int main()
{
float const conS =.3/2.35;
ofstream fout("cal/backN.cal");
ofstream fwhm("cal/fwhmback.dat");
TFile f("sort.root");
TCanvas* canvas[14];
int Ntele = 14;
int Nstrip = 32;
ostringstream outstring;
TH2I frame("frame","",10,4.5,9.5,10,0,130);
frame.SetStats(kFALSE);
double xx[14*32];
double yy[14*32];
TF1 *func = new TF1("fit",ThPeaks,3,9,4);
double para[5];
ifstream file("cal/back.cal");
float intercept, slope;
int i1,i2;
string name;
TH1F con("con","",500,0,10);
for (int itele=0;itele<Ntele;itele++)
{
outstring.str("");
outstring << "B"<<itele;
name = outstring.str();
canvas[itele] = new TCanvas(name.c_str());
canvas[itele]->Divide(6,6);
for (int istrip =0;istrip<Nstrip;istrip++)
{
canvas[itele]->cd(istrip+1);
file >> i1 >> i2 >> slope >> intercept;
outstring.str("");
outstring << "back/cal/EBC"<<itele<<"_"<<istrip;
string name = outstring.str();
cout << name << endl;
TH1I * hist = (TH1I*) f.Get(name.c_str());
frame.Draw();
hist->SetStats(kFALSE);
hist->GetXaxis()->SetRangeUser(4.5,9.5);
con.GetXaxis()->SetRangeUser(4.5,9.5);
for (int i=1;i<=500;i++)
for (int j=1;j<500;j++)
{
float deltax = hist->GetBinCenter(i)-con.GetBinCenter(j);
if (fabs(deltax) > 10.*conS)continue;
float fact = gauss(deltax,0.,conS);
float y = fact*hist->GetBinContent(i)*hist->GetBinWidth(i);
con.SetBinContent(j,y+con.GetBinContent(j));
}
for (int i=1;i<=500;i++)
{
hist->SetBinContent(i,con.GetBinContent(i));
con.SetBinContent(i,0.);
}
hist->Draw("same");
func->SetParameter(0,0);
func->SetParameter(1,1.);
func->FixParameter(2,conS);
//func->SetParameter(2,0.1);
func->SetParameter(3,8.);
func->SetLineColor(2);
//func->Draw("same");
hist->Fit(func);
func->GetParameters(para);
cout << "chisq=" << func->GetChisquare() << endl;
if (fabs(para[1]-1.) < .2)
{
slope *= para[1];
intercept = intercept*para[1] + para[0];
}
fout << itele << " " << istrip << " "
<< slope << " " << intercept << endl;
fwhm << itele << " " << istrip << " "
<< para[2]*2.35 << endl;
int ii = itele*32+istrip;
xx[ii] = (float)ii;
yy[ii] = para[2]*2.35;
cout << para[0] << " " << para[1] << " " << para[2] << endl;
}
}
TFile g("ThBack.root","RECREATE");
for (int itele=0;itele<Ntele;itele++) canvas[itele]->Write();
TCanvas fwhmCan("fwhm");
TH2I frame2("frame2","",10,0,448,10,0,0.12);
frame2.SetStats(kFALSE);
frame2.GetYaxis()->SetTitle("FWHM [MeV]");
frame2.GetXaxis()->SetTitle("back strip");
frame2.Draw();
TGraph graph(32*14,xx,yy);
graph.Draw("*");
graph.Write();
fwhmCan.Write();
g.Write();
}
void ExtractTrackBasedTiming(TString fileName = "hd_root.root", int runNumber = 10390, TString variation = "default", bool verbose = false,TString prefix = ""){
// set "prefix" in case you want to ship the txt files elsewhere...
cout << "Performing Track Matched timing fits for File: " << fileName.Data() << " Run: " << runNumber << " Variation: " << variation.Data() << endl;
ExtractTrackBasedTimingNS::thisFile = TFile::Open( fileName , "UPDATE");
if (ExtractTrackBasedTimingNS::thisFile == 0) {
cout << "Unable to open file " << fileName.Data() << "...Exiting" << endl;
return;
}
//We need the existing constants, The best we can do here is just read them from the file.
vector<double> sc_tdc_time_offsets;
vector<double> sc_fadc_time_offsets;
vector<double> tof_tdc_time_offsets;
vector<double> tof_fadc_time_offsets;
vector<double> tagm_tdc_time_offsets;
vector<double> tagm_fadc_time_offsets;
vector<double> tagh_tdc_time_offsets;
vector<double> tagh_fadc_time_offsets;
vector<double> tagh_counter_quality;
double sc_t_base_fadc, sc_t_base_tdc;
double tof_t_base_fadc, tof_t_base_tdc;
double bcal_t_base_fadc, bcal_t_base_tdc;
double tagm_t_base_fadc, tagm_t_base_tdc;
double tagh_t_base_fadc, tagh_t_base_tdc;
double fdc_t_base_fadc, fdc_t_base_tdc;
double fcal_t_base;
double cdc_t_base;
double RF_Period;
cout << "Grabbing CCDB constants..." << endl;
// Base times
GetCCDBConstants1("/CDC/base_time_offset" ,runNumber, variation, cdc_t_base);
GetCCDBConstants1("/FCAL/base_time_offset",runNumber, variation, fcal_t_base);
GetCCDBConstants1("/PHOTON_BEAM/RF/beam_period",runNumber, variation, RF_Period);
GetCCDBConstants2("/FDC/base_time_offset" ,runNumber, variation, fdc_t_base_fadc, fdc_t_base_tdc);
GetCCDBConstants2("/BCAL/base_time_offset" ,runNumber, variation, bcal_t_base_fadc, bcal_t_base_tdc);
GetCCDBConstants2("/PHOTON_BEAM/microscope/base_time_offset" ,runNumber, variation, tagm_t_base_fadc, tagm_t_base_tdc);
GetCCDBConstants2("/PHOTON_BEAM/hodoscope/base_time_offset" ,runNumber, variation, tagh_t_base_fadc, tagh_t_base_tdc);
GetCCDBConstants2("/START_COUNTER/base_time_offset" ,runNumber, variation, sc_t_base_fadc, sc_t_base_tdc);
GetCCDBConstants2("/TOF/base_time_offset" ,runNumber, variation, tof_t_base_fadc, tof_t_base_tdc);
// Per channel
//GetCCDBConstants("/BCAL/TDC_offsets" ,runNumber, variation, bcal_tdc_offsets);
//GetCCDBConstants("/FCAL/timing_offsets" ,runNumber, variation, fcal_adc_offsets);
GetCCDBConstants("/START_COUNTER/adc_timing_offsets" ,runNumber, variation, sc_fadc_time_offsets);
GetCCDBConstants("/START_COUNTER/tdc_timing_offsets" ,runNumber, variation, sc_tdc_time_offsets);
GetCCDBConstants("/PHOTON_BEAM/microscope/fadc_time_offsets" ,runNumber, variation, tagm_fadc_time_offsets,3);// Interested in 3rd column
GetCCDBConstants("/PHOTON_BEAM/microscope/tdc_time_offsets" ,runNumber, variation, tagm_tdc_time_offsets,3);
GetCCDBConstants("/PHOTON_BEAM/hodoscope/fadc_time_offsets" ,runNumber, variation, tagh_fadc_time_offsets,2);// Interested in 2nd column
GetCCDBConstants("/PHOTON_BEAM/hodoscope/tdc_time_offsets" ,runNumber, variation, tagh_tdc_time_offsets,2);
GetCCDBConstants("/PHOTON_BEAM/hodoscope/counter_quality" ,runNumber, variation, tagh_counter_quality,2);
GetCCDBConstants("/TOF/adc_timing_offsets",runNumber, variation, tof_fadc_time_offsets);
