
}
TLegend *PtLeg = new TLegend(0.6,0.8,0.9,0.9);
PtLeg->SetBorderSize(1);
for(int Index = 0; Index < FileNumber; Index++) {
TString LegKey = TypeName[Index];
PtLeg->AddEntry(myDeltaPtHist->At(Index), LegKey, "lpf");
}
PtLeg->Draw();
SaveName = OutputPlotNamepreFix + "_DeltaPt" + OutputPlotNameFix;
myCanvas->SaveAs(SaveName.c_str());
}
void PlotPotential2D( const TString &sim, Int_t time, Int_t zoom=2, Int_t Nbins=2, const TString &options="") {
#ifdef __CINT__
gSystem->Load("libplasma.so");
#endif
PlasmaGlob::Initialize();
// Palettes!
gROOT->Macro("PlasmaPalettes.C");
// Init Units table
PUnits::UnitsTable::Get();
// Load PData
PData *pData = PData::Get(sim.Data());
pData->LoadFileNames(time);
if(!pData->IsInit()) return;
TString opt = options;
// More makeup
gStyle->SetPadGridY(0);
if(opt.Contains("gridx")) {
gStyle->SetPadGridX(1);
}
if(opt.Contains("gridy")) {
gStyle->SetPadGridY(1);
}
// Some plasma constants
Double_t n0 = pData->GetPlasmaDensity();
Double_t omegap = pData->GetPlasmaFrequency();
Double_t timedepth = 1.;
if(omegap!=0.0) timedepth = 1/omegap;
Double_t kp = pData->GetPlasmaK();
Double_t skindepth = 1.;
if(kp!=0.0) skindepth = 1/kp;
Double_t E0 = pData->GetPlasmaE0();
// Some beam properties:
Double_t Ebeam = pData->GetBeamEnergy();
Double_t gamma = pData->GetBeamGamma();
Double_t vbeam = pData->GetBeamVelocity();
cout << Form(" - Bunch gamma = %8.4f", gamma ) << endl;
cout << Form(" - Bunch velocity = %8.4f c", vbeam ) << endl;
// Other parameters
Float_t trapPotential = 1.0 - (1.0/gamma);
cout << Form(" - Trap. potential = %8.4f mc2/e",trapPotential) << endl;
cout << endl;
// Time in OU
Float_t Time = pData->GetRealTime();
// z start of the plasma in normalized units.
Float_t zStartPlasma = pData->GetPlasmaStart()*kp;
// z start of the beam in normalized units.
Float_t zStartBeam = pData->GetBeamStart()*kp;
// z start of the neutral in normalized units.
Float_t zStartNeutral = pData->GetNeutralStart()*kp;
// z end of the neutral in normalized units.
Float_t zEndNeutral = pData->GetNeutralEnd()*kp;
if(opt.Contains("center")) {
Time -= zStartPlasma;
if(opt.Contains("comov")) // Centers on the head of the beam.
Time += zStartBeam;
}
Float_t shiftz = pData->Shift(opt);
// cout << "Shift = " << shiftz << endl;
// Calculate the "axis range" in number of bins. If Nbins==0 a RMS width is taken.
Double_t rms0 = pData->GetBeamRmsY() * kp;
if(pData->IsCyl()) rms0 = pData->GetBeamRmsR() * kp;
Int_t FirstyBin = 0;
Int_t LastyBin = 0;
if(Nbins==0) {
if(rms0>0.0)
Nbins = TMath::Nint(rms0 / pData->GetDX(1));
else
Nbins = 1;
}
// Slice width limits.
if(!pData->IsCyl()) {
FirstyBin = pData->GetNX(1)/2 + 1 - Nbins;
LastyBin = pData->GetNX(1)/2 + Nbins;
} else {
FirstyBin = 1;
LastyBin = Nbins;
}
// ----------------------------------------------------------------------------------
// Get charge density histos
Int_t Nspecies = pData->NSpecies();
TH2F **hDen2D = new TH2F*[Nspecies];
// Get charge density on-axis
TH1F **hDen1D = new TH1F*[Nspecies];
// And electric current (integrated)
TH1F **hCur1D = new TH1F*[Nspecies];
for(Int_t i=0; i<Nspecies; i++) {
hDen2D[i] = NULL;
if(!pData->GetChargeFileName(i))
continue;
cout << Form(" Getting charge density of specie: ") << i << endl;
char hName[24];
sprintf(hName,"hDen2D_%i",i);
hDen2D[i] = (TH2F*) gROOT->FindObject(hName);
if(hDen2D[i]) delete hDen2D[i];
if(!pData->Is3D())
hDen2D[i] = pData->GetCharge(i,opt);
else
hDen2D[i] = pData->GetCharge2DSliceZY(i,-1,Nbins,opt+"avg");
hDen2D[i]->SetName(hName);
hDen2D[i]->GetXaxis()->CenterTitle();
hDen2D[i]->GetYaxis()->CenterTitle();
hDen2D[i]->GetZaxis()->CenterTitle();
if(opt.Contains("comov"))
hDen2D[i]->GetXaxis()->SetTitle("k_{p} #zeta");
else
hDen2D[i]->GetXaxis()->SetTitle("k_{p} z");
if(pData->IsCyl())
hDen2D[i]->GetYaxis()->SetTitle("k_{p} r");
else
hDen2D[i]->GetYaxis()->SetTitle("k_{p} y");
hDen2D[i]->GetZaxis()->SetTitle("n [n_{0}]");
hDen1D[i] = NULL;
hCur1D[i] = NULL;
if(!pData->GetEfieldFileName(i))
continue;
sprintf(hName,"hDen1D_%i",i);
hDen1D[i] = (TH1F*) gROOT->FindObject(hName);
if(hDen1D[i]) delete hDen1D[i];
// 1D histograms
if(pData->Is3D()) {
hDen1D[i] = pData->GetH1SliceZ3D(pData->GetChargeFileName(i)->c_str(),"charge",-1,Nbins,-1,Nbins,opt+"avg");
} else if(pData->IsCyl()) { // Cylindrical: The first bin with r>0 is actually the number 1 (not the 0).
hDen1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",1,Nbins,opt+"avg");
} else { // 2D cartesian
hDen1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",-1,Nbins,opt+"avg");
}
hDen1D[i]->SetName(hName);
// if(hDen1D[i]) delete hDen1D[i];
// hDen1D[i] = (TH1F*) hE2D[i]->ProjectionX(hName,FirstyBin,LastyBin);
// hDen1D[i]->Scale(1.0/(LastyBin-FirstyBin+1));
if(opt.Contains("comov"))
hDen1D[i]->GetXaxis()->SetTitle("#zeta [c/#omega_{p}]");
else
hDen1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
if(i==0)
hDen1D[i]->GetYaxis()->SetTitle("n/n_{0}");
else if(i==1)
hDen1D[i]->GetYaxis()->SetTitle("n_{b}/n_{0}");
else
hDen1D[i]->GetYaxis()->SetTitle("n_{i}/n_{0}");
// Get the current:
if(i==0) continue;
sprintf(hName,"hCur1D_%i",i);
hCur1D[i] = (TH1F*) gROOT->FindObject(hName);
if(hCur1D[i]) delete hCur1D[i];
if(opt.Contains("curr")) {
// To get the current is needed to read in a wider transverse range which includes all the charge.
Int_t NbinsT = 100;
if(pData->Is3D()) {
hCur1D[i] = pData->GetH1SliceZ3D(pData->GetChargeFileName(i)->c_str(),"charge",-1,NbinsT,-1,NbinsT,opt+"int");
} else if(pData->IsCyl()) { // Cylindrical: The first bin with r>0 is actually the number 1 (not the 0).
hCur1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",1,NbinsT,opt+"int");
} else { // 2D cartesian
hCur1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",-1,NbinsT,opt+"int");
}
hCur1D[i]->SetName(hName);
if(opt.Contains("comov")) {
hCur1D[i]->GetXaxis()->SetTitle("#zeta [c/#omega_{p}]");
hCur1D[i]->GetYaxis()->SetTitle("dn/d#zeta [(n_{0}/k_{p}^{3}) (#omega_{p}/c)]");
} else {
hCur1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
hCur1D[i]->GetYaxis()->SetTitle("dn/dz [(n_{0}/k_{p}^{3}) (#omega_{p}/c)]");
}
Int_t NB = hCur1D[i]->GetNbinsX();
Float_t dx = (hCur1D[i]->GetBinLowEdge(1)-hCur1D[i]->GetBinLowEdge(NB+1))/NB;
// hCur1D[i]->Scale(dx);
Float_t Charge = hCur1D[i]->Integral() * dx;
cout << Form(" Integrated charge of specie %3i = %8.4f n0 * kp^-3",i,Charge) << endl;
}
}
// Get electric fields 2D
const Int_t Nfields = 3;
TH2F **hE2D = new TH2F*[Nfields];
TH1F **hE1D = new TH1F*[Nfields];
TH2F *hV2D = NULL;
TH1F *hV1D = NULL;
for(Int_t i=0; i<Nfields; i++) {
hE2D[i] = NULL;
hE1D[i] = NULL;
if(!pData->GetEfieldFileName(i))
continue;
cout << Form(" Getting electric field number ") << i+1 << endl;
char hName[24];
sprintf(hName,"hE2D_%i",i);
hE2D[i] = (TH2F*) gROOT->FindObject(hName);
if(hE2D[i]) delete hE2D[i];
if(!pData->Is3D())
hE2D[i] = pData->GetEField(i,opt);
else
hE2D[i] = pData->GetEField2DSliceZY(i,-1,Nbins,opt+"avg");
hE2D[i]->SetName(hName);
hE2D[i]->GetXaxis()->CenterTitle();
hE2D[i]->GetYaxis()->CenterTitle();
hE2D[i]->GetZaxis()->CenterTitle();
if(opt.Contains("comov"))
hE2D[i]->GetXaxis()->SetTitle("k_{p} #zeta");
else
hE2D[i]->GetXaxis()->SetTitle("k_{p} z");
if(pData->IsCyl())
hE2D[i]->GetYaxis()->SetTitle("k_{p} r");
else
hE2D[i]->GetYaxis()->SetTitle("k_{p} y");
if(i==0)
hE2D[i]->GetZaxis()->SetTitle("E_{z}/E_{0}");
else if(i==1)
hE2D[i]->GetZaxis()->SetTitle("E_{y}/E_{0}");
else if(i==2)
hE2D[i]->GetZaxis()->SetTitle("E_{x}/E_{0}");
sprintf(hName,"hE1D_%i",i);
hE1D[i] = (TH1F*) gROOT->FindObject(hName);
if(hE1D[i]) delete hE1D[i];
// 1D histograms
char nam[3];
sprintf(nam,"e%i",i+1);
if(pData->Is3D()) {
if(i==0)
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,-1,Nbins,opt+"avg");
else
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,-Nbins,Nbins,opt+"avg");
} else if(pData->IsCyl()) { // Cylindrical: The first bin with r>0 is actually the number 1 (not the 0).
