bool isExtensionManaged(const YString& file)
{
// Check whether it is a valid jpg file
String extension;
IO::ExtractExtension(extension, file, false, false);
// Only JPG files managed at the moment
return (extension.toUpper() == "JPG");
}
bool MrcpRtpHandler::received(Message& msg)
{
String trans = msg.getValue("transport");
trans.toUpper();
bool tls = false;
if (trans == "TCP/TLS/MRCPV2")
tls = true;
else if (trans != "TCP/MRCPV2")
return false;
Debug(&plugin,DebugAll,"RTP message received, TLS: %s",String::boolText(tls));
return true;
}
bool Search::setParameter(String param, int value) {
#if defined(CLOP) || defined(DEBUG_MODE)
param.toUpper();
bool res = true;
if (param == "FUTIL_MARGIN") {
FUTIL_MARGIN = value;
} else if (param == "EXT_FUTILY_MARGIN") {
EXT_FUTILY_MARGIN = value;
} else if (param == "RAZOR_MARGIN") {
RAZOR_MARGIN = value;
} else if (param == "ATTACK_KING") {
ATTACK_KING = value;
} else if (param == "BACKWARD_PAWN") {
BACKWARD_PAWN = value;
} else if (param == "BISHOP_ON_QUEEN") {
BISHOP_ON_QUEEN = value;
} else if (param == "BONUS2BISHOP") {
BONUS2BISHOP = value;
} else if (param == "CONNECTED_ROOKS") {
CONNECTED_ROOKS = value;
} else if (param == "DOUBLED_ISOLATED_PAWNS") {
DOUBLED_ISOLATED_PAWNS = value;
} else if (param == "DOUBLED_PAWNS") {
DOUBLED_PAWNS = value;
} else if (param == "END_OPENING") {
END_OPENING = value;
} else if (param == "ENEMY_NEAR_KING") {
ENEMY_NEAR_KING = value;
} else if (param == "FRIEND_NEAR_KING") {
FRIEND_NEAR_KING = value;
} else if (param == "HALF_OPEN_FILE_Q") {
HALF_OPEN_FILE_Q = value;
} else if (param == "OPEN_FILE") {
OPEN_FILE = value;
} else if (param == "OPEN_FILE_Q") {
OPEN_FILE_Q = value;
} else if (param == "PAWN_IN_7TH") {
PAWN_IN_7TH = value;
} else if (param == "PAWN_CENTER") {
PAWN_CENTER = value;
} else if (param == "PAWN_IN_8TH") {
PAWN_IN_8TH = value;
} else if (param == "PAWN_ISOLATED") {
PAWN_ISOLATED = value;
} else if (param == "PAWN_NEAR_KING") {
PAWN_NEAR_KING = value;
} else if (param == "PAWN_BLOCKED") {
PAWN_BLOCKED = value;
} else if (param == "ROOK_7TH_RANK") {
ROOK_7TH_RANK = value;
} else if (param == "ROOK_BLOCKED") {
ROOK_BLOCKED = value;
} else if (param == "ROOK_TRAPPED") {
ROOK_TRAPPED = value;
} else if (param == "UNDEVELOPED_KNIGHT") {
UNDEVELOPED_KNIGHT = value;
} else if (param == "UNDEVELOPED_BISHOP") {
UNDEVELOPED_BISHOP = value;
} else if (param == "VAL_WINDOW") {
VAL_WINDOW = value;
} else if (param == "UNPROTECTED_PAWNS") {
UNPROTECTED_PAWNS = value;
} else {
res = false;
}
return res;
#else
cout << param << " " << value << endl;
return false;
#endif
}
String PepNovoInfile::handlePTMs_(const String& modification, const bool variable)
{
String locations, key, type;
ResidueModification::TermSpecificity ts = ModificationsDB::getInstance()->getModification(modification).getTermSpecificity();
String origin = ModificationsDB::getInstance()->getModification(modification).getOrigin();
double mass = ModificationsDB::getInstance()->getModification(modification).getDiffMonoMass();
String full_name = ModificationsDB::getInstance()->getModification(modification).getFullName();
String full_id = ModificationsDB::getInstance()->getModification(modification).getFullId();
if (variable)
{
type = "OPTIONAL";
}
else
{
type = "FIXED";
}
switch (ts)
{
case ResidueModification::C_TERM: locations = "C_TERM";
break;
case ResidueModification::N_TERM: locations = "N_TERM";
break;
case ResidueModification::ANYWHERE: locations = "ALL";
break;
default: throw Exception::InvalidValue(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "Invalid term specificity", String(ts));
}
if (ts == ResidueModification::C_TERM)
{
key = "$";
}
else if (ts == ResidueModification::N_TERM)
{
key = "^";
}
//cout<<"origin: "<<origin<<" loc: "<<locations<<endl;
if ((ts == ResidueModification::C_TERM) && (origin == "X"))
{
origin = "C_TERM";
}
else if ((ts == ResidueModification::N_TERM) && (origin == "X"))
{
origin = "N_TERM";
}
else
{
key = origin;
}
if (mass >= 0)
{
key += "+" + String(Math::round(mass));
}
else
{
key += String(Math::round(mass));
}
String line = "";
line += origin.toUpper();
line += "\t";
line += mass;
line += "\t";
line += type;
line += "\t";
line += locations;
line += "\t";
line += key;
line += "\t";
line += full_name;
mods_and_keys_[key] = full_id;
return line;
}
int
main(int argc, char** argv)
{
String a;
a = "Testing...";
cout << a << endl;
cout << "length: " << a.length() << endl;
cout << "capacity: " << a.capacity() << endl;
a = a + "one two three";
cout << a << endl;
cout << "length: " << a.length() << endl;
cout << "capacity: " << a.capacity() << endl;
a = "stuff on the front:" + a;
cout << a << endl;
cout << "length: " << a.length() << endl;
cout << "capacity: " << a.capacity() << endl;
long intval = 0;
if (String("32").parseInt(intval))
cout << "Converting '32' to int: " << intval << endl;
else
cout << "Error converting string to int.\n";
double doubleval = 0.0;
String("3.141592654").parseDouble(doubleval);
cout << "Converting 3.141592654 to double: " << doubleval << endl;
long hexval = 0;
if (String("0x34ab").parseHex(hexval))
cout << "Converting 0x34ab to " << hexval << " (Should be 13483)" << endl;
else
cout << "Hex conversion failed.\n";
String tflag("true");
String fflag("false");
bool boolval;
tflag.parseBool(boolval);
if (boolval)
cout << "This should have been true (and was)" << endl;
else
cout << "tflag was false and should have been true." << endl;
fflag.parseBool(boolval);
if (boolval)
cout << "fflag should have been false and wasn't." << endl;
else
cout << "fflag was false and should have been." << endl;
char c;
a.charAt(3, c);
cout << "\nCharacter at position 3: '" << c << "' \n";
String b("cat");
String d = "cat";
if (b == d)
cout << "Yup, equal.\n";
else
cout << "Nope, not equal.\n";
if (b == "fark")
cout << b << " is less than fark\n";
cout << a.toLower() << endl;
cout << a.toUpper() << endl;
cout << "Substring..." << endl;
String substr_test = "this is a weird string. Much odd.";
cout << substr_test.substring(4, 4) << endl;
cout << "Regular Expressions\n";
String astring = "This is a test.";
if (astring.matches("is a"))
cout << " Matched!\n";
else
cout << " Didn't match.\n";
String csvstuff = "3.1415 2.71828 42 testing";
ArrayList<String> fields = csvstuff.split(" +");
}