GetCCDBConstants("/TOF/timing_offsets",runNumber, variation, tof_tdc_time_offsets);
cout << "CDC base times = " << cdc_t_base << endl;
cout << "FCAL base times = " << fcal_t_base << endl;
cout << "FDC base times = " << fdc_t_base_fadc << ", " << fdc_t_base_tdc << endl;
cout << "BCAL base times = " << bcal_t_base_fadc << ", " << bcal_t_base_tdc << endl;
cout << "SC base times = " << sc_t_base_fadc << ", " << sc_t_base_tdc << endl;
cout << "TOF base times = " << tof_t_base_fadc << ", " << tof_t_base_tdc << endl;
cout << "TAGH base times = " << tagh_t_base_fadc << ", " << tagh_t_base_tdc << endl;
cout << "TAGM base times = " << tagm_t_base_fadc << ", " << tagm_t_base_tdc << endl;
cout << endl;
cout << "RF_Period = " << RF_Period << endl;
cout << endl;
cout << "Done grabbing CCDB constants...Entering fits..." << endl;
// Do our final step in the timing alignment with tracking
//When the RF is present we can try to simply pick out the correct beam bucket for each of the runs
//First just a simple check to see if we have the appropriate data
bool useRF = false;
TH1I *testHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TAGH_TDC_RF_Compare","Counter ID 001");
if (testHist != NULL){ // Not great since we rely on channel 1 working, but can be craftier later.
cout << "Using RF Times for Calibration" << endl;
useRF = true;
}
ofstream outFile;
TH2I *thisHist;
thisHist = ExtractTrackBasedTimingNS::Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGM - SC Target Time");
if (useRF) thisHist = ExtractTrackBasedTimingNS::Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGM - RFBunch Time");
if (thisHist != NULL){
//Statistics on these histograms are really quite low we will have to rebin and do some interpolation
outFile.open(prefix + "tagm_tdc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
outFile.open(prefix + "tagm_adc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
int nBinsX = thisHist->GetNbinsX();
int nBinsY = thisHist->GetNbinsY();
TH1D * selectedTAGMOffset = new TH1D("selectedTAGMOffset", "Selected TAGM Offset; Column; Offset [ns]", nBinsX, 0.5, nBinsX + 0.5);
TH1I * TAGMOffsetDistribution = new TH1I("TAGMOffsetDistribution", "TAGM Offset; TAGM Offset [ns]; Entries", 500, -250, 250);
for (int i = 1 ; i <= nBinsX; i++){
TH1D *projY = thisHist->ProjectionY("temp", i, i);
// Scan over the histogram
//chose the correct number of bins based on the histogram
float nsPerBin = (projY->GetBinCenter(projY->GetNbinsX()) - projY->GetBinCenter(1)) / projY->GetNbinsX();
float timeWindow = 3; //ns (Full Width)
int binWindow = int(timeWindow / nsPerBin);
double maxEntries = 0;
double maxMean = 0;
for (int j = 1 ; j <= projY->GetNbinsX();j++){
int minBin = j;
int maxBin = (j + binWindow) <= projY->GetNbinsX() ? (j + binWindow) : projY->GetNbinsX();
double sum = 0, nEntries = 0;
for (int bin = minBin; bin <= maxBin; bin++){
sum += projY->GetBinContent(bin) * projY->GetBinCenter(bin);
nEntries += projY->GetBinContent(bin);
if (bin == maxBin){
if (nEntries > maxEntries) {
maxMean = sum / nEntries;
maxEntries = nEntries;
}
}
}
}
//In the case there is RF, our job is to pick just the number of the correct beam bunch, so that's really all we need.
if(useRF) {
int beamBucket = int((maxMean / RF_Period) + 0.5); // +0.5 to handle rounding correctly
selectedTAGMOffset->SetBinContent(i, beamBucket);
TAGMOffsetDistribution->Fill(beamBucket);
}
else{
selectedTAGMOffset->SetBinContent(i, maxMean);
TAGMOffsetDistribution->Fill(maxMean);
}
}
double meanOffset = TAGMOffsetDistribution->GetMean();
// This might be in units of beam bunches, so we need to convert
if (useRF) meanOffset *= RF_Period;
if (verbose) {
cout << "Dumping TAGM results...\n=======================================" << endl;
cout << "TAGM mean Offset = " << meanOffset << endl;
cout << "fADC Offsets" << endl;
}
outFile.open(prefix + "tagm_adc_timing_offsets.txt", ios::out);
//for (int i = 1 ; i <= nBinsX; i++){
// Loop over rows
if (verbose) cout << "Column\tRow\tvalueToUse\toldValue\tmeanOffset\tTotal" << endl;
for (unsigned int column = 1; column <= 102; column++){
int index = GetCCDBIndexTAGM(column, 0);
double valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
//if (valueToUse == 0) valueToUse = meanOffset;
outFile << "0 " << column << " " << valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset<< endl;
if (verbose) printf("0\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", column, valueToUse, tagm_fadc_time_offsets[index-1], meanOffset,
valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset);
if (column == 9 || column == 27 || column == 81 || column == 99){
for (unsigned int row = 1; row <= 5; row++){
index = GetCCDBIndexTAGM(column, row);
valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
//if (valueToUse == 0) valueToUse = meanOffset;
outFile << row << " " << column << " " << valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset<< endl;
if (verbose) printf("%i\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", row, column, valueToUse, tagm_fadc_time_offsets[index-1], meanOffset,
valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset);
}
}
}
outFile.close();
if (verbose) {
cout << "TDC Offsets" << endl;
cout << "Column\tRow\tvalueToUse\toldValue\tmeanOffset\tTotal" << endl;
}
outFile.open(prefix + "tagm_tdc_timing_offsets.txt", ios::out);
//for (int i = 1 ; i <= nBinsX; i++){
// Loop over rows
for (unsigned int column = 1; column <= 102; column++){
int index = GetCCDBIndexTAGM(column, 0);
double valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
//if (valueToUse == 0) valueToUse = meanOffset;
outFile << "0 " << column << " " << valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset << endl;