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,1,Nbins,opt+"avg");
} else { // 2D cartesian
if(i==0)
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,opt+"avg");
else
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,opt+"avg");
}
hE1D[i]->SetName(hName);
if(opt.Contains("comov"))
hE1D[i]->GetXaxis()->SetTitle("#zeta [c/#omega_{p}]");
else
hE1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
if(i==0)
hE1D[i]->GetYaxis()->SetTitle("E_{z} [E_{0}]");
else if(i==1)
hE1D[i]->GetYaxis()->SetTitle("E_{y} [E_{0}]");
else if(i==2)
hE1D[i]->GetYaxis()->SetTitle("E_{x} [E_{0}]");
// Alternative
// if(hE1D[i]) delete hE1D[i];
// hE1D[i] = (TH1F*) hE2D[i]->ProjectionX(hName,FirstyBin,LastyBin);
// hE1D[i]->Scale(1.0/(LastyBin-FirstyBin+1));
if(i==0) {
Int_t NbinsX = hE2D[i]->GetNbinsX();
Int_t NbinsY = hE2D[i]->GetNbinsY();
Float_t dx = pData->GetDX(0);
sprintf(hName,"hV2D");
hV2D = (TH2F*) hE2D[i]->Clone(hName);
hV2D->Reset();
sprintf(hName,"hV1D");
hV1D = (TH1F*) hE1D[i]->Clone(hName);
hV1D->Reset();
for(Int_t j=NbinsY; j>0; j--) {
Double_t integral = 0.0;
for(Int_t k=NbinsX; k>0; k--) {
integral += hE2D[i]->GetBinContent(k,j) * dx;
hV2D->SetBinContent(k,j,integral);
}
}
Double_t integral = 0.0;
for(Int_t k=NbinsX; k>0; k--) {
integral += hE1D[i]->GetBinContent(k) * dx;
hV1D->SetBinContent(k,integral);
}
}
}
// Now, combine the electric field components into the total |E|
// and calculate ionization probability for He:
// Outter Helium electron
Double_t Eion0 = 24.59 * PUnits::eV;
Double_t Z = 1;
TH2F *hETotal2D = (TH2F*) hE2D[0]->Clone("hETotal2D");
hETotal2D->Reset();
TH2F *hIonProb2D = (TH2F*) hE2D[0]->Clone("hIonProb2D");
hIonProb2D->Reset();
TH1F *hETotal1D = (TH1F*) hE1D[0]->Clone("hETotal1D");
hETotal1D->Reset();
TH1F *hIonProb1D = (TH1F*) hE1D[0]->Clone("hIonProb1D");
hIonProb1D->Reset();
{
Int_t NbinsX = hE2D[0]->GetNbinsX();
Int_t NbinsY = hE2D[0]->GetNbinsY();
for(Int_t j=0; j<NbinsX; j++) {
for(Int_t k=0; k<NbinsY; k++) {
Double_t E1 = hE2D[0]->GetBinContent(j,k);
Double_t E2 = hE2D[1]->GetBinContent(j,k);
Double_t E3 = hE2D[2]->GetBinContent(j,k);
Double_t E = TMath::Sqrt(E1*E1+E2*E2+E3*E3);
hETotal2D->SetBinContent(j,k,E);
E *= E0;
// Double_t IonProb = (PFunc::ADK(E,Eion0,Z,l,m)/PUnits::atomictime)*PUnits::femtosecond;
Double_t IonProb = PFunc::ADK_ENG(E,Eion0,Z) * PUnits::femtosecond;
// if(IonProb>1) IonProb = 1.0;
// cout << "Ion prob = " << IonProb << endl;
hIonProb2D->SetBinContent(j,k,IonProb);
}
Double_t E1 = hE1D[0]->GetBinContent(j);
Double_t E2 = hE1D[1]->GetBinContent(j);
Double_t E3 = hE1D[2]->GetBinContent(j);
Double_t E = TMath::Sqrt(E1*E1+E2*E2+E3*E3);
hETotal1D->SetBinContent(j,E);
E *= E0;
// Double_t IonProb = (PFunc::ADK(E,Eion0,Z,l,m)/PUnits::atomictime)*PUnits::femtosecond;
Double_t IonProb = PFunc::ADK_ENG(E,Eion0,Z) * PUnits::femtosecond;
// cout << "Ion prob = " << IonProb << endl;
hIonProb1D->SetBinContent(j,IonProb);
}
}
hETotal2D->GetZaxis()->SetTitle("E [E_{0}]");
hIonProb2D->GetZaxis()->SetTitle("W_{ADK} [fs^{-1}]");
hETotal1D->GetYaxis()->SetTitle("E [E_{0}]");
hIonProb1D->GetYaxis()->SetTitle("W_{ADK} [fs^{-1}]");
// Tunning the Histograms
// ---------------------
// Chaning to user units:
// --------------------------
if(opt.Contains("units") && n0) {
for(Int_t i=0; i<Nspecies; i++) {
if(!hDen2D[i]) continue;
Int_t NbinsX = hDen2D[i]->GetNbinsX();
Float_t xMin = skindepth * hDen2D[i]->GetXaxis()->GetXmin() / PUnits::um;
Float_t xMax = skindepth * hDen2D[i]->GetXaxis()->GetXmax() / PUnits::um;
Int_t NbinsY = hDen2D[i]->GetNbinsY();
Float_t ymin = skindepth * hDen2D[i]->GetYaxis()->GetXmin() / PUnits::um;
Float_t ymax = skindepth * hDen2D[i]->GetYaxis()->GetXmax() / PUnits::um;
hDen2D[i]->SetBins(NbinsX,xMin,xMax,NbinsY,ymin,ymax);
// for(Int_t j=0;j<hDen2D[i]->GetNbinsX();j++) {
// for(Int_t k=0;k<hDen2D[i]->GetNbinsY();k++) {
// hDen2D[i]->SetBinContent(j,k, hDen2D[i]->GetBinContent(j,k) * n0 / (1e17/PUnits::cm3) );
// }
// }
if(pData->IsCyl())
hDen2D[i]->GetYaxis()->SetTitle("r [#mum]");
else
hDen2D[i]->GetYaxis()->SetTitle("y [#mum]");
if(opt.Contains("comov"))
hDen2D[i]->GetXaxis()->SetTitle("#zeta [#mum]");
else
hDen2D[i]->GetXaxis()->SetTitle("z [#mum]");
// if(i==0)
// hDen2D[i]->GetZaxis()->SetTitle("n_{e} [10^{17}/cm^{3}]");
// else if(i==1)
// hDen2D[i]->GetZaxis()->SetTitle("n_{b} [10^{17}/cm^{3}]");
// else
// hDen2D[i]->GetZaxis()->SetTitle("n_{i} [10^{17}/cm^{3}]");
hDen1D[i]->SetBins(NbinsX,xMin,xMax);
// for(Int_t j=0;j<hDen1D[i]->GetNbinsX();j++) {
// hDen1D[i]->SetBinContent(j, hDen1D[i]->GetBinContent(j) * n0 / (1e17/PUnits::cm3) );
// }
if(opt.Contains("comov"))
hDen1D[i]->GetXaxis()->SetTitle("#zeta [#mum]");
else
hDen1D[i]->GetXaxis()->SetTitle("z [#mum]");
if(hCur1D[i]) {
hCur1D[i]->SetBins(NbinsX,xMin,xMax);
Double_t binSize = (xMax - xMin)/NbinsX; // bin size in um.
