GitHub - mlandis/posselreg: Phylogenetic method for single-codon-site rate variation.

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Phylogenetic method for single-codon-site rate variation.

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
.DS_Store		.DS_Store
.cproject		.cproject
.project		.project
Alignment.cpp		Alignment.cpp
Alignment.h		Alignment.h
Archive.zip		Archive.zip
ConTree.cpp		ConTree.cpp
ConTree.h		ConTree.h
CondLikes.cpp		CondLikes.cpp
CondLikes.h		CondLikes.h
JphUtil.h		JphUtil.h
MbBitfield.cpp		MbBitfield.cpp
MbBitfield.h		MbBitfield.h
MbEigensystem.cpp		MbEigensystem.cpp
MbEigensystem.h		MbEigensystem.h
MbMath.cpp		MbMath.cpp
MbMath.h		MbMath.h
MbMatrix.h		MbMatrix.h
MbRandom.cpp		MbRandom.cpp
MbRandom.h		MbRandom.h
MbTransitionMatrix.cpp		MbTransitionMatrix.cpp
MbTransitionMatrix.h		MbTransitionMatrix.h
Mcmc.cpp		Mcmc.cpp
Mcmc.h		Mcmc.h
Model.cpp		Model.cpp
Model.h		Model.h
NodeKey.cpp		NodeKey.cpp
NodeKey.h		NodeKey.h
NodeSiteKey.cpp		NodeSiteKey.cpp
NodeSiteKey.h		NodeSiteKey.h
NodeSiteVals.cpp		NodeSiteVals.cpp
NodeSiteVals.h		NodeSiteVals.h
NodeVal.cpp		NodeVal.cpp
NodeVal.h		NodeVal.h
Parm.cpp		Parm.cpp
Parm.h		Parm.h
Parm_freqs.cpp		Parm_freqs.cpp
Parm_freqs.h		Parm_freqs.h
Parm_kappa.cpp		Parm_kappa.cpp
Parm_kappa.h		Parm_kappa.h
Parm_lambda.cpp		Parm_lambda.cpp
Parm_lambda.h		Parm_lambda.h
Parm_omega.cpp		Parm_omega.cpp
Parm_omega.h		Parm_omega.h
Parm_omegawts.cpp		Parm_omegawts.cpp
Parm_omegawts.h		Parm_omegawts.h
Parm_tree.cpp		Parm_tree.cpp
Parm_tree.h		Parm_tree.h
Settings.cpp		Settings.cpp
Settings.h		Settings.h
TiProbs.cpp		TiProbs.cpp
TiProbs.h		TiProbs.h
TreeSum.cpp		TreeSum.cpp
TreeSum.h		TreeSum.h
Util.cpp		Util.cpp
Util.h		Util.h
bglobin.in		bglobin.in
bglobin.tree		bglobin.tree
code.cpp		code.cpp
code.h		code.h
gap.p1.in		gap.p1.in
gap.p1.m3.tree		gap.p1.m3.tree
gap.p2.in		gap.p2.in
gap.p2.m3.tree		gap.p2.m3.tree
gap.p3.in		gap.p3.in
gap.p3.m3.tree		gap.p3.m3.tree
gap.p5.in		gap.p5.in
gap.p5.m3.tree		gap.p5.m3.tree
gap.p6.in		gap.p6.in
gap.p6.m3.tree		gap.p6.m3.tree
gap.p7.in		gap.p7.in
gap.p7.m3.tree		gap.p7.m3.tree
gap.p8.in		gap.p8.in
gap.p8.m3.tree		gap.p8.m3.tree
gap.p9.in		gap.p9.in
gap.p9.m3.tree		gap.p9.m3.tree
iomanager.cpp		iomanager.cpp
iomanager.h		iomanager.h
main.cpp		main.cpp
strepsiptera.in		strepsiptera.in

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Phylogenetic method for single-codon-site rate variation.

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