if (verbose) printf("0\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", column, valueToUse, tagm_tdc_time_offsets[index-1], meanOffset,
valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset);
if (column == 9 || column == 27 || column == 81 || column == 99){
for (unsigned int row = 1; row <= 5; row++){
index = GetCCDBIndexTAGM(column, row);
valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
//if (valueToUse == 0) valueToUse = meanOffset;
outFile << row << " " << column << " " << valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset << endl;
if (verbose) printf("%i\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", row, column, valueToUse, tagm_tdc_time_offsets[index-1], meanOffset,
valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset);
}
}
}
outFile.close();
outFile.open(prefix + "tagm_base_time.txt", ios::out);
if (verbose) {
printf("TAGM ADC Base = %f - (%f) = %f\n", tagm_t_base_fadc, meanOffset, tagm_t_base_fadc - meanOffset);
printf("TAGM TDC Base = %f - (%f) = %f\n", tagm_t_base_tdc, meanOffset, tagm_t_base_tdc - meanOffset);
}
outFile << tagm_t_base_fadc - meanOffset << " " << tagm_t_base_tdc - meanOffset << endl;
outFile.close();
}
thisHist = ExtractTrackBasedTimingNS::Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGH - SC Target Time");
if (useRF) thisHist = ExtractTrackBasedTimingNS::Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGH - RFBunch Time");
if (thisHist != NULL) {
outFile.open(prefix + "tagh_tdc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
outFile.open(prefix + "tagh_adc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
// Setup histogram for determining the most probable change in offset for each F1TDC slot
// This is needed to account for the occasional uniform shift in offsets of the 32 counters in a slot
const int NtdcSlots = 8;
TH1I * tdcDist[NtdcSlots];
for (int i = 1; i <= NtdcSlots; i++) {
stringstream ss; ss << i;
TString s = ss.str();
double range = 500.0; double width = 0.1;
int Nbins = range/width;
double low = -0.5*range - 0.5*width;
double high = 0.5*range - 0.5*width;
tdcDist[i-1] = new TH1I("TAGHOffsetDistribution_"+s, "TAGH Offset (slot "+s+"); TAGH Offset [ns]; Entries", Nbins, low, high);
}
int nBinsX = thisHist->GetNbinsX();
TH1D * selectedTAGHOffset = new TH1D("selectedTAGHOffset", "Selected TAGH Offset; ID; Offset [ns]", nBinsX, 0.5, nBinsX + 0.5);
for (int i = 1 ; i <= nBinsX; i++) {
TH1D *projY = thisHist->ProjectionY("temp", i, i);
// Scan over histogram to find mean offset in timeWindow with largest integral
// Choose the correct number of bins based on the histogram
double nsPerBin = (projY->GetBinCenter(projY->GetNbinsX()) - projY->GetBinCenter(1)) / projY->GetNbinsX();
double timeWindow = 2.0; // ns (Full Width)
int binWindow = int(timeWindow / nsPerBin);
double maxEntries = 0;
double maxMean = 0;
for (int j = 1; j <= projY->GetNbinsX(); j++) {
int minBin = j;
int maxBin = (j + binWindow) <= projY->GetNbinsX() ? (j + binWindow) : projY->GetNbinsX();
double sum = 0;
double nEntries = 0;
for (int bin = minBin; bin <= maxBin; bin++) {
sum += projY->GetBinContent(bin) * projY->GetBinCenter(bin);
nEntries += projY->GetBinContent(bin);
if (bin == maxBin) {
if (nEntries > maxEntries) {
maxMean = sum / nEntries;
maxEntries = nEntries;
}
}
}
}
if (tagh_counter_quality[i-1] == 0.0) {
selectedTAGHOffset->SetBinContent(i, 0);
continue;
}
int tdc_slot = GetF1TDCslotTAGH(i);
if (useRF) {
int beamBucket;
if (maxMean >= 0) beamBucket = int((maxMean / RF_Period) + 0.5); // +0.5 to handle rounding correctly
else beamBucket = int((maxMean / RF_Period) - 0.5);
selectedTAGHOffset->SetBinContent(i, beamBucket);
if (maxEntries != 0.0) tdcDist[tdc_slot - 1]->Fill(beamBucket);
} else {
selectedTAGHOffset->SetBinContent(i, maxMean);
if (maxEntries != 0.0) tdcDist[tdc_slot - 1]->Fill(maxMean);
}
}
// Most probable change in offset or beam bucket per F1TDC slot
double mpDelta[NtdcSlots];
for (int i = 1; i <= NtdcSlots; i++) {
int mpBin = tdcDist[i-1]->GetMaximumBin();
mpDelta[i-1] = (mpBin > 0) ? tdcDist[i-1]->GetBinCenter(mpBin) : 0.0;
if (useRF) mpDelta[i-1] *= RF_Period;
if (verbose) {
cout << "TAGH most probable Offset = " << i << ", " << mpDelta[i-1] << endl;
}
}
if (verbose) {
cout << "Dumping TAGH results...\n=======================================" << endl;
cout << "Type\tChannel\tvalueToUse\toldValue\tmpDelta\tTotal" << endl;
}
double limit = 2.5; // ns
double ccdb_sum = 0.0;
for (int i = 1; i <= nBinsX; i++) ccdb_sum += tagh_tdc_time_offsets[i-1];
double c1_tdcOffset = 0.0;
outFile.open(prefix + "tagh_tdc_timing_offsets.txt");
for (int i = 1; i <= nBinsX; i++) {
if (tagh_counter_quality[i-1] == 0.0) {
outFile << i << " " << 0 << endl;
continue;
}
int tdc_slot = GetF1TDCslotTAGH(i);
double delta = selectedTAGHOffset->GetBinContent(i);
if (useRF) delta *= RF_Period;
if (ccdb_sum > 0.0 && fabs(delta - mpDelta[tdc_slot-1]) > limit) {
delta = mpDelta[tdc_slot-1];
}
double ccdb = tagh_tdc_time_offsets[i-1];
double offset = ccdb + delta;
if (i == 1) c1_tdcOffset = offset;
offset -= c1_tdcOffset;
outFile << i << " " << offset << endl;
if (verbose) printf("TDC\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", i, delta, ccdb, mpDelta[tdc_slot-1], offset);
}
outFile.close();
ccdb_sum = 0.0;
for (int i = 1; i <= nBinsX; i++) ccdb_sum += tagh_fadc_time_offsets[i-1];
double c1_adcOffset = 0.0;
outFile.open(prefix + "tagh_adc_timing_offsets.txt");
for (int i = 1; i <= nBinsX; i++) {
if (tagh_counter_quality[i-1] == 0.0) {
outFile << i << " " << 0 << endl;
continue;
}
int tdc_slot = GetF1TDCslotTAGH(i);
double delta = selectedTAGHOffset->GetBinContent(i);
if (useRF) delta *= RF_Period;
if (ccdb_sum > 0.0 && fabs(delta - mpDelta[tdc_slot-1]) > limit) {
delta = mpDelta[tdc_slot-1];
}
double ccdb = tagh_fadc_time_offsets[i-1];