Double_t dV = skindepth * skindepth * skindepth;
Double_t lightspeed = PConst::c_light / (PUnits::um/PUnits::femtosecond);
hCur1D[i]->Scale(TMath::Abs(n0 * dV * (PConst::ElectronCharge/PUnits::picocoulomb) * (kp * PConst::c_light * PUnits::femtosecond)));
hCur1D[i]->GetYaxis()->SetTitle("I[kA]");
hCur1D[i]->GetYaxis()->SetTitle("");
if(opt.Contains("comov"))
hCur1D[i]->GetXaxis()->SetTitle("#zeta [#mum]");
else
hCur1D[i]->GetXaxis()->SetTitle("z [#mum]");
Float_t Charge = hCur1D[i]->Integral() * (binSize / lightspeed);
cout << Form(" Integrated charge of specie %3i = %8f pC",i,Charge) << endl;
}
}
for(Int_t i=0; i<Nfields; i++) {
Int_t NbinsX = hE2D[i]->GetNbinsX();
Float_t xMin = skindepth * hE2D[i]->GetXaxis()->GetXmin() / PUnits::um;
Float_t xMax = skindepth * hE2D[i]->GetXaxis()->GetXmax() / PUnits::um;
Int_t NbinsY = hE2D[i]->GetNbinsY();
Float_t ymin = skindepth * hE2D[i]->GetYaxis()->GetXmin() / PUnits::um;
Float_t ymax = skindepth * hE2D[i]->GetYaxis()->GetXmax() / PUnits::um;
hE2D[i]->SetBins(NbinsX,xMin,xMax,NbinsY,ymin,ymax);
hE1D[i]->SetBins(NbinsX,xMin,xMax);
for(Int_t j=0; j<hE2D[i]->GetNbinsX(); j++) {
for(Int_t k=0; k<hE2D[i]->GetNbinsY(); k++) {
hE2D[i]->SetBinContent(j,k, hE2D[i]->GetBinContent(j,k) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
hE1D[i]->SetBinContent(j, hE1D[i]->GetBinContent(j) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
if(pData->IsCyl())
hE2D[i]->GetYaxis()->SetTitle("r [#mum]");
else
hE2D[i]->GetYaxis()->SetTitle("y [#mum]");
if(opt.Contains("comov"))
hE2D[i]->GetXaxis()->SetTitle("#zeta [#mum]");
else
hE2D[i]->GetXaxis()->SetTitle("z [#mum]");
if(i==0)
hE2D[i]->GetZaxis()->SetTitle("E_{z} [GV/m]");
else if(i==1)
hE2D[i]->GetZaxis()->SetTitle("E_{y} [GV/m]");
else if(i==2)
hE2D[i]->GetZaxis()->SetTitle("E_{x} [GV/m]");
if(opt.Contains("comov"))
hE1D[i]->GetXaxis()->SetTitle("#zeta [mm]");
else
hE1D[i]->GetXaxis()->SetTitle("z [mm]");
if(i==0)
hE1D[i]->GetYaxis()->SetTitle("E_{z} [GV/m]");
else if(i==1)
hE1D[i]->GetYaxis()->SetTitle("E_{y} [GV/m]");
else if(i==2)
hE1D[i]->GetYaxis()->SetTitle("E_{x} [GV/m]");
if(i==0) {
hV2D->SetBins(NbinsX,xMin,xMax,NbinsY,ymin,ymax);
hETotal2D->SetBins(NbinsX,xMin,xMax,NbinsY,ymin,ymax);
hIonProb2D->SetBins(NbinsX,xMin,xMax,NbinsY,ymin,ymax);
hV1D->SetBins(NbinsX,xMin,xMax);
hETotal1D->SetBins(NbinsX,xMin,xMax);
hIonProb1D->SetBins(NbinsX,xMin,xMax);
for(Int_t j=0; j<NbinsX; j++) {
for(Int_t k=0; k<NbinsY; k++) {
hV2D->SetBinContent(j,k, hV2D->GetBinContent(j,k) * E0 * skindepth / (PUnits::MV));
hETotal2D->SetBinContent(j,k, hETotal2D->GetBinContent(j,k) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
hV1D->SetBinContent(j, hV1D->GetBinContent(j) * ( E0 * skindepth / (PUnits::MV) ) );
hETotal1D->SetBinContent(j, hETotal1D->GetBinContent(j) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
if(pData->IsCyl()) {
hV2D->GetYaxis()->SetTitle("r [#mum]");
hETotal2D->GetYaxis()->SetTitle("r [#mum]");
} else {
hV2D->GetYaxis()->SetTitle("y [#mum]");
hETotal2D->GetYaxis()->SetTitle("y [#mum]");
}
if(opt.Contains("comov")) {
hV2D->GetXaxis()->SetTitle("#zeta [#mum]");
hV1D->GetXaxis()->SetTitle("#zeta [#mum]");
hETotal2D->GetXaxis()->SetTitle("#zeta [#mum]");
hETotal1D->GetXaxis()->SetTitle("#zeta [#mum]");
} else {
hV2D->GetXaxis()->SetTitle("z [#mum]");
hV2D->GetXaxis()->SetTitle("z [#mum]");
hETotal2D->GetXaxis()->SetTitle("z [#mum]");
hETotal1D->GetXaxis()->SetTitle("z [#mum]");
}
hV2D->GetZaxis()->SetTitle("#Psi-#Psi_{t} [MV]");
hV1D->GetYaxis()->SetTitle("#Psi-#Psi_{t} [MV]");
hETotal2D->GetZaxis()->SetTitle("E [GV/m]");
hETotal1D->GetYaxis()->SetTitle("E [GV/m]");
}
}
}
// --------------------------------------------------- Vertical Zoom ------------
Float_t yRange = (hDen2D[0]->GetYaxis()->GetXmax() - hDen2D[0]->GetYaxis()->GetXmin())/zoom;
Float_t midPoint = (hDen2D[0]->GetYaxis()->GetXmax() + hDen2D[0]->GetYaxis()->GetXmin())/2.;
Float_t yMin = midPoint-yRange/2;
Float_t yMax = midPoint+yRange/2;
if(pData->IsCyl()) {
yMin = pData->GetXMin(1);
yMax = yRange;
}
for(Int_t i=0; i<Nspecies; i++) {
if(!hDen2D[i]) continue;
hDen2D[i]->GetYaxis()->SetRangeUser(yMin,yMax);
}
for(Int_t i=0; i<Nfields; i++) {
if(!hE2D[i]) continue;
hE2D[i]->GetYaxis()->SetRangeUser(yMin,yMax);
}
hETotal2D->GetYaxis()->SetRangeUser(yMin,yMax);
Float_t xMin = hDen2D[0]->GetXaxis()->GetXmin();
Float_t xMax = hDen2D[0]->GetXaxis()->GetXmax();
Float_t xRange = xMax - xMin;
// ------------- z Zoom --------------------------------- Plasma palette -----------
// Set the range of the plasma charge density histogram for maximum constrast
// using a dynamic palette wich adjust the nominal value to a certain color.
Float_t density = 1;
Float_t Base = density;
Float_t *Max = new Float_t[Nspecies];
Float_t *Min = new Float_t[Nspecies];
for(Int_t i=0; i<Nspecies; i++) {
if(!hDen2D[i]) continue;
Max[i] = hDen2D[i]->GetMaximum();
Min[i] = 1.01E-1 * Base;
if(i==1) Min[i] = 1.01E-1 * Base;
if(i==2) Min[i] = 1.01E-4 * Base;
hDen2D[i]->GetZaxis()->SetRangeUser(Min[i],Max[i]);
}
// Dynamic plasma palette
const Int_t plasmaDNRGBs = 3;
const Int_t plasmaDNCont = 64;
Float_t basePos = 0.5;
if(Max[0]!=Min[0]) {
if(opt.Contains("logz")) {
Float_t a = 1.0/(TMath::Log10(Max[0])-TMath::Log10(Min[0]));
Float_t b = TMath::Log10(Min[0]);
basePos = a*(TMath::Log10(Base) - b);
} else {
basePos = (1.0/(Max[0]-Min[0]))*(Base - Min[0]);
}
}
Double_t plasmaDStops[plasmaDNRGBs] = { 0.00, basePos, 1.00 };
Double_t plasmaDRed[plasmaDNRGBs] = { 0.99, 0.90, 0.00 };
Double_t plasmaDGreen[plasmaDNRGBs] = { 0.99, 0.90, 0.00 };
Double_t plasmaDBlue[plasmaDNRGBs] = { 0.99, 0.90, 0.00 };
PPalette * plasmaPalette = (PPalette*) gROOT->FindObject("plasma");
plasmaPalette->CreateGradientColorTable(plasmaDNRGBs, plasmaDStops,
plasmaDRed, plasmaDGreen, plasmaDBlue, plasmaDNCont);
// Change the range of z axis for the fields to be symmetric.
Float_t *Emax = new Float_t[Nfields];
Float_t *Emin = new Float_t[Nfields];
for(Int_t i=0; i<Nfields; i++) {
Emax[i] = hE2D[i]->GetMaximum();
Emin[i] = hE2D[i]->GetMinimum();
if(Emax[i] > TMath::Abs(Emin[i]))
Emin[i] = -Emax[i];
else
Emax[i] = -Emin[i];
hE2D[i]->GetZaxis()->SetRangeUser(Emin[i],Emax[i]);
}
// Potential
if(opt.Contains("units")) {
trapPotential *= ( E0 * skindepth / (PUnits::MV) );
}
Float_t Vmin = hV1D->GetMinimum();
{ // Shift potential
Int_t NbinsX = hV2D->GetNbinsX();
Int_t NbinsY = hV2D->GetNbinsY();
for(Int_t j=0; j<NbinsX; j++) {
for(Int_t k=0; k<NbinsY; k++) {
hV2D->SetBinContent(j,k, hV2D->GetBinContent(j,k) - Vmin -trapPotential);
}
hV1D->SetBinContent(j, hV1D->GetBinContent(j) - Vmin -trapPotential);
}
}
Vmin = hV1D->GetMinimum();
Float_t Vmax = hV1D->GetMaximum();
// Dynamic potential palette
const Int_t potPNRGBs = 5;
const Int_t potPNCont = 64;
Float_t zeroPos = -Vmin/(Vmax-Vmin);
Double_t potPStops[potPNRGBs] = { 0.00, zeroPos-3.0/potPNCont,zeroPos, zeroPos+3.0/potPNCont, 1.00 };
Double_t potPRed[potPNRGBs] = { 0.518, 0.965, 0.90, 0.498, 0.106 };
Double_t potPGreen[potPNRGBs] = { 0.078, 0.925, 0.90, 0.718, 0.078 };
Double_t potPBlue[potPNRGBs] = { 0.106, 0.353, 0.90, 0.780, 0.518 };
PPalette * potentialPalette = (PPalette*) gROOT->FindObject("rbow2inv");
potentialPalette->CreateGradientColorTable(potPNRGBs, potPStops,
potPRed, potPGreen, potPBlue, potPNCont);
// Extract contours
TCanvas* c = new TCanvas("c","Contour List",0,0,600,600);
c->cd();
// Potential
TH2F *hV2Dc = (TH2F*) hV2D->Clone("hV2Dc");
const Int_t Ncontours = 25;
Double_t contours[Ncontours];
for(Int_t i=0; i<Ncontours; i++) {
contours[i] = i*(trapPotential/5.0) - trapPotential;
}
hV2Dc->SetContour(Ncontours, contours);
hV2Dc->Draw("cont list");
c->Update();
TObjArray *contsV2D = (TObjArray*) gROOT->GetListOfSpecials()->FindObject("contours");
TClonesArray graphsV2D("TGraph",Ncontours);
{
Int_t ncontours = contsV2D->GetSize();
TList* clist = NULL;
Int_t nGraphs = 0;
TGraph *gr = NULL;
for(Int_t i = 0; i < ncontours; i++) {
if(i==0) continue;
clist = (TList*) contsV2D->At(i);
for(Int_t j = 0 ; j < clist->GetSize(); j++) {
gr = (TGraph*) clist->At(j);
if(!gr) continue;
gr->SetLineWidth(1);
gr->SetLineColor(kGray+1);
if( !((i)%5) ) {
gr->SetLineWidth(2);
gr->SetLineColor(kGray+2);
}
new(graphsV2D[nGraphs]) TGraph(*gr) ;
nGraphs++;
}
}
}
// Ion probability
hIonProb2D->GetZaxis()->SetRangeUser(0.00501,80);
TH2F *hIonProb2Dc = (TH2F*) hIonProb2D->Clone("hIonProb2Dc");
const Int_t NcontI = 4;
Double_t contI[NcontI] = {0.01,0.1,1.0,10.0};
hIonProb2Dc->SetContour(NcontI, contI);
hIonProb2Dc->Draw("cont list");
c->Update();
TObjArray *contsI2D = (TObjArray*) gROOT->GetListOfSpecials()->FindObject("contours");
TClonesArray graphsI2D("TGraph",NcontI);
{
Int_t ncontours = contsI2D->GetSize();
TList* clist = NULL;
Int_t nGraphs = 0;
TGraph *gr = NULL;
for(Int_t i = 0; i < ncontours; i++) {
clist = (TList*) contsI2D->At(i);
for(Int_t j = 0 ; j < clist->GetSize(); j++) {
gr = (TGraph*) clist->At(j);
if(!gr) continue;
if( !(i%2) ) {
gr->SetLineWidth(1);
gr->SetLineStyle(2);
gr->SetLineColor(kOrange-3);
} else {
gr->SetLineWidth(1);
gr->SetLineStyle(1);
gr->SetLineColor(kOrange-3);
}
new(graphsI2D[nGraphs]) TGraph(*gr) ;
nGraphs++;
}
}
}
// "Axis range" in Osiris units:
Double_t ylow = hDen2D[0]->GetYaxis()->GetBinLowEdge(FirstyBin);
Double_t yup = hDen2D[0]->GetYaxis()->GetBinUpEdge(LastyBin);
Double_t xmin = hDen2D[0]->GetXaxis()->GetXmin();
Double_t xmax = hDen2D[0]->GetXaxis()->GetXmax();
TLine *lineYzero = new TLine(xmin,0.0,xmax,0.0);
lineYzero->SetLineColor(kGray+2);
lineYzero->SetLineStyle(2);
TLine *lineYup = new TLine(xmin,yup,xmax,yup);
lineYup->SetLineColor(kGray+1);
lineYup->SetLineStyle(2);
TLine *lineYdown = new TLine(xmin,ylow,xmax,ylow);
lineYdown->SetLineColor(kGray+1);
lineYdown->SetLineStyle(2);
zStartPlasma -= shiftz;
zStartNeutral -= shiftz;
zEndNeutral -= shiftz;
if(opt.Contains("units")) {
zStartPlasma *= skindepth / PUnits::um;
zStartNeutral *= skindepth / PUnits::um;
zEndNeutral *= skindepth / PUnits::um;
}
// cout << "Start plasma = " << zStartPlasma << endl;
TLine *lineStartPlasma = new TLine(zStartPlasma,yMin,zStartPlasma,yMax);
lineStartPlasma->SetLineColor(kGray+2);
lineStartPlasma->SetLineStyle(2);
lineStartPlasma->SetLineWidth(3);
// cout << "Start plasma = " << zStartNeutral << endl;
TLine *lineStartNeutral = new TLine(zStartNeutral,yMin,zStartNeutral,yMax);
lineStartNeutral->SetLineColor(kGray+1);
lineStartNeutral->SetLineStyle(2);
lineStartNeutral->SetLineWidth(3);
// cout << "End plasma = " << zEndNeutral << endl;
TLine *lineEndNeutral = new TLine(zEndNeutral,yMin,zEndNeutral,yMax);
lineEndNeutral->SetLineColor(kGray+1);
lineEndNeutral->SetLineStyle(2);
lineEndNeutral->SetLineWidth(3);
// Plotting
// -----------------------------------------------
// Canvas setup
TCanvas *C = new TCanvas("C","2D Charge density and Electric field",750,666);
// Palettes setup
TExec *exPlasma = new TExec("exPlasma","plasmaPalette->cd();");
TExec *exElec = new TExec("exElec","redelectronPalette->cd();");
TExec *exHot = new TExec("exHot","hotPalette->cd();");
TExec *exField = new TExec("exField","rbow2Palette->cd();");
TExec *exFieldT = new TExec("exFieldT","redPalette->cd();");
TExec *exIonP = new TExec("exIonP","redPalette->cd();");
TExec *exPot = new TExec("exPot","rbow2invPalette->cd();");
// Actual Plotting!
