A hack of the ViennaRNA package for supporting ligands binding and other motifs
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ElNando888/vrna-hack
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The goal of this hack/fork is to implement ligand binding routines as properly as possible (correct MFEs and partition functions) See README.orig and http://www.tbi.univie.ac.at/RNA/ for details about the original package. ----------------------------------------------------------------------------- Example: $ Progs/RNAfold --ligand FMN:200 will fold sequences assuming 200 uM of FMN in the solution.
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A hack of the ViennaRNA package for supporting ligands binding and other motifs
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