double offset = ccdb + delta;
if (i == 1) c1_adcOffset = offset;
offset -= c1_adcOffset;
outFile << i << " " << offset << endl;
if (verbose) printf("ADC\t%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n", i, delta, ccdb, mpDelta[tdc_slot-1], offset);
}
outFile.close();
outFile.open(prefix + "tagh_base_time.txt");
outFile << tagh_t_base_fadc - c1_adcOffset << " " << tagh_t_base_tdc - c1_tdcOffset << endl;
if (verbose) {
printf("TAGH ADC Base = %f - (%f) = %f\n", tagh_t_base_fadc, c1_adcOffset, tagh_t_base_fadc - c1_adcOffset);
printf("TAGH TDC Base = %f - (%f) = %f\n", tagh_t_base_tdc, c1_tdcOffset, tagh_t_base_tdc - c1_tdcOffset);
}
outFile.close();
}
// We can use the RF time to calibrate the SC time (Experimental for now)
double meanSCOffset = 0.0; // In case we change the time of the SC, we need this in this scope
if(useRF){
TH1F * selectedSCSectorOffset = new TH1F("selectedSCSectorOffset", "Selected TDC-RF offset;Sector; Time", 30, 0.5, 30.5);
TH1F * selectedSCSectorOffsetDistribution = new TH1F("selectedSCSectorOffsetDistribution", "Selected TDC-RF offset;Time;Entries", 100, -3.0, 3.0);
TF1* f = new TF1("f","pol0(0)+gaus(1)", -3.0, 3.0);
for (int sector = 1; sector <= 30; sector++){
TH1I *scRFHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "SC_Target_RF_Compare", Form("Sector %.2i", sector));
if (scRFHist == NULL) continue;
//Do the fit
TFitResultPtr fr = scRFHist->Fit("pol0", "SQ", "", -2, 2);
double p0 = fr->Parameter(0);
f->FixParameter(0,p0);
f->SetParLimits(2, -2, 2);
f->SetParLimits(3, 0, 2);
f->SetParameter(1, 10);
f->SetParameter(2, scRFHist->GetBinCenter(scRFHist->GetMaximumBin()));
f->SetParameter(3, 0);
fr = scRFHist->Fit(f, "SQ", "", -2, 2);
double SCOffset = fr->Parameter(2);
selectedSCSectorOffset->SetBinContent(sector, SCOffset);
selectedSCSectorOffsetDistribution->Fill(SCOffset);
}
// Now write out the offsets
meanSCOffset = selectedSCSectorOffsetDistribution->GetMean();
if (verbose){
cout << "Dumping SC results...\n=======================================" << endl;
cout << "SC mean Offset = " << meanSCOffset << endl;
cout << "TDC Offsets" << endl;
cout << "Sector\toldValue\tValueToUse\tmeanOffset\tTotal" << endl;
}
outFile.open(prefix + "sc_tdc_timing_offsets.txt");
for (int sector = 1; sector <= 30; sector++){
outFile << sc_tdc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset << endl;
if (verbose) printf("%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n",sector, sc_tdc_time_offsets[sector-1], selectedSCSectorOffset->GetBinContent(sector), meanSCOffset,
sc_tdc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset);
}
outFile.close();
if (verbose){
cout << "ADC Offsets" << endl;
cout << "Sector\tvalueToUse\toldValue\tmeanOffset\tTotal" << endl;
}
outFile.open(prefix + "sc_adc_timing_offsets.txt");
for (int sector = 1; sector <= 30; sector++){
outFile << sc_fadc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset << endl;
if (verbose) printf("%i\t%.3f\t\t%.3f\t\t%.3f\t\t%.3f\n",sector,sc_fadc_time_offsets[sector-1], selectedSCSectorOffset->GetBinContent(sector), meanSCOffset,
sc_fadc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset);
}
outFile.close();
outFile.open(prefix + "sc_base_time.txt");
outFile << sc_t_base_fadc - meanSCOffset << " " << sc_t_base_tdc - meanSCOffset << endl;
if (verbose) {
printf("SC ADC Base = %f - (%f) = %f\n", sc_t_base_fadc, meanSCOffset, sc_t_base_fadc - meanSCOffset);
printf("SC TDC Base = %f - (%f) = %f\n", sc_t_base_tdc, meanSCOffset, sc_t_base_tdc - meanSCOffset);
}
outFile.close();
}
TH1I *this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TRACKING", "TOF - RF Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 1.5, maximum + 1.5);
float mean = fr->Parameter(1);
outFile.open(prefix + "tof_base_time.txt");
if (verbose) {
printf("TOF ADC Base = %f - (%f) - (%f) = %f\n", tof_t_base_fadc, mean, meanSCOffset, tof_t_base_fadc - mean - meanSCOffset);
printf("TOF TDC Base = %f - (%f) - (%f) = %f\n", tof_t_base_tdc, mean, meanSCOffset, tof_t_base_tdc - mean - meanSCOffset);
}
outFile << tof_t_base_fadc - mean - meanSCOffset<< " " << tof_t_base_tdc - mean - meanSCOffset<< endl;
outFile.close();
}
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TRACKING", "BCAL - RF Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 5, maximum + 5);
float mean = fr->Parameter(1);
outFile.open(prefix + "bcal_base_time.txt");
if (verbose) {
printf("BCAL ADC Base = %f - (%f) - (%f) = %f\n", bcal_t_base_fadc, mean, meanSCOffset, bcal_t_base_fadc - mean - meanSCOffset);
printf("BCAL TDC Base = %f - (%f) - (%f) = %f\n", bcal_t_base_tdc, mean, meanSCOffset, bcal_t_base_tdc - mean - meanSCOffset);
}
outFile << bcal_t_base_fadc - mean - meanSCOffset << " " << bcal_t_base_tdc - mean - meanSCOffset << endl; // TDC info not used
outFile.close();
}
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TRACKING", "FCAL - RF Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 5, maximum + 5);
float mean = fr->Parameter(1);
outFile.open(prefix + "fcal_base_time.txt");
if (verbose) {
printf("FCAL ADC Base = %f - (%f) - (%f) = %f\n",fcal_t_base, mean, meanSCOffset, fcal_t_base - mean - meanSCOffset);
}
outFile << fcal_t_base - mean - meanSCOffset<< endl;
outFile.close();
}
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TRACKING", "Earliest CDC Time Minus Matched SC Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 15, maximum + 10);
float mean = fr->Parameter(1);
outFile.open(prefix + "cdc_base_time.txt");
if (verbose) {
printf("CDC ADC Base = %f - (%f) - (%f) = %f\n",cdc_t_base, mean, meanSCOffset, cdc_t_base - mean - meanSCOffset);
}
outFile << cdc_t_base - mean - meanSCOffset << endl;
outFile.close();
}
// We want to account for any residual difference between the cathode and anode times.