// ------------------------------------------------------------
// Output file
TString fOutName = Form("./%s/Plots/Potential2D/Potential2D",pData->GetPath().c_str());
fOutName += Form("-%s_%i",pData->GetName(),time);
// Setup Pad layout:
Float_t lMargin = 0.15;
Float_t rMargin = 0.18;
Float_t bMargin = 0.15;
Float_t tMargin = 0.04;
Float_t factor = 1.0;
PlasmaGlob::CanvasAsymPartition(C,2,lMargin,rMargin,bMargin,tMargin,factor);
TPad *pad[2];
TString sLabels[] = {"(a)","(b)"};
// Text objects
TPaveText **textLabel = new TPaveText*[2];
C->cd(0);
char pname[16];
sprintf(pname,"pad_%i",1);
pad[0] = (TPad*) gROOT->FindObject(pname);
pad[0]->Draw();
pad[0]->cd(); // <---------------------------------------------- Top Plot ---------
if(opt.Contains("logz")) {
pad[0]->SetLogz(1);
} else {
pad[0]->SetLogz(0);
}
pad[0]->SetFrameLineWidth(3);
pad[0]->SetTickx(1);
// Re-range:
for(Int_t i=0; i<Nspecies; i++) {
if(!hDen2D[i]) continue;
hDen2D[i]->GetYaxis()->SetRangeUser(yMin -(factor-1)*yRange, yMax);
}
TH2F *hFrame = (TH2F*) gROOT->FindObject("hFrame1");
if(hFrame) delete hFrame;
hFrame = (TH2F*) hDen2D[0]->Clone("hFrame1");
hFrame->Reset();
hFrame->SetLabelFont(42,"xyz");
hFrame->SetTitleFont(42,"xyz");
hFrame->GetYaxis()->SetNdivisions(505);
hFrame->GetYaxis()->SetLabelSize(0.085);
hFrame->GetYaxis()->SetTitleSize(0.09);
hFrame->GetYaxis()->SetTitleOffset(0.7);
hFrame->GetYaxis()->SetTickLength(0.02);
hFrame->GetXaxis()->SetLabelOffset(999.);
hFrame->GetXaxis()->SetTitleOffset(999.);
hFrame->GetXaxis()->SetTickLength(0.04);
// Frame asymmetry:
hFrame->Draw("col");
// hDen2D[0]->GetZaxis()->SetNdivisions(505);
// Injected electrons if any
if(Nspecies>=3) {
if(hDen2D[2]) {
exHot->Draw();
hDen2D[2]->Draw("colz same");
}
}
// Plasma
hDen2D[0]->GetZaxis()->SetTitleFont(42);
exPlasma->Draw();
hDen2D[0]->Draw("colz same");
// Beam driver.
if(hDen2D[1]) {
// hDen2D[1]->GetZaxis()->SetNdivisions(505);
exElec->Draw();
hDen2D[1]->Draw("colz same");
}
{
TGraph *gr = (TGraph*) graphsV2D.At(4);
gr->Draw("C");
}
{
TGraph *gr = (TGraph*) graphsI2D.At(1);
gr->Draw("C");
}
if(opt.Contains("1dline")) {
lineYzero->Draw();
lineYdown->Draw();
lineYup->Draw();
}
if(opt.Contains("sline")) {
if(zStartPlasma>xmin && zStartPlasma<xmax)
lineStartPlasma->Draw();
if(zStartNeutral>xmin && zStartNeutral<xmax)
lineStartNeutral->Draw();
if(zEndNeutral>xmin && zEndNeutral<xmax)
lineEndNeutral->Draw();
}
// lineYdown->Draw();
// lineYup->Draw();
// Palettes re-arrangement
pad[0]->Update();
Float_t y1 = pad[0]->GetBottomMargin();
Float_t y2 = 1 - pad[0]->GetTopMargin();
Float_t x1 = pad[0]->GetLeftMargin();
Float_t x2 = 1 - pad[0]->GetRightMargin();
TPaletteAxis *palette = NULL;
if(Nspecies>=3) {
if(hDen2D[2]) {
palette = (TPaletteAxis*)hDen2D[2]->GetListOfFunctions()->FindObject("palette");
}
}
if(palette) {
palette->SetY2NDC(y2 - 0.00);
palette->SetY1NDC(0.66*(y1+y2) + 0.00);
palette->SetX1NDC(x2 + 0.005);
palette->SetX2NDC(x2 + 0.03);
// palette->SetTitleFont(42);
// palette->SetTitleOffset(0.85);
palette->SetTitleOffset(999.9);
palette->SetTitleSize(0.075);
palette->SetLabelFont(42);
palette->SetLabelSize(0.075);
palette->SetLabelOffset(0.001);
palette->SetBorderSize(2);
palette->SetLineColor(1);
}
palette = (TPaletteAxis*)hDen2D[0]->GetListOfFunctions()->FindObject("palette");
if(palette) {
palette->SetY2NDC(0.66*(y1+y2) - 0.00);
palette->SetY1NDC(0.33*(y1+y2) + 0.00);
palette->SetX1NDC(x2 + 0.005);
palette->SetX2NDC(x2 + 0.03);
// palette->SetTitleFont(42);
palette->SetTitleOffset(0.80);
palette->SetTitleSize(0.075);
palette->SetLabelFont(42);
palette->SetLabelSize(0.075);
palette->SetLabelOffset(0.001);
palette->SetBorderSize(2);
palette->SetLineColor(1);
}
palette = (TPaletteAxis*)hDen2D[1]->GetListOfFunctions()->FindObject("palette");
if(palette) {
palette->SetY2NDC(0.33*(y1+y2) - 0.00);
palette->SetY1NDC(y1 + 0.00);
palette->SetX1NDC(x2 + 0.005);
palette->SetX2NDC(x2 + 0.03);
//palette->SetTitleFont(42);
//palette->SetTitleOffset(0.85);
palette->SetTitleOffset(999.9);
palette->SetTitleSize(0.075);
palette->SetLabelFont(42);
palette->SetLabelSize(0.075);
palette->SetLabelOffset(0.001);
palette->SetBorderSize(2);
palette->SetLineColor(1);
}
// 1D charge density plots:
Float_t yaxismin = pad[0]->GetUymin();
Float_t yaxismax = pad[0]->GetUymin() + 0.33*(pad[0]->GetUymax() - pad[0]->GetUymin()) - 0.00;
Float_t denmin = Min[1];
Float_t denmax = Max[1];
if(opt.Contains("logz")) {
denmin = TMath::Log10(denmin);
denmax = TMath::Log10(denmax);
}
Float_t curmin = 0.0;
Float_t curmax = 0.0;
if(opt.Contains("curr")) {
curmin = 0.0;
curmax = hCur1D[1]->GetMaximum();
cout << Form(" Maximum driver current = %6.2f kA ", curmax) << endl ;
if(Nspecies>=3)
if(hCur1D[2])
cout << Form(" Maximum witness current = %6.2f kA ", hCur1D[2]->GetMaximum()) << endl ;
// Round for better plotting
curmax = 0.1*TMath::Nint(curmax*10);
}
for(Int_t i=0; i<Nspecies; i++) {
if(!hDen1D[i]) continue;
Float_t slope = (yaxismax - yaxismin)/(denmax - denmin);
for(Int_t j=0; j<hDen1D[i]->GetNbinsX(); j++) {
Float_t content = hDen1D[i]->GetBinContent(j+1);
if(opt.Contains("logz")) content = TMath::Log10(content);
if(content<denmin)
hDen1D[i]->SetBinContent(j+1,yaxismin);
else
hDen1D[i]->SetBinContent(j+1,(content - denmin) * slope + yaxismin);
}
if(hCur1D[i]) {
slope = (yaxismax - yaxismin)/(curmax - curmin);
for(Int_t j=0; j<hCur1D[i]->GetNbinsX(); j++) {
Float_t content = hCur1D[i]->GetBinContent(j+1);
if(content<curmin)
hCur1D[i]->SetBinContent(j+1,yaxismin);
else
hCur1D[i]->SetBinContent(j+1,(content - curmin) * slope + yaxismin);
}
}
}
// Plasma on-axis density:
// hDen1D[0]->SetLineWidth(2);
// hDen1D[0]->SetLineColor(kGray+1);
// // // PlasmaGlob::SetH1Style(hDen1D[0],1);
// hDen1D[0]->Draw("same C");
if(opt.Contains("curr")) {
hCur1D[1]->SetLineWidth(2);
hCur1D[1]->SetLineColor(PlasmaGlob::elecLine);
hCur1D[1]->Draw("same C");
} else {
hDen1D[1]->SetLineWidth(2);
hDen1D[1]->SetLineColor(PlasmaGlob::elecLine);
// hDen1D[1]->Draw("same C");
}
if(Nspecies>=3) {
if(hDen1D[2]) {
if(opt.Contains("curr")) {
hCur1D[2]->SetLineWidth(2);
