This is the main software repository of the Vista lab at Stanford University. It contains Matlab code to perform a variety of analysis on MRI data, including functional MRI and diffusion MRI.

It has the following modules:

• mrAlign : Aligning functional and anatomical data
• mrAnatomy: Handling anatomical MRI data.
• mrBOLD : analysis of functional MRI data.
• mrDiffusion : Diffusion MRI, including DTI and tractography.
• mrMesh : displaying MR data on rendered 3D surface representations of the brain.
• mrQuant : quantitative MRI (see also mrQ)
• mrScripts : a variety of useful scripts

And in addition:

• utilities
• setup
• tutorials
• external: functions written by others that we use as dependencies.

For documentation, please visit the lab wiki

(c) Vista lab, Stanford University, 2013.