double FDC_ADC_Offset = 0.0, FDC_TDC_Offset = 0.0;
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "FDC", "FDCHit Cathode time;1");
if(this1DHist != NULL){
Int_t firstBin = this1DHist->FindFirstBinAbove( 1 , 1); // Find first bin with content above 1 in the histogram
for (int i = 0; i <= 16; i++){
if ((firstBin + i) > 0) this1DHist->SetBinContent((firstBin + i), 0);
}
//Fit a gaussian to the left of the main peak
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TF1 *f = new TF1("f", "gaus");
f->SetParameters(100, maximum, 20);
//this1DHist->Rebin(2);
TFitResultPtr fr = this1DHist->Fit(f, "S", "", maximum - 10, maximum + 7); // Cant fix value at end of range
double mean = fr->Parameter(1);
float sigma = fr->Parameter(2);
FDC_ADC_Offset = mean;
delete f;
}
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "FDC", "FDCHit Wire time;1");
if(this1DHist != NULL){
Int_t firstBin = this1DHist->FindLastBinAbove( 1 , 1); // Find first bin with content above 1 in the histogram
for (int i = 0; i <= 25; i++){
if ((firstBin + i) > 0) this1DHist->SetBinContent((firstBin + i), 0);
}
//Fit a gaussian to the left of the main peak
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TF1 *f = new TF1("f", "gaus");
f->SetParameters(100, maximum, 20);
TFitResultPtr fr = this1DHist->Fit(f, "S", "", maximum - 10, maximum + 5); // Cant fix value at end of range
double mean = fr->Parameter(1);
float sigma = fr->Parameter(2);
FDC_TDC_Offset = mean;
delete f;
}
double FDC_ADC_TDC_Offset = FDC_ADC_Offset - FDC_TDC_Offset;
this1DHist = ExtractTrackBasedTimingNS::Get1DHistogram("HLDetectorTiming", "TRACKING", "Earliest Flight-time Corrected FDC Time");
if(this1DHist != NULL){
//Landau
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("landau", "S", "", maximum - 2.5, maximum + 4);
float MPV = fr->Parameter(1);
outFile.open(prefix + "fdc_base_time.txt");
if (verbose) {
printf("FDC ADC Base = %f - (%f) - (%f) - (%f) = %f\n",fdc_t_base_fadc, MPV, meanSCOffset, FDC_ADC_TDC_Offset, fdc_t_base_fadc - MPV - meanSCOffset - FDC_ADC_TDC_Offset);
printf("FDC TDC Base = %f - (%f) - (%f) = %f\n",fdc_t_base_tdc, MPV, meanSCOffset, fdc_t_base_tdc - MPV - meanSCOffset);
}
outFile << fdc_t_base_fadc - MPV - meanSCOffset - FDC_ADC_TDC_Offset << " " << fdc_t_base_tdc - MPV - meanSCOffset << endl;
outFile.close();
}
ExtractTrackBasedTimingNS::thisFile->Write();
return;
}
void CsIProj()
{
TFile *file = new TFile("../root/NZ_55_New.root");
TFile *gates = new TFile("../gates/zlines.root");
TFile *gates2 = new TFile("../gates/zlines_new.root");
ofstream ofile("CsI_55A_New.dat");
TCanvas *mycan = (TCanvas*)gROOT->FindObjectAny("mycan");
if(!mycan)
{
mycan = new TCanvas("mycan","mycan");
mycan->Divide(1,2);
}
ostringstream outstring;
string name;
int p1= 30, p2=50; //+- fit limits up to 2 peaks. May be different.
int const num_par = 5; //number of peaks times 2(pol1)+3(gaus).
for(int ic =0;ic<56;ic++)
{
outstring.str("");
outstring << "dEE/dEE_" << ic;
name = outstring.str();
mycan->cd(1);
TH2I *hist = (TH2I*)file->Get(name.c_str());
hist->Draw("col");
hist->GetXaxis()->SetRangeUser(200.,1800.);
hist->GetYaxis()->SetRangeUser(5.,50.);
if(ic <16 || ic > 31)
TCutG *mycut = (TCutG*)gates->Get(Form("Zline_%i_2_4",ic));
else
TCutG *mycut = (TCutG*)gates2->Get(Form("Zline_%i_2_4",ic));
mycut->Draw();
file->cd();
outstring.str("");
outstring << "CsI/CsIGate/ECsI_" << ic << "_Gate";
name = outstring.str();
gPad->SetLogz();
mycan->cd(2);
TH1I * proj = (TH1I*)file->Get(name.c_str());
proj->Draw();
proj->Rebin(4);
proj->GetXaxis()->SetRangeUser(700.,1800.);
mycan->Modified();
mycan->Update();
TMarker * mark;
mark=(TMarker*)mycan->WaitPrimitive("TMarker"); //Get the Background limits
int bkg_lo = mark->GetX();
delete mark;
mark=(TMarker*)mycan->WaitPrimitive("TMarker");
int bkg_hi = mark->GetX();
delete mark;
mark=(TMarker*)mycan->WaitPrimitive("TMarker"); // Get the 1st peak initial guess
int peak1 = mark->GetX();
delete mark;
double par[num_par] = {0.};
double out[num_par] = {0.};
int peak1_lo = peak1 - p1, peak1_hi = peak1 + p1; // Peak center and limits
TF1 *l1 = new TF1("l1", "pol1", bkg_lo, bkg_hi);
TF1 *g1 = new TF1("g1", "gaus", peak1_lo,peak1_hi);
TF1 *total = new TF1("total", "pol1(0)+gaus(2)", bkg_lo,bkg_hi);
proj->Fit(l1,"R");
proj->Fit(g1,"R+");
l1->GetParameters(&par[0]);
g1->GetParameters(&par[2]);
total->SetParameters(par);
proj->Fit(total,"R");
total->GetParameters(out);
ofile << ic << " " << out[3] << endl;
outstring.str("");
outstring << "55A_" << ic;
name = outstring.str();
total->SetName(name.c_str());
total->Draw("same");
mycan->Modified();
mycan->Update();
bool IsGood = 0;
cout << "Good fit?" << endl;
cin >> IsGood;
if(IsGood)
{
ofile << ic << " " << out[3] << endl;
}
else
ofile << ic << " " << -1 << endl;
}
return;
}
void ExtractTrackBasedTiming(int runNumber){
TString fileName = Form ("Run%i/TrackBasedTiming.root", runNumber);
TString prefix = Form ("Run%i/constants/TrackBasedTiming/",runNumber);
TString inputPrefix = Form ("Run%i/constants/TDCADCTiming/",runNumber);
thisFile = TFile::Open( fileName , "UPDATE");
if (thisFile == 0) {
cout << "Unable to open file " << fileName.Data() << "...Exiting" << endl;
return;
}
//We need the existing constants, The best we can do here is just read them from the file.