hCur1D[2]->SetLineColor(kOrange+8);
hCur1D[2]->Draw("same C");
} else {
hDen1D[2]->SetLineWidth(2);
hDen1D[2]->SetLineColor(kOrange+8);
// hDen1D[2]->Draw("same C");
}
}
}
// Current axis
TGaxis *axis = NULL;
if(opt.Contains("curr")) {
axis = new TGaxis(xMax-xRange/6.0,yMin - (factor-1)*yRange,
xMax-xRange/6.0,yaxismax,
0.001,curmax,503,"+LS");
axis->SetLineWidth(1);
axis->SetLineColor(kGray+3);//PlasmaGlob::elecLine);
axis->SetLabelColor(kGray+3);//PlasmaGlob::elecLine);
axis->SetLabelSize(0.06);
axis->SetLabelOffset(0.01);
axis->SetLabelFont(42);
axis->SetTitleColor(kGray+3);//PlasmaGlob::elecLine);
axis->SetTitleSize(0.06);
axis->SetTitleOffset(0.6);
axis->SetTitleFont(42);
axis->SetTickSize(0.03);
axis->SetTitle("I [kA]");
axis->CenterTitle();
axis->SetNdivisions(505);
axis->Draw();
}
TPaveText *textTime = new TPaveText(xMax - 0.3*xRange, yMax-0.15*yRange, xMax-0.1, yMax-0.05*yRange);
//x2-0.17,y2-0.12,x2-0.02,y2-0.02,"NDC");
PlasmaGlob::SetPaveTextStyle(textTime,32);
char ctext[128];
if(opt.Contains("units") && n0)
sprintf(ctext,"z = %5.1f #mum", Time * skindepth / PUnits::um);
else
sprintf(ctext,"t = %5.1f #omega_{p}^{-1}",Time);
textTime->SetTextFont(42);
textTime->AddText(ctext);
textTime->Draw();
// textDen->Draw();
// if(opt.Contains("units"))
// textWav->Draw();
textLabel[0] = new TPaveText(xMin + 0.02*xRange, yMax-0.2*yRange, xMin+0.30*xRange, yMax-0.05*yRange);
PlasmaGlob::SetPaveTextStyle(textLabel[0],12);
textLabel[0]->SetTextFont(42);
textLabel[0]->AddText(sLabels[0]);
textLabel[0]->Draw();
pad[0]->RedrawAxis();
C->cd(0);
sprintf(pname,"pad_%i",0);
pad[1] = (TPad*) gROOT->FindObject(pname);
pad[1]->Draw();
pad[1]->cd(); // <--------------------------------------------------------- Bottom Plot
pad[1]->SetFrameLineWidth(3);
pad[1]->SetTickx(1);
hFrame = (TH2F*) gROOT->FindObject("hFrame2");
if(hFrame) delete hFrame;
hFrame = (TH2F*) hDen2D[0]->Clone("hFrame2");
hFrame->Reset();
Float_t yFactor = pad[0]->GetAbsHNDC()/pad[1]->GetAbsHNDC();
hFrame->GetYaxis()->SetLabelSize(yFactor*0.085);
hFrame->GetYaxis()->SetTitleSize(yFactor*0.09);
hFrame->GetYaxis()->SetTitleOffset(0.7/yFactor);
hFrame->GetYaxis()->SetTickLength(0.02/yFactor);
hFrame->GetXaxis()->SetTitleSize(0.10);
hFrame->GetXaxis()->SetLabelSize(0.08);
hFrame->GetXaxis()->SetLabelOffset(0.02);
hFrame->GetXaxis()->SetTitleOffset(1.0);
hFrame->GetXaxis()->SetTickLength(0.04*yFactor);
hFrame->SetLabelFont(42,"xyz");
hFrame->SetTitleFont(42,"xyz");
hFrame->Draw("col");
// hE2D[0]->GetZaxis()->SetNdivisions(505);
hV2D->GetZaxis()->SetTitleFont(42);
hV2D->GetZaxis()->SetTickLength(0.02/yFactor);
exPot->Draw();
hV2D->Draw("col z same");
for(Int_t i=0; i<graphsV2D.GetEntriesFast(); i++) {
TGraph *gr = (TGraph*) graphsV2D.At(i);
if(!gr) continue;
gr->Draw("C");
}
for(Int_t i=0; i<graphsI2D.GetEntriesFast(); i++) {
//if(i!=2) continue;
TGraph *gr = (TGraph*) graphsI2D.At(i);
if(!gr) continue;
gr->Draw("C");
}
if(opt.Contains("1dline")) {
lineYzero->Draw();
lineYdown->Draw();
lineYup->Draw();
}
if(opt.Contains("sline")) {
if(zStartPlasma>xmin && zStartPlasma<xmax)
lineStartPlasma->Draw();
if(zStartNeutral>xmin && zStartNeutral<xmax)
lineStartNeutral->Draw();
if(zEndNeutral>xmin && zEndNeutral<xmax)
lineEndNeutral->Draw();
}
pad[1]->Update();
y1 = pad[1]->GetBottomMargin();
y2 = 1 - pad[1]->GetTopMargin();
x1 = pad[1]->GetLeftMargin();
x2 = 1 - pad[1]->GetRightMargin();
palette = (TPaletteAxis*)hV2D->GetListOfFunctions()->FindObject("palette");
if(palette) {
palette->SetY2NDC(y2 - 0.00);
palette->SetY1NDC(y1 + 0.00);
palette->SetX1NDC(x2 + 0.005);
palette->SetX2NDC(x2 + 0.03);
// palette->SetTitleFont(42);
palette->SetTitleSize(yFactor*0.075);
palette->SetTitleOffset(0.80/yFactor);
palette->SetLabelSize(yFactor*0.075);
palette->SetLabelFont(42);
palette->SetLabelOffset(0.01/yFactor);
palette->SetBorderSize(2);
palette->SetLineColor(1);
}
pad[1]->RedrawAxis();
textLabel[1] = new TPaveText(xMin + 0.02*xRange, yMax-0.2*yRange, xMin+0.30*xRange, yMax-0.05*yRange);
PlasmaGlob::SetPaveTextStyle(textLabel[1],12);
textLabel[1]->SetTextFont(42);
textLabel[1]->AddText(sLabels[1]);
textLabel[1]->Draw();
C->cd();
// Print to a file
PlasmaGlob::imgconv(C,fOutName,opt);
// ---------------------------------------------------------
PlasmaGlob::DestroyCanvases();
}
void PlotDensity1D( const TString &sim, Int_t time, Int_t Nbins=1, const TString &options="") {
#ifdef __CINT__
gSystem->Load("libplasma.so");
#endif
PlasmaGlob::Initialize();
// Init Units table
PUnits::UnitsTable::Get();
// Load PData
PData *pData = PData::Get(sim.Data());
pData->LoadFileNames(time);
if(!pData->IsInit()) return;
TString opt = options;
gStyle->SetPadRightMargin(0.20); // Margin right axis
if(opt.Contains("grid")) {
gStyle->SetPadGridX(1);
gStyle->SetPadGridY(1);
}
Bool_t CYL = kFALSE;
if(sim.Contains("cyl")) { CYL = kTRUE; opt += "cyl"; }
Bool_t ThreeD = kFALSE;
if(sim.Contains("3D")) ThreeD = kTRUE;
Bool_t INT = kTRUE; // Integrate instead of averaging.
// Some plasma constants
Float_t n0 = pData->GetPlasmaDensity();
Float_t kp = pData->GetPlasmaK();
Float_t skindepth = (1/kp);
Float_t E0 = pData->GetPlasmaE0();
// Some beam properties:
Double_t Ebeam = pData->GetBeamEnergy();
Double_t gamma = pData->GetBeamGamma();
Double_t vbeam = pData->GetBeamVelocity();
Double_t kbeta = PFunc::BeamBetatronWavenumber(gamma,n0);
Double_t rms0 = pData->GetBeamRmsY() * kp;
if(CYL) rms0 = pData->GetBeamRmsR() * kp;
cout << Form(" - Bunch gamma = %8.4f", gamma ) << endl;
cout << Form(" - Bunch velocity = %8.4f c", vbeam ) << endl;
cout << Form(" - Bunch betatron k = %8.4f mm-1", kbeta * PUnits::mm) << endl;
cout << Form(" - Bunch RMS_0 = %8.4f um", rms0 * skindepth / PUnits::um) << endl;
cout << endl;
// Time in OU
Float_t Time = pData->GetRealTime();
// z start of the plasma in normalized units.
Float_t zStartPlasma = pData->GetPlasmaStart()*kp;
// z start of the beam in normalized units.
Float_t zStartBeam = pData->GetBeamStart()*kp;
if(opt.Contains("center")) {
Time -= zStartPlasma;
if(opt.Contains("comov")) // Centers on the head of the beam.
