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SEExpansionMultiOrigin.cpp
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SEExpansionMultiOrigin.cpp
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/*
* File: SEExpansionMultiOrigin.cpp
* Author: peterb
*
* Created on December 12, 2012, 12:17 PM
*/
#include "SEExpansionMultiOrigin.h"
#include "Parameters.h"
SEExpansionMultiOrigin::SEExpansionMultiOrigin() {
}
SEExpansionMultiOrigin::SEExpansionMultiOrigin(const SEExpansionMultiOrigin& orig) {
}
SEExpansionMultiOrigin::~SEExpansionMultiOrigin() {
}
vector<ExpansionEvent>* SEExpansionMultiOrigin::getExpansionEvents() {
vector<ExpansionEvent>* evVect = new vector<ExpansionEvent > ();
double tArrival = 0;
for (int i = 0; i<this->width; i++) {
for (int j = 0; j<this->height; j++) {
tArrival = this->getArrivalTime(Coords(i, j));
if (tArrival > 0) {
//coord1d=this->coords2d1d(i,j);
//difference to parent: add k=-200 for founders
bool isStart = false;
for (vector<StartPos*>::iterator it = this->startPositions.begin();
it != this->startPositions.end(); ++it) {
if ((*it)->startX == i && (*it)->startY == j) {
isStart = true;
ExpansionEvent p = ExpansionEvent(Coords(i, j), tArrival, -200);
evVect->push_back(p);
break;
}
}
if (!isStart) {
ExpansionEvent p = ExpansionEvent(Coords(i, j), tArrival, this->sp->expansionK);
evVect->push_back(p);
}
}
}
}
sort(evVect->begin(), evVect->end(), &this->sorter);
// for (vector<pair<double,int> >::iterator it=evVect->begin();it!=evVect->end();++it){
// int*arr=this->coords1d2d(it->second);
// cout << "("<<arr[0]<<"/"<<arr[1]<<"):"<<it->first << endl;
// delete arr;
// }
this->expansionEvents = evVect;
return evVect;
}
void SEExpansionMultiOrigin::setupArrivalTimes() {
vector<vector<double> >tempArrivalTimes;
for (vector<StartPos*>::iterator it = this->startPositions.begin();
it != this->startPositions.end(); ++it) {
vector<double> newArrivalTime = *(new vector<double>());
this->arrivalTimes = newArrivalTime;
this->arrivalTimes.reserve(width * height);
vector<Coords> unvisited;
vector<bool> visited;
visited.reserve(width * height);
// unvisited.resize(width*height);
for (int i = 0; i<this->width; i++) {
for (int j = 0; j<this->height; j++) {
this->arrivalTimes.push_back(0);
visited.push_back(false);
unvisited.push_back(Coords(i, j));
}
}
//start with starting pos
this->sp = (*it);
unvisited[0] = Coords(sp->startX, sp->startY);
unvisited[c1d(sp->startX, sp->startY)] = Coords(0, 0);
this->arrivalTimes[c1d(sp->startX, sp->startY)] = sp->tStart;
int nVisited = width*height;
while (nVisited > 0) {
nVisited--;
if (Parameters::verbose > 999)
cout << "[dj]: nodes left" << nVisited << endl;
Coords curPos = (*unvisited.begin());
visited[c1d(curPos)] = true;
unvisited.erase(unvisited.begin());
if (Parameters::verbose > 999) {
cout << "-------------------------------" << endl;
cout << "[dj]: visiting " << curPos << "time:" << this->arrivalTimes[c1d(curPos)] << endl;
}
//if (arrivalTimes[curPos] == 0) {
// cerr << "could not reach all demes:" << curNode.c <<endl;
//}
int x = curPos.first;
int y = curPos.second;
dCheckPos(curPos, Coords(x + 1, y), 1., visited, unvisited);
dCheckPos(curPos, Coords(x - 1, y), 1., visited, unvisited);
dCheckPos(curPos, Coords(x, y + 1), 1., visited, unvisited);
dCheckPos(curPos, Coords(x, y - 1), 1., visited, unvisited);
dCheckPos(curPos, Coords(x - 1, y - 1), sqrt(2), visited, unvisited);
dCheckPos(curPos, Coords(x - 1, y + 1), sqrt(2), visited, unvisited);
dCheckPos(curPos, Coords(x + 1, y + 1), sqrt(2), visited, unvisited);
dCheckPos(curPos, Coords(x + 1, y - 1), sqrt(2), visited, unvisited);
if (Parameters::verbose > 999)
cout << "-------------------------------" << endl;
}
tempArrivalTimes.push_back(this->arrivalTimes);
}
this->arrivalTimes = vector<double>();
for (int i = 0; i < tempArrivalTimes[0].size(); ++i) { //outer loops is over all demes
double curMax = 0;
if (Parameters::verbose > 499) {
Coords c = c2d(i);
cout << c << ":";
}
for (int j = 0; j < tempArrivalTimes.size(); ++j) { //inner loop over all startPos
if (Parameters::verbose > 499) {
cout << tempArrivalTimes[j][i] << "\t";
}
if (tempArrivalTimes[j][i] > curMax) {
curMax = tempArrivalTimes[j][i];
}
}
if (Parameters::verbose > 499) {
cout << "selected: " << curMax << endl;
}
this->arrivalTimes.push_back(curMax);
}
//this->arrivalTimes[c1d(Coords(this->sp->startX, this->sp->startY))] = 1e10;
}