xtandem-g

Private development for adding GPGPU support to xtandem.

Note, this code is not standalone and is meant to drop into an existing TPP svn checkout under extern/xtandem/src-g (or whatever alternate src directory name you choose.)

Name		Name	Last commit message	Last commit date
Latest commit History 43 Commits
test		test
.gitignore		.gitignore
Makefile		Makefile
Makefile-orig-07-07-01-2		Makefile-orig-07-07-01-2
README-MAPREDUCE		README-MAPREDUCE
README.markdown		README.markdown
base64.cpp		base64.cpp
base64.h		base64.h
expat.h		expat.h
expat_external.h		expat_external.h
expat_external_old.h		expat_external_old.h
expat_old.h		expat_old.h
loadmspectrum.cpp		loadmspectrum.cpp
loadmspectrum.h		loadmspectrum.h
mapreducehandler.cpp		mapreducehandler.cpp
mapreducehelper.cpp		mapreducehelper.cpp
mapreducehelper.h		mapreducehelper.h
mapreducehelper_bangbang.cpp		mapreducehelper_bangbang.cpp
masscalc.cpp		masscalc.cpp
masscalc.h		masscalc.h
mbiomlreport.cpp		mbiomlreport.cpp
mbiomlreport.h		mbiomlreport.h
mcleave.h		mcleave.h
mdomains.h		mdomains.h
mhistogram.h		mhistogram.h
mmotif.h		mmotif.h
mpam.cpp		mpam.cpp
mpam.h		mpam.h
mplugin.cpp		mplugin.cpp
mplugin.h		mplugin.h
mpmods.cpp		mpmods.cpp
mpmods.h		mpmods.h
mprocess.cpp		mprocess.cpp
mprocess.h		mprocess.h
mrefine.cpp		mrefine.cpp
mrefine.h		mrefine.h
mreport.cpp		mreport.cpp
mreport.h		mreport.h
mscore.cpp		mscore.cpp
mscore.h		mscore.h
mscore_c.cpp		mscore_c.cpp
mscore_c.h		mscore_c.h
mscore_hrk.cpp		mscore_hrk.cpp
mscore_hrk.h		mscore_hrk.h
mscore_k.cpp		mscore_k.cpp
mscore_k.h		mscore_k.h
mscore_kgpu.cpp		mscore_kgpu.cpp
mscore_kgpu.h		mscore_kgpu.h
mscore_kgpu_thrust.cu		mscore_kgpu_thrust.cu
mscore_kgpu_thrust.h		mscore_kgpu_thrust.h
mscore_tandem.cpp		mscore_tandem.cpp
mscore_tandem.h		mscore_tandem.h
mscorepam.h		mscorepam.h
mscorestate.h		mscorestate.h
msemistate.h		msemistate.h
msequence.h		msequence.h
msequencecollection.cpp		msequencecollection.cpp
msequencecollection.h		msequencecollection.h
msequenceserver.cpp		msequenceserver.cpp
msequenceserver.h		msequenceserver.h
msequtilities.cpp		msequtilities.cpp
msequtilities.h		msequtilities.h
mspectrum.h		mspectrum.h
mspectrumcondition.cpp		mspectrumcondition.cpp
mspectrumcondition.h		mspectrumcondition.h
mtermmods.cpp		mtermmods.cpp
mtermmods.h		mtermmods.h
mxxcleavage.cpp		mxxcleavage.cpp
mxxcleavage.h		mxxcleavage.h
p3.cpp		p3.cpp
p3mprocess.cpp		p3mprocess.cpp
p3mprocess.h		p3mprocess.h
p3msequenceserver.cpp		p3msequenceserver.cpp
p3msequenceserver.h		p3msequenceserver.h
release_notes.html		release_notes.html
saxbiomlhandler.cpp		saxbiomlhandler.cpp
saxbiomlhandler.h		saxbiomlhandler.h
saxgamlhandler.cpp		saxgamlhandler.cpp
saxgamlhandler.h		saxgamlhandler.h
saxhandler.cpp		saxhandler.cpp
saxhandler.h		saxhandler.h
saxmodhandler.cpp		saxmodhandler.cpp