Time += zStartBeam;
}
// Get charge density histos
Int_t Nspecies = pData->NSpecies();
TH1F **hDen1D = new TH1F*[Nspecies];
TH2F *hDen2D = NULL;
for(Int_t i=0;i<Nspecies;i++) {
hDen1D[i] = NULL;
if(!pData->GetChargeFileName(i))
continue;
if(i==0) {
if(ThreeD)
hDen2D = pData->GetCharge2DSliceZY(i,-1,Nbins);
else
hDen2D = pData->GetCharge(i,opt);
char hName[24];
sprintf(hName,"hDen_%i",i);
hDen2D->SetName(hName);
hDen2D->GetXaxis()->CenterTitle();
hDen2D->GetYaxis()->CenterTitle();
hDen2D->GetZaxis()->CenterTitle();
hDen2D->GetXaxis()->SetTitle("z [c/#omega_{p}]");
hDen2D->GetYaxis()->SetTitle("y [c/#omega_{p}]");
if(i==0)
hDen2D->GetZaxis()->SetTitle("#LTn_{e}#GT [n_{0}]");
else
hDen2D->GetZaxis()->SetTitle("#LTn_{b}#GT [n_{0}]");
}
if(Nbins==0) {
Nbins = TMath::Nint(rms0 / hDen2D->GetYaxis()->GetBinWidth(1)) ;
// cout << Form(" Rms0 = %6.2f Dx = %6.2f Nbins = %4i .",
// rms0, hDen2D[i]->GetYaxis()->GetBinWidth(1), Nbins) << endl;
}
// 1D histograms
TString opth1 = opt;
opth1 += "avg";
if(CYL) opth1 += "cyl";
if(ThreeD) {
hDen1D[i] = pData->GetH1SliceZ3D(pData->GetChargeFileName(i)->c_str(),"charge",-1,Nbins,-1,Nbins);
} else if(CYL) { // Cylindrical: The first bin with r>0 is actually the number 1 (not the 0).
hDen1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",1,Nbins,opth1.Data());
} else { // 2D cartesian
hDen1D[i] = pData->GetH1SliceZ(pData->GetChargeFileName(i)->c_str(),"charge",-1,Nbins,opth1.Data());
}
char hName[24];
sprintf(hName,"hDen_%i",i);
hDen1D[i]->SetName(hName);
hDen1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
hDen1D[i]->GetYaxis()->SetTitle("#LTn_{e}#GT [n_{0}]");
}
// Get electric fields
const Int_t Nfields = 2;
TH1F **hE1D = new TH1F*[Nfields];
for(Int_t i=0;i<Nfields;i++) {
hE1D[i] = NULL;
if(!pData->GetEfieldFileName(i))
continue;
// 1D histograms
TString opth1 = opt;
opth1 += "avg";
if(CYL) opth1 += "cyl";
char nam[3]; sprintf(nam,"e%i",i+1);
if(ThreeD) {
if(i==0)
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,-1,Nbins);
else
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,-Nbins,Nbins);
} else if(CYL) { // Cylindrical: The firt bin with r>0 is actually the number 1 (not the 0).
if(i==0)
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,1,Nbins,opth1.Data());
else
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,1,Nbins,opth1.Data());
} else { // 2D cartesian
if(i==0)
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,opth1.Data());
else
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,opth1.Data());
}
char hName[24];
sprintf(hName,"hE_%i",i);
hE1D[i]->SetName(hName);
hE1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
hE1D[i]->GetYaxis()->SetTitle("E [E_{e}]");
}
// Y range:
Int_t NbinsY = (Int_t) hDen2D->GetNbinsY();
Int_t midyBin = NbinsY/2;
if(!CYL && (Nbins > midyBin) ) Nbins = midyBin;
if(CYL && (Nbins >= NbinsY ) ) Nbins = NbinsY-1;
Int_t FirstyBin = midyBin + 1 - Nbins;
Int_t LastyBin = midyBin + Nbins;
if(CYL) {
FirstyBin = 1;
LastyBin = Nbins;
}
if(LastyBin>=NbinsY) LastyBin = NbinsY - 1;
Float_t ymin = hDen2D->GetYaxis()->GetBinLowEdge(FirstyBin);
Float_t ymax = hDen2D->GetYaxis()->GetBinLowEdge(LastyBin+1);
cout << Form(" Nbins = %i. Firstbin = %i Lastbin = %i -> ymin = %7.2f , ymax = %7.2f",Nbins,FirstyBin,LastyBin,ymin,ymax) << endl;
// ----
// Tunning the Histograms
// ---------------------
// Chaning to user units:
// cout << Form(" n0 = %10e ", n0 * PUnits::cm3) << endl;
if(opt.Contains("units") && n0) {
Int_t NbinsX = hDen2D->GetNbinsX();
Float_t xMin = skindepth * hDen2D->GetXaxis()->GetXmin() / PUnits::mm;
Float_t xMax = skindepth * hDen2D->GetXaxis()->GetXmax() / PUnits::mm;
Int_t NbinsY = hDen2D->GetNbinsY();
Float_t yMin = skindepth * hDen2D->GetYaxis()->GetXmin() / PUnits::mm;
Float_t yMax = skindepth * hDen2D->GetYaxis()->GetXmax() / PUnits::mm;
hDen2D->SetBins(NbinsX,xMin,xMax,NbinsY,yMin,yMax);
for(Int_t j=0;j<hDen2D->GetNbinsX();j++) {
for(Int_t k=0;k<hDen2D->GetNbinsY();k++) {
hDen2D->SetBinContent(j,k, hDen2D->GetBinContent(j,k) * n0 / (1e15/PUnits::cm3) );
}
}
hDen2D->GetYaxis()->SetTitle("y [mm]");
if(opt.Contains("comov"))
hDen2D->GetXaxis()->SetTitle("#zeta [mm]");
else
hDen2D->GetXaxis()->SetTitle("z [mm]");
hDen2D->GetZaxis()->SetTitle("#LTn_{b}#GT [10^{15}/cm^{3}]");
for(Int_t i=0;i<Nspecies;i++) {
Int_t NbinsX = hDen1D[i]->GetNbinsX();
Float_t xMin = skindepth * hDen1D[i]->GetXaxis()->GetXmin() / PUnits::mm;
Float_t xMax = skindepth * hDen1D[i]->GetXaxis()->GetXmax() / PUnits::mm;
hDen1D[i]->SetBins(NbinsX,xMin,xMax);
for(Int_t j=0;j<hDen1D[i]->GetNbinsX();j++) {
Float_t bincontent = (hDen1D[i]->GetBinContent(j) * n0 / (1e15/PUnits::cm3));
hDen1D[i]->SetBinContent(j,bincontent);
}
hDen1D[i]->GetYaxis()->SetTitle("#LTn_{e}#GT [10^{15}/cm^{3}]");
if(opt.Contains("comov"))
hDen1D[i]->GetXaxis()->SetTitle("#zeta [mm]");
else
hDen1D[i]->GetXaxis()->SetTitle("z [mm]");
}
for(Int_t i=0;i<Nfields;i++) {
Int_t NbinsX = hE1D[i]->GetNbinsX();
Float_t xMin = skindepth * hE1D[i]->GetXaxis()->GetXmin() / PUnits::mm;
Float_t xMax = skindepth * hE1D[i]->GetXaxis()->GetXmax() / PUnits::mm;
hE1D[i]->SetBins(NbinsX,xMin,xMax);
for(Int_t j=0;j<hE1D[i]->GetNbinsX();j++) {
hE1D[i]->SetBinContent(j, hE1D[i]->GetBinContent(j) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
hE1D[i]->GetYaxis()->SetTitle("E [GV/m]");
if(opt.Contains("comov"))
hE1D[i]->GetXaxis()->SetTitle("#zeta [mm]");
else
hE1D[i]->GetXaxis()->SetTitle("z [mm]");
}
}
// Set the range of the histogram for maximum constrast
Float_t density = 1;
if(opt.Contains("units") && n0)
density = 1e-15 * 1e-6 * n0;
Float_t Max = 1.1*hDen1D[0]->GetMaximum();
Float_t Min = 0;
// Float_t Base = density;
// Float_t Min = 2.* Base - Max;
// if(Max >= 2. * Base) {
// Max = 2. * Base;
// Min = 2. * Base - Max;
// } else if(Max<1.0 * Base) {
// Max = 1.1 * Base;
// Min = 0.;
// }
hDen1D[0]->GetYaxis()->SetRangeUser(0.,Max);
// Plotting
// -----------------------------------------------
// Canvas setup
TCanvas *C = new TCanvas("C","Charge density and Electric field on axis",850,500);
TPaveText *textTime = new TPaveText(0.63,0.87,0.78,0.92,"NDC");
PlasmaGlob::SetPaveTextStyle(textTime);
textTime->SetTextColor(kGray+2);
char ctext[128];
if(opt.Contains("units") && n0)
sprintf(ctext,"Z = %5.1f mm", 1e3 * skindepth * Time);
else
sprintf(ctext,"T = %5.1f 1/#omega_{p}",Time);
textTime->AddText(ctext);
TPaveText *textRange = new TPaveText(0.13,0.87,0.38,0.92,"NDC");
PlasmaGlob::SetPaveTextStyle(textRange,12);
textRange->SetTextColor(kGray+2);
if(opt.Contains("units") && n0)
sprintf(ctext,"%5.3f < y < %5.3f mm",ymin,ymax);
else
sprintf(ctext,"%5.3f < y < %5.3f c/#omega_{p}",ymin,ymax);
textRange->AddText(ctext);
// Actual Plotting!