vector<double> sc_tdc_time_offsets;
vector<double> sc_fadc_time_offsets;
vector<double> tof_tdc_time_offsets;
vector<double> tof_fadc_time_offsets;
vector<double> tagm_tdc_time_offsets;
vector<double> tagm_fadc_time_offsets;
vector<double> tagh_tdc_time_offsets;
vector<double> tagh_fadc_time_offsets;
double sc_t_base_fadc;
double sc_t_base_tdc;
double tof_t_base_fadc;
double tof_t_base_tdc;
double bcal_t_base_fadc;
double bcal_t_base_tdc;
double tagm_t_base_fadc;
double tagm_t_base_tdc;
double tagh_t_base_fadc;
double tagh_t_base_tdc;
double fcal_t_base;
double cdc_t_base;
ifstream inFile;
inFile.open(inputPrefix + "sc_tdc_timing_offsets.txt");
string line;
if (inFile.is_open()){
while (getline (inFile, line)){
sc_tdc_time_offsets.push_back(atof(line.data()));
}
}
inFile.close();
ifstream inFile;
inFile.open(inputPrefix + "sc_adc_timing_offsets.txt");
string line;
if (inFile.is_open()){
while (getline (inFile, line)){
sc_fadc_time_offsets.push_back(atof(line.data()));
}
}
inFile.close();
inFile.open(inputPrefix + "tof_tdc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
tof_tdc_time_offsets.push_back(atof(line.data()));
}
}
inFile.close();
inFile.open(inputPrefix + "tof_adc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
tof_fadc_time_offsets.push_back(atof(line.data()));
}
}
inFile.close();
inFile.open(inputPrefix + "tagm_tdc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double r, c, offset;
while (iss>>r>>c>>offset){
//if (row != 0) continue;
tagm_tdc_time_offsets.push_back(offset);
}
}
}
inFile.close();
inFile.open(inputPrefix + "tagm_adc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double r, c, offset;
while (iss>>r>>c>>offset){
//if (row != 0) continue;
tagm_fadc_time_offsets.push_back(offset);
}
}
}
inFile.close();
inFile.open(inputPrefix + "tagh_tdc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double counter, offset;
while (iss>>counter>>offset){
tagh_tdc_time_offsets.push_back(offset);
}
}
}
inFile.close();
inFile.open(inputPrefix + "tagh_adc_timing_offsets.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double counter, offset;
while (iss>>counter>>offset){
tagh_fadc_time_offsets.push_back(offset);
}
}
}
inFile.close();
inFile.open(inputPrefix + "tof_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
iss>>tof_t_base_fadc>>tof_t_base_tdc;
}
}
inFile.close();
inFile.open(inputPrefix + "sc_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
iss>>sc_t_base_fadc>>sc_t_base_tdc;
}
}
inFile.close();
inFile.open(inputPrefix + "bcal_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double adc_offset, tdc_offset;
iss>>adc_offset>>tdc_offset; // TDC not used currently
bcal_t_base_fadc = adc_offset;
bcal_t_base_tdc = tdc_offset;
}
}
inFile.close();
inFile.open(inputPrefix + "tagm_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double adc_offset, tdc_offset;
iss>>adc_offset>>tdc_offset; // TDC not used currently
tagm_t_base_fadc = adc_offset;
tagm_t_base_tdc = tdc_offset;
}
}
inFile.close();
inFile.open(inputPrefix + "tagh_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
double adc_offset, tdc_offset;
iss>>adc_offset>>tdc_offset; // TDC not used currently
tagh_t_base_fadc = adc_offset;
tagh_t_base_tdc = tdc_offset;
}
}
inFile.close();
inFile.open(inputPrefix + "fcal_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
iss>>fcal_t_base;
}
}
inFile.close();
inFile.open(inputPrefix + "cdc_base_time.txt");
if (inFile.is_open()){
while (getline (inFile, line)){
istringstream iss(line);
iss>>cdc_t_base;
}
}
inFile.close();
// Do our final step in the timing alignment with tracking
//When the RF is present we can try to simply pick out the correct beam bucket for each of the runs
//First just a simple check to see if we have the appropriate data
bool useRF = false;
double RF_Period = 4.0080161;
TH1I *testHist = Get1DHistogram("HLDetectorTiming", "TAGH_TDC_RF_Compare","Counter ID 001");
if (testHist != NULL){ // Not great since we rely on channel 1 working, but can be craftier later.
useRF = true;
}
ofstream outFile;
TH2I *thisHist;
thisHist = Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGM - SC Target Time");
if (useRF) thisHist = Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGM - RFBunch Time");
if (thisHist != NULL){
//Statistics on these histograms are really quite low we will have to rebin and do some interpolation
outFile.open(prefix + "tagm_tdc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
outFile.open(prefix + "tagm_adc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
int nBinsX = thisHist->GetNbinsX();
int nBinsY = thisHist->GetNbinsY();
TH1D * selectedTAGMOffset = new TH1D("selectedTAGMOffset", "Selected TAGM Offset; Column; Offset [ns]", nBinsX, 0.5, nBinsX + 0.5);
TH1I * TAGMOffsetDistribution = new TH1I("TAGMOffsetDistribution", "TAGM Offset; TAGM Offset [ns]; Entries", 500, -250, 250);
for (int i = 1 ; i <= nBinsX; i++){
TH1D *projY = thisHist->ProjectionY("temp", i, i);
// Scan over the histogram
//chose the correct number of bins based on the histogram
float nsPerBin = (projY->GetBinCenter(projY->GetNbinsX()) - projY->GetBinCenter(1)) / projY->GetNbinsX();
float timeWindow = 3; //ns (Full Width)
int binWindow = int(timeWindow / nsPerBin);
double maxEntries = 0;
double maxMean = 0;
for (int j = 1 ; j <= projY->GetNbinsX();j++){
int minBin = j;
int maxBin = (j + binWindow) <= projY->GetNbinsX() ? (j + binWindow) : projY->GetNbinsX();
double sum = 0, nEntries = 0;
for (int bin = minBin; bin <= maxBin; bin++){
sum += projY->GetBinContent(bin) * projY->GetBinCenter(bin);
nEntries += projY->GetBinContent(bin);
if (bin == maxBin){
if (nEntries > maxEntries) {
maxMean = sum / nEntries;
maxEntries = nEntries;
}
}
}
}
//In the case there is RF, our job is to pick just the number of the correct beam bunch, so that's really all we need.