// ------------------------------------------------------------
// Output file
TString fOutName = Form("./%s/Plots/Density1D/Density1D",sim.Data());
fOutName += Form("-%s_%i",sim.Data(),time);
// Colors
Int_t plasmaC = kGray+1;
Int_t beamC = kAzure-5;
Int_t fieldC = kOrange+10;
Int_t fieldCb = kGray+1;
C->cd(0);
gPad->SetFrameLineWidth(2);
hDen1D[0]->SetLineColor(plasmaC);
hDen1D[0]->SetLineWidth(1);
hDen1D[0]->Draw("C");
hDen1D[0]->GetYaxis()->CenterTitle();
hDen1D[0]->GetXaxis()->CenterTitle();
C->Update();
TLine *line0 = new TLine(hDen1D[0]->GetXaxis()->GetXmin(),
(gPad->GetUymin()+gPad->GetUymax())/2.,
hDen1D[0]->GetXaxis()->GetXmax(),
(gPad->GetUymin()+gPad->GetUymax())/2.);
line0->SetLineColor(kGray+1);
line0->SetLineStyle(2);
line0->Draw();
Float_t rightmax = 2.5 * hDen1D[1]->GetMaximum();
Float_t slope = (gPad->GetUymax() - gPad->GetUymin())/rightmax;
for(Int_t i=0;i<hDen1D[1]->GetNbinsX();i++) {
hDen1D[1]->SetBinContent(i+1,hDen1D[1]->GetBinContent(i+1)*slope + Min);
}
hDen1D[1]->SetLineWidth(2);
hDen1D[1]->SetLineColor(beamC);
hDen1D[1]->Draw("same C");
// hTest->Draw("same");
//draw an axis on the right side
TGaxis *axis = new TGaxis(gPad->GetUxmax(),gPad->GetUymin(),gPad->GetUxmax(),
gPad->GetUymax(),0,rightmax,505,"+L");
axis->SetLineWidth(1);
axis->SetLineColor(beamC);
axis->SetLabelColor(beamC);
if(opt.Contains("units") && n0)
axis->SetTitle("#LTn_{b}#GT [10^{15}/cm^{3}]");
else
axis->SetTitle("#LTn_{b}#GT [n_{0}]");
axis->CenterTitle();
axis->SetTitleColor(beamC);
axis->SetTitleOffset(1.2);
axis->Draw();
// Longitudinal Electric field
Float_t factor = 1.5;
Float_t rightmin = factor * hE1D[0]->GetMinimum();
rightmax = factor * hE1D[0]->GetMaximum();
if(hE1D[1]) {
if(hE1D[1]->GetMaximum() > hE1D[0]->GetMaximum())
rightmax = factor * hE1D[1]->GetMaximum();
}
if(rightmax > TMath::Abs(rightmin)) rightmin = -rightmax;
else rightmax = - rightmin;
slope = (gPad->GetUymax() - gPad->GetUymin())/(rightmax-rightmin);
for(Int_t i=0;i<hE1D[0]->GetNbinsX();i++) {
hE1D[0]->SetBinContent(i+1,(hE1D[0]->GetBinContent(i+1)-rightmin)*slope + Min);
}
hE1D[0]->SetLineStyle(1);
hE1D[0]->SetLineWidth(2);
hE1D[0]->SetLineColor(fieldC);
hE1D[0]->Draw("same C");
// Transverse field
for(Int_t i=0;i<hE1D[1]->GetNbinsX();i++) {
hE1D[1]->SetBinContent(i+1,(hE1D[1]->GetBinContent(i+1)-rightmin)*slope + Min);
}
hE1D[1]->SetLineStyle(2);
hE1D[1]->SetLineWidth(1);
hE1D[1]->SetLineColor(fieldC);
hE1D[1]->Draw("same C");
//draw an axis on the right side
Float_t rightmargin = 0.08;
Float_t ux = gPad->PixeltoX(gPad->UtoPixel(1-rightmargin));
TGaxis *axisE = new TGaxis(ux,gPad->GetUymin(),ux,
gPad->GetUymax(),rightmin,rightmax,505,"+L");
axisE->SetLineWidth(1);
axisE->SetLineColor(fieldC);
axisE->SetLabelColor(fieldC);
axisE->SetTitleColor(fieldC);
if(opt.Contains("units") && n0)
axisE->SetTitle("E [GV/m]");
else
axisE->SetTitle("E [E_{0}]");
axisE->CenterTitle();
axisE->SetTitleOffset(0.8);
axisE->Draw();
textTime->Draw();
textRange->Draw();
C->cd();
// Print to a file
PlasmaGlob::imgconv(C,fOutName,opt);
// ---------------------------------------------------------
}
void PlotField1D( const TString &sim, Int_t time, Int_t Nbins=1, const TString &options="") {
#ifdef __CINT__
gSystem->Load("libplasma.so");
#endif
PlasmaGlob::Initialize();
TString opt = options;
gStyle->SetPadLeftMargin(0.10); // Margin left axis
gStyle->SetPadRightMargin(0.12); // Margin right axis
if(opt.Contains("grid")) {
gStyle->SetPadGridX(1);
gStyle->SetPadGridY(1);
}
// Load PData
PData *pData = PData::Get(sim.Data());
pData->LoadFileNames(time);
if(!pData->IsInit()) return;
Bool_t CYL = kFALSE;
if(sim.Contains("cyl")) { CYL = kTRUE; opt += "cyl"; }
Bool_t ThreeD = kFALSE;
if(sim.Contains("3D")) ThreeD = kTRUE;
// Some plasma constants
Double_t n0 = pData->GetPlasmaDensity();
Double_t kp = pData->GetPlasmaK();
Double_t skindepth = 1/kp;
Double_t E0 = pData->GetPlasmaE0();
// Some beam properties:
Float_t Ebeam = pData->GetBeamEnergy() * PUnits::MeV;
Float_t gamma = Ebeam / PConst::ElectronMassE;
Float_t vbeam = TMath::Sqrt(1 - 1/(gamma*gamma));
// cout << Form(" - Bunch gamma = %8.4f", gamma ) << endl;
// cout << Form(" - Bunch velocity = %8.4f c", vbeam ) << endl;
Float_t Time = pData->GetRealTime();
// z start of the plasma in normalized units.
Float_t zStartPlasma = pData->GetPlasmaStart()*kp;
// z start of the beam in normalized units.
Float_t zStartBeam = pData->GetBeamStart()*kp;
Time -= zStartPlasma - zStartBeam;
// 1D histograms
TString opth1 = opt;
opth1 += "avg";
// Get electric fields
const Int_t Nfields = 1;
TH1F **hE1D = new TH1F*[Nfields];
for(Int_t i=0;i<Nfields;i++) {
hE1D[i] = NULL;
if(!pData->GetEfieldFileName(i))
continue;
char nam[3]; sprintf(nam,"e%i",i+1);
if(ThreeD) {
if(i==0)
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,-1,Nbins,opth1.Data());
else
hE1D[i] = pData->GetH1SliceZ3D(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,-Nbins,Nbins,opth1.Data());
} else if(CYL) { // Cylindrical: The firt bin with r>0 is actually the number 1 (not the 0).
if(i==0)
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,1,Nbins,opth1.Data());
else
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,1,Nbins,opth1.Data());
} else { // 2D cartesian
if(i==0)
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-1,Nbins,opth1.Data());
else
hE1D[i] = pData->GetH1SliceZ(pData->GetEfieldFileName(i)->c_str(),nam,-Nbins,Nbins,opth1.Data());
}
char hName[24];
sprintf(hName,"hE_%i",i);
hE1D[i]->SetName(hName);
if(opt.Contains("comov"))
hE1D[i]->GetXaxis()->SetTitle("#zeta [c/#omega_{p}]");
else
hE1D[i]->GetXaxis()->SetTitle("z [c/#omega_{p}]");
if(i==0)
hE1D[i]->GetYaxis()->SetTitle("E_{z} [E_{0}]");
else if(i==1)
hE1D[i]->GetYaxis()->SetTitle("E_{y} [E_{0}}]");
else if(i==2)
hE1D[i]->GetYaxis()->SetTitle("E_{x} [E_{0}}]");
}
// Chaning to user units:
if(opt.Contains("units") && n0) {
for(Int_t i=0;i<Nfields;i++) {
Int_t NbinsX = hE1D[i]->GetNbinsX();
Float_t xMin = (skindepth/PUnits::mm) * hE1D[i]->GetXaxis()->GetXmin();
Float_t xMax = (skindepth/PUnits::mm) * hE1D[i]->GetXaxis()->GetXmax();
hE1D[i]->SetBins(NbinsX,xMin,xMax);
for(Int_t j=0;j<NbinsX;j++) {
hE1D[i]->SetBinContent(j, hE1D[i]->GetBinContent(j) * ( E0 / (PUnits::GV/PUnits::m) ) );
}
if(opt.Contains("comov"))
hE1D[i]->GetXaxis()->SetTitle("#zeta [mm]");
else
hE1D[i]->GetXaxis()->SetTitle("z [mm]");
if(i==0)
hE1D[i]->GetYaxis()->SetTitle("E_{z} [GV/m]");
else if(i==1)
hE1D[i]->GetYaxis()->SetTitle("E_{y} [GV/m]");
else if(i==2)
hE1D[i]->GetYaxis()->SetTitle("E_{x} [GV/m]");
}
}
// Calculate wave positions:
// ----------------------------------------------------------------
// Retrieve the previous time TGraph if any;
// Open TGraph
TString filename = Form("./%s/Plots/Field1D/Field1D-%s.root",sim.Data(),sim.Data());
TFile * ifile = (TFile*) gROOT->GetListOfFiles()->FindObject(filename);
// if doesn't exist the directory should be created
if (!ifile) {
TString f = filename;
TString dir2 = f.Remove( f.Last( '/' ), f.Length() - f.Last( '/' ) );
TString dir1 = f.Remove( f.Last( '/' ), f.Length() - f.Last( '/' ) );
gSystem->mkdir( dir1 );
gSystem->mkdir( dir2 );
ifile = new TFile(filename,"UPDATE");
}
Float_t *EMaxPos = new Float_t[Nfields];
Float_t *EMaxValue = new Float_t[Nfields];
// Get the Graph with the x1 positions of the maximum E_1
TGraph **graph = new TGraph*[Nfields];
char gName[24];
for(Int_t i=0;i<Nfields;i++) {
if(!hE1D[i]) continue;
EMaxPos[i] = EMaxValue[i] = -999;
// Initial time search window:
Float_t xCenter = (hE1D[i]->GetXaxis()->GetXmin()+hE1D[i]->GetXaxis()->GetXmax())/2.;
Float_t xs1min = 0.5*(hE1D[i]->GetXaxis()->GetXmin()+xCenter);
Float_t xs1max = xCenter;
// For focusing fields i==1,2 we use a narrower window based on the previosly found
// minimum for the accelerating fields i==0.
if(i>0) {
xCenter = EMaxPos[0];
if(opt.Contains("units") && n0) {
xs1min = xCenter - (0.25*TMath::Pi() * 1e3 * skindepth);
xs1max = xCenter + (0.25*TMath::Pi() * 1e3 * skindepth);
} else {
xs1min = xCenter - 0.25*TMath::Pi();
xs1max = xCenter + 0.25*TMath::Pi();
}
}
sprintf(gName,"gEMaxPos_%i",i);
graph[i] = (TGraph*) ifile->Get(gName);
if(graph[i]) {
Double_t *y = graph[i]->GetY();
// Setup the searching windows to +/- pi/2 respect the last found minimum.
if(opt.Contains("units") && n0) {
xs1min = y[graph[i]->GetN()-1] - (0.5*TMath::Pi() * 1e3 * skindepth);
xs1max = y[graph[i]->GetN()-1] + (0.5*TMath::Pi() * 1e3 * skindepth);
} else {
xs1min = y[graph[i]->GetN()-1] - 0.5*TMath::Pi();
xs1max = y[graph[i]->GetN()-1] + 0.5*TMath::Pi();
}
delete graph[i];
}
TH1F *htemp = (TH1F*) hE1D[i]->Clone("htemp");
htemp->GetXaxis()->SetRangeUser(xs1min,xs1max);
//htemp->Smooth(1,"R");
Int_t binMax = htemp->GetMinimumBin();
EMaxPos[i] = (Float_t) htemp->GetBinCenter(binMax);
EMaxValue[i] = (Float_t) htemp->GetBinContent(binMax);
delete htemp;
}
// Tunning the Histograms
// ---------------------
// Plotting
// -----------------------------------------------
// Output file
TString fOutName = Form("./%s/Plots/Field1D/Field1D",sim.Data());
fOutName += Form("-%s_%i",sim.Data(),time);
// Canvas setup
TCanvas *C = new TCanvas("C","Electric wakefield on axis",850,1000);
C->Divide(1,2);
// Draw objects
TPaveText *textTime = new TPaveText(0.70,0.87,0.85,0.92,"NDC");
PlasmaGlob::SetPaveTextStyle(textTime);
char ctext[128];
if(opt.Contains("units") && n0)
sprintf(ctext,"Z = %5.1f mm", 1e3 * skindepth * Time);
else
sprintf(ctext,"T = %5.1f 1/#omega_{p}",Time);
textTime->AddText(ctext);
// Colors
Int_t fieldC = PlasmaGlob::fieldLine;
Int_t phaseC = kGray+1;
// Actual Plotting!
// ------------------------------------------------------------
// More makeup
C->cd(1);
gPad->SetGridy(0);
gPad->SetGridx(0);
gPad->SetFrameLineWidth(2);
hE1D[0]->SetLineWidth(1);
hE1D[0]->GetYaxis()->CenterTitle();
hE1D[0]->GetXaxis()->CenterTitle();
hE1D[0]->SetLineStyle(1);
hE1D[0]->SetLineWidth(3);
hE1D[0]->SetLineColor(fieldC);
hE1D[0]->SetMarkerStyle(20);
if(Nfields>1) {
hE1D[1]->GetYaxis()->CenterTitle();
hE1D[1]->GetXaxis()->CenterTitle();
hE1D[1]->SetLineStyle(1);
hE1D[1]->SetLineWidth(1);
hE1D[1]->SetLineColor(fieldC);
hE1D[1]->SetMarkerStyle(24);
}
Float_t factor = 1.5;
Float_t minimum = factor * hE1D[0]->GetMinimum();
Float_t maximum = factor * hE1D[0]->GetMaximum();
if(Nfields>1) {
if(hE1D[1]->GetMaximum() > hE1D[0]->GetMaximum()) {
maximum = factor * hE1D[1]->GetMaximum();
}
if(hE1D[1]->GetMinimum() < hE1D[0]->GetMinimum()) {
minimum = factor * hE1D[1]->GetMinimum();
}
}
if( maximum >= TMath::Abs(minimum)) minimum = -maximum;
else maximum = - minimum;
hE1D[0]->GetYaxis()->SetRangeUser(minimum,maximum);
hE1D[0]->Draw("C");
if(Nfields>1)
hE1D[1]->Draw("C same");
C->Update();
TLine *line0 = new TLine(hE1D[0]->GetXaxis()->GetXmin(),
(gPad->GetUymin()+gPad->GetUymax())/2.,
hE1D[0]->GetXaxis()->GetXmax(),
(gPad->GetUymin()+gPad->GetUymax())/2.);
line0->SetLineColor(kGray+1);
line0->SetLineStyle(2);
line0->Draw();
TMarker *markEMax0 = new TMarker(EMaxPos[0],EMaxValue[0], 24);
markEMax0->SetMarkerColor(fieldC);
markEMax0->SetMarkerSize(1.6);
markEMax0->Draw();
if(Nfields>1) {
TMarker *markEMax1 = new TMarker(EMaxPos[1],EMaxValue[1], 24);
markEMax1->SetMarkerColor(fieldC);
markEMax1->SetMarkerSize(1.4);
markEMax1->Draw();
}
textTime->Draw();
// ----
// Define the TGraphs
Int_t nPoints = 0;
TGraph **gEMaxPos = new TGraph*[Nfields];
TGraph **gEMaxValue = new TGraph*[Nfields];
for(Int_t i=0;i<Nfields;i++) {
if(!hE1D[i]) continue;
sprintf(gName,"gEMaxPos_%i",i);
gEMaxPos[i] = (TGraph*) ifile->Get(gName);
if(gEMaxPos[i]==NULL) {
gEMaxPos[i] = new TGraph();
gEMaxPos[i]->SetName(gName);
} else {
nPoints = gEMaxPos[i]->GetN();
}
gEMaxPos[i]->Set(nPoints+1);
if(opt.Contains("units") && n0)
gEMaxPos[i]->SetPoint(nPoints, 1e3 * skindepth * Time,EMaxPos[i]);
else
gEMaxPos[i]->SetPoint(nPoints,Time,EMaxPos[i]);
if(opt.Contains("units") && n0) {
gEMaxPos[i]->GetYaxis()->SetTitle("#zeta_{min} [mm]");
gEMaxPos[i]->GetXaxis()->SetTitle("Z [mm]");
} else {
gEMaxPos[i]->GetYaxis()->SetTitle("#zeta_{min} [c/#omega_{p}]");
gEMaxPos[i]->GetXaxis()->SetTitle("T [c/#omega_{p}]");
}
gEMaxPos[i]->Write(gEMaxPos[i]->GetName(),TObject::kOverwrite);
sprintf(gName,"gEMaxValue_%i",i);
gEMaxValue[i] = (TGraph*) ifile->Get(gName);
if(gEMaxValue[i]==NULL) {
gEMaxValue[i] = new TGraph();
gEMaxValue[i]->SetName(gName);
} else {
nPoints = gEMaxValue[i]->GetN();
}
gEMaxValue[i]->Set(nPoints+1);
if(opt.Contains("units") && n0)
gEMaxValue[i]->SetPoint(nPoints, 1e3 * skindepth * Time,EMaxValue[i]);
else
gEMaxValue[i]->SetPoint(nPoints,Time,EMaxValue[i]);
if(opt.Contains("units") && n0) {
gEMaxValue[i]->GetYaxis()->SetTitle("E_{min} [GV/m]");
gEMaxValue[i]->GetXaxis()->SetTitle("Z [mm]");
} else {
gEMaxValue[i]->GetYaxis()->SetTitle("E_{min} [E_{0}]");
gEMaxValue[i]->GetXaxis()->SetTitle("T [c/#omega_{p}]");
}
gEMaxValue[i]->Write(gEMaxValue[i]->GetName(),TObject::kOverwrite);
}
C->cd(2);
gPad->SetGridy(1);
gPad->SetGridx(0);
gPad->SetFrameLineWidth(2);
Float_t minPhase = 99.;
Float_t maxPhase = -99.;
Float_t minField = 99.;
Float_t maxField = -99.;
Double_t *yEMaxPos[Nfields];
Double_t *yEMaxValue[Nfields];
for(Int_t i=0;i<Nfields;i++) {
yEMaxPos[i] = gEMaxPos[i]->GetY();
yEMaxValue[i] = gEMaxValue[i]->GetY();
for(Int_t j=0;j<gEMaxPos[0]->GetN();j++) {
if(yEMaxPos[i][j]>maxPhase)
maxPhase = yEMaxPos[i][j];
if(yEMaxPos[i][j]<minPhase)
minPhase = yEMaxPos[i][j];
if(yEMaxValue[i][j]>maxField)
maxField = yEMaxValue[i][j];
if(yEMaxValue[i][j]<minField)
minField = yEMaxValue[i][j];
}
}
Float_t margin = (maxPhase - minPhase)/10;
gEMaxPos[0]->GetYaxis()->SetRangeUser(minPhase-margin,maxPhase+margin);
gEMaxPos[0]->GetYaxis()->CenterTitle();
gEMaxPos[0]->GetXaxis()->CenterTitle();
gEMaxPos[0]->SetLineColor(phaseC);
gEMaxPos[0]->SetMarkerColor(phaseC);
gEMaxPos[0]->SetLineWidth(3);
gEMaxPos[0]->SetMarkerStyle(20);
gEMaxPos[0]->SetMarkerSize(1.4);
gEMaxPos[0]->Draw("APC");
if(Nfields>1) {
gEMaxPos[1]->SetLineStyle(1);
gEMaxPos[1]->SetLineColor(phaseC);
gEMaxPos[1]->SetMarkerColor(phaseC);
gEMaxPos[1]->SetLineWidth(1);
gEMaxPos[1]->SetMarkerStyle(24);
gEMaxPos[1]->SetMarkerSize(1.4);
gEMaxPos[1]->Draw("PC");
}
// Emax value
// New axis first:
C->Update(); // Needed for the axis!
margin = (maxField - minField)/10;
if (margin==0) margin = 1;
Float_t rightmin = minField-margin;
Float_t rightmax = maxField+margin;
Float_t slope = (gPad->GetUymax() - gPad->GetUymin())/(rightmax-rightmin);
TGaxis *axisEmax = new TGaxis(gPad->GetUxmax(),gPad->GetUymin(),gPad->GetUxmax(),
gPad->GetUymax(),rightmin,rightmax,505,"+L");
axisEmax->SetLineWidth(1);
axisEmax->SetLineColor(fieldC);
axisEmax->SetLabelColor(fieldC);
axisEmax->SetTitleColor(fieldC);
if(opt.Contains("units") && n0)
axisEmax->SetTitle("E_{min} [GV/m]");
else
axisEmax->SetTitle("E_{min} [E_{0}]");
axisEmax->CenterTitle();
axisEmax->SetTitleSize(0.05);
axisEmax->SetTitleOffset(1.2);
axisEmax->SetLabelSize(0.05);
axisEmax->SetLabelOffset(0.006);
axisEmax->Draw();
// Adjust the TGraph
Double_t *x = gEMaxValue[0]->GetX();
Double_t *y = gEMaxValue[0]->GetY();
for(Int_t i=0;i<gEMaxValue[0]->GetN();i++) {
gEMaxValue[0]->SetPoint(i,x[i],(y[i]-rightmin)*slope + gPad->GetUymin());
}
gEMaxValue[0]->SetLineColor(fieldC);
gEMaxValue[0]->SetMarkerColor(fieldC);
gEMaxValue[0]->SetLineWidth(3);
gEMaxValue[0]->SetMarkerStyle(20);
gEMaxValue[0]->SetMarkerSize(1.4);
gEMaxValue[0]->Draw("PC");
if(Nfields>1) {
x = gEMaxValue[1]->GetX();
y = gEMaxValue[1]->GetY();
for(Int_t i=0;i<gEMaxValue[1]->GetN();i++) {
gEMaxValue[1]->SetPoint(i,x[i],(y[i]-rightmin)*slope + gPad->GetUymin());
}
gEMaxValue[1]->SetLineColor(fieldC);
gEMaxValue[1]->SetMarkerColor(fieldC);
gEMaxValue[1]->SetLineWidth(1);
gEMaxValue[1]->SetMarkerStyle(24);
gEMaxValue[1]->SetMarkerSize(1.4);
gEMaxValue[1]->Draw("PC");
}
// Emax value
// New axis first:
C->Update(); // Needed for the axis!
C->cd();
ifile->Close();
// Print to a file
PlasmaGlob::imgconv(C,fOutName,opt);
// ---------------------------------------------------------
}