if(useRF) {
int beamBucket = int((maxMean / RF_Period) + 0.5); // +0.5 to handle rounding correctly
selectedTAGMOffset->SetBinContent(i, beamBucket);
TAGMOffsetDistribution->Fill(beamBucket);
}
else{
selectedTAGMOffset->SetBinContent(i, maxMean);
TAGMOffsetDistribution->Fill(maxMean);
}
}
/*
if (!useRF){
//TFitResultPtr fr1 = selectedTAGMOffset->Fit("pol1", "SQ", "", 0.5, nBinsX + 0.5);
TFitResultPtr fr1 = selectedTAGMOffset->Fit("pol1", "SQ", "", 5, 50);
for (int i = 1 ; i <= nBinsX; i++){
double x0 = fr1->Parameter(0);
double x1 = fr1->Parameter(1);
//double x2 = fr1->Parameter(2);
//double fitResult = x0 + i*x1 + i*i*x2;
double fitResult = x0 + i*x1;
double outlierCut = 20;
double valueToUse = selectedTAGMOffset->GetBinContent(i);
if (fabs(selectedTAGMOffset->GetBinContent(i) - fitResult) > outlierCut && valueToUse != 0.0){
valueToUse = fitResult;
}
selectedTAGMOffset->SetBinContent(i, valueToUse);
if (valueToUse != 0 ) TAGMOffsetDistribution->Fill(valueToUse);
}
}
*/
double meanOffset = TAGMOffsetDistribution->GetMean();
// This might be in units of beam bunches, so we need to convert
if (useRF) meanOffset *= RF_Period;
/*
for (int i = 1 ; i <= nBinsX; i++){
double valueToUse = selectedTAGMOffset->GetBinContent(i);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile.open(prefix + "tagm_tdc_timing_offsets.txt", ios::out | ios::app);
outFile << "0 " << i << " " << valueToUse + tagm_tdc_time_offsets[i-1] - meanOffset<< endl;
if (i == 7 || i == 25 || i == 79 || i == 97){
for(int j = 1; j <= 5; j++){
outFile << j << " " << i << " " << valueToUse + tagm_tdc_time_offsets[i-1] - meanOffset<< endl;
}
}
outFile.close();
// Apply the same shift to the adc offsets
outFile.open(prefix + "tagm_adc_timing_offsets.txt", ios::out | ios::app);
outFile << "0 " << i << " " << valueToUse + tagm_fadc_time_offsets[i-1] - meanOffset<< endl;
if (i == 7 || i == 25 || i == 79 || i == 97){
for(int j = 1; j <= 5; j++){
outFile << j << " " << i << " " << valueToUse + tagm_fadc_time_offsets[i-1] - meanOffset<< endl;
}
}
outFile.close();
}
*/
outFile.open(prefix + "tagm_adc_timing_offsets.txt", ios::out);
//for (int i = 1 ; i <= nBinsX; i++){
// Loop over rows
for (unsigned int column = 1; column <= 102; column++){
int index = GetCCDBIndexTAGM(column, 0);
double valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile << "0 " << column << " " << valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset<< endl;
if (column == 9 || column == 27 || column == 81 || column == 99){
for (unsigned int row = 1; row <= 5; row++){
index = GetCCDBIndexTAGM(column, row);
valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile << row << " " << column << " " << valueToUse + tagm_fadc_time_offsets[index-1] - meanOffset<< endl;
}
}
}
outFile.close();
outFile.open(prefix + "tagm_tdc_timing_offsets.txt", ios::out);
//for (int i = 1 ; i <= nBinsX; i++){
// Loop over rows
for (unsigned int column = 1; column <= 102; column++){
int index = GetCCDBIndexTAGM(column, 0);
double valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile << "0 " << column << " " << valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset << endl;
if (column == 9 || column == 27 || column == 81 || column == 99){
for (unsigned int row = 1; row <= 5; row++){
index = GetCCDBIndexTAGM(column, row);
valueToUse = selectedTAGMOffset->GetBinContent(index);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile << row << " " << column << " " << valueToUse + tagm_tdc_time_offsets[index-1] - meanOffset << endl;
}
}
}
outFile.close();
outFile.open(prefix + "tagm_base_time.txt", ios::out);
outFile << tagm_t_base_fadc - meanOffset << " " << tagm_t_base_tdc - meanOffset << endl;
outFile.close();
}
thisHist = Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGH - SC Target Time");
if (useRF) thisHist = Get2DHistogram("HLDetectorTiming", "TRACKING", "TAGH - RFBunch Time");
if(thisHist != NULL){
outFile.open(prefix + "tagh_tdc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
outFile.open(prefix + "tagh_adc_timing_offsets.txt", ios::out | ios::trunc);
outFile.close(); // clear file
int nBinsX = thisHist->GetNbinsX();
int nBinsY = thisHist->GetNbinsY();
TH1D * selectedTAGHOffset = new TH1D("selectedTAGHOffset", "Selected TAGH Offset; ID; Offset [ns]", nBinsX, 0.5, nBinsX + 0.5);
TH1I * TAGHOffsetDistribution = new TH1I("TAGHOffsetDistribution", "TAGH Offset; TAGH Offset [ns]; Entries", 500, -250, 250);
for (int i = 1 ; i <= nBinsX; i++){
TH1D *projY = thisHist->ProjectionY("temp", i, i);
// Scan over the histogram
//chose the correct number of bins based on the histogram
float nsPerBin = (projY->GetBinCenter(projY->GetNbinsX()) - projY->GetBinCenter(1)) / projY->GetNbinsX();
float timeWindow = 2; //ns (Full Width)
int binWindow = int(timeWindow / nsPerBin);
double maxEntries = 0;
double maxMean = 0;
for (int j = 1 ; j <= projY->GetNbinsX();j++){
int minBin = j;
int maxBin = (j + binWindow) <= projY->GetNbinsX() ? (j + binWindow) : projY->GetNbinsX();
double sum = 0;
double nEntries = 0;
for (int bin = minBin; bin <= maxBin; bin++){
sum += projY->GetBinContent(bin) * projY->GetBinCenter(bin);
nEntries += projY->GetBinContent(bin);
if (bin == maxBin){
if (nEntries > maxEntries){
maxMean = sum / nEntries;
maxEntries = nEntries;
}
}
}
}
if(useRF) {
int beamBucket = int((maxMean / RF_Period) + 0.5); // +0.5 to handle rounding correctly
selectedTAGHOffset->SetBinContent(i, beamBucket);
TAGHOffsetDistribution->Fill(beamBucket);
}
else{
selectedTAGHOffset->SetBinContent(i, maxMean);
}
/*
outFile.open("tagh_tdc_timing_offsets.txt", ios::out | ios::app);
outFile << i << " " << maxMean + tagh_tdc_time_offsets[i] << endl;
outFile.close();
outFile.open("tagh_adc_timing_offsets.txt", ios::out | ios::app);
outFile << i << " " << maxMean + tagh_fadc_time_offsets[i] << endl;
outFile.close();
*/
}
// Fit 1D histogram. If value is far from the fit use the fitted value
// Two behaviors above and below microscope
// This isn't working well, so removing...
/*
TFitResultPtr fr1 = selectedTAGHOffset->Fit("pol2", "SQ", "", 0.5, 131.5);
TFitResultPtr fr2 = selectedTAGHOffset->Fit("pol2", "SQ", "", 182.5, 274.5);
for (int i = 1 ; i <= nBinsX; i++){
double fitResult = 0.0;
if (i < 150){
double x0 = fr1->Parameter(0);
double x1 = fr1->Parameter(1);
double x2 = fr1->Parameter(2);
fitResult = x0 + i*x1 + i*i*x2;
}
else{
double x0 = fr2->Parameter(0);
double x1 = fr2->Parameter(1);
double x2 = fr2->Parameter(2);
fitResult = x0 + i*x1 + i*i*x2;
}
double outlierCut = 7;
double valueToUse = selectedTAGHOffset->GetBinContent(i);
if (fabs(selectedTAGHOffset->GetBinContent(i) - fitResult) > outlierCut && valueToUse != 0.0){
valueToUse = fitResult;
}
selectedTAGHOffset->SetBinContent(i, valueToUse);
if(valueToUse != 0) TAGHOffsetDistribution->Fill(valueToUse);
}
*/
double meanOffset = TAGHOffsetDistribution->GetMean();
if (useRF) meanOffset *= RF_Period;
for (int i = 1 ; i <= nBinsX; i++){
valueToUse = selectedTAGHOffset->GetBinContent(i);
if (useRF) valueToUse *= RF_Period;
if (valueToUse == 0) valueToUse = meanOffset;
outFile.open(prefix + "tagh_tdc_timing_offsets.txt", ios::out | ios::app);
outFile << i << " " << valueToUse + tagh_tdc_time_offsets[i-1] - meanOffset << endl;
outFile.close();
outFile.open(prefix + "tagh_adc_timing_offsets.txt", ios::out | ios::app);
outFile << i << " " << valueToUse + tagh_fadc_time_offsets[i-1] - meanOffset << endl;
outFile.close();
}
outFile.open(prefix + "tagh_base_time.txt", ios::out);
outFile << tagh_t_base_fadc - meanOffset << " " << tagh_t_base_tdc - meanOffset << endl;
outFile.close();
}
// We can use the RF time to calibrate the SC time (Experimental for now)
double meanSCOffset = 0.0; // In case we change the time of the SC, we need this in this scope
if(useRF){
TH1F * selectedSCSectorOffset = new TH1F("selectedSCSectorOffset", "Selected TDC-RF offset;Sector; Time", 30, 0.5, 30.5);
TH1F * selectedSCSectorOffsetDistribution = new TH1F("selectedSCSectorOffsetDistribution", "Selected TDC-RF offset;Time;Entries", 100, -3.0, 3.0);
TF1* f = new TF1("f","pol0(0)+gaus(1)", -3.0, 3.0);
for (int sector = 1; sector <= 30; sector++){
TH1I *scRFHist = Get1DHistogram("HLDetectorTiming", "SC_Target_RF_Compare", Form("Sector %.2i", sector));
if (scRFHist == NULL) continue;
//Do the fit
TFitResultPtr fr = scRFHist->Fit("pol0", "SQ", "", -2, 2);
double p0 = fr->Parameter(0);
f->FixParameter(0,p0);
f->SetParLimits(2, -2, 2);
f->SetParLimits(3, 0, 2);
f->SetParameter(1, 10);
f->SetParameter(2, scRFHist->GetBinCenter(scRFHist->GetMaximumBin()));
f->SetParameter(3, 0);
fr = scRFHist->Fit(f, "SQ", "", -2, 2);
double SCOffset = fr->Parameter(2);
selectedSCSectorOffset->SetBinContent(sector, SCOffset);
selectedSCSectorOffsetDistribution->Fill(SCOffset);
}
// Now write out the offsets
meanSCOffset = selectedSCSectorOffsetDistribution->GetMean();
outFile.open(prefix + "sc_tdc_timing_offsets.txt");
for (int sector = 1; sector <= 30; sector++){
outFile << sc_tdc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset << endl;
}
outFile.close();
outFile.open(prefix + "sc_adc_timing_offsets.txt");
for (int sector = 1; sector <= 30; sector++){
outFile << sc_fadc_time_offsets[sector-1] + selectedSCSectorOffset->GetBinContent(sector) - meanSCOffset << endl;
}
outFile.close();
outFile.open(prefix + "sc_base_time.txt");
outFile << sc_t_base_fadc - meanSCOffset << " " << sc_t_base_tdc - meanSCOffset << endl;
outFile.close();
}
TH1I *this1DHist = Get1DHistogram("HLDetectorTiming", "TRACKING", "TOF - SC Target Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 1.5, maximum + 1.5);
float mean = fr->Parameter(1);
outFile.open(prefix + "tof_base_time.txt");
outFile << tof_t_base_fadc - mean - meanSCOffset<< " " << tof_t_base_tdc - mean - meanSCOffset<< endl;
outFile.close();
}
this1DHist = Get1DHistogram("HLDetectorTiming", "TRACKING", "BCAL - SC Target Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 5, maximum + 5);
float mean = fr->Parameter(1);
outFile.open(prefix + "bcal_base_time.txt");
outFile << bcal_t_base_fadc - mean - meanSCOffset << " " << bcal_t_base_tdc - mean - meanSCOffset << endl; // TDC info not used
outFile.close();
}
this1DHist = Get1DHistogram("HLDetectorTiming", "TRACKING", "FCAL - SC Target Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 5, maximum + 5);
float mean = fr->Parameter(1);
outFile.open(prefix + "fcal_base_time.txt");
outFile << fcal_t_base - mean - meanSCOffset<< endl;
outFile.close();
}
this1DHist = Get1DHistogram("HLDetectorTiming", "TRACKING", "Earliest CDC Time Minus Matched SC Time");
if(this1DHist != NULL){
//Gaussian
Double_t maximum = this1DHist->GetBinCenter(this1DHist->GetMaximumBin());
TFitResultPtr fr = this1DHist->Fit("gaus", "S", "", maximum - 15, maximum + 10);
float mean = fr->Parameter(1);
outFile.open(prefix + "cdc_base_time.txt");
outFile << cdc_t_base - mean - meanSCOffset << endl;
outFile.close();
}
thisFile->Write();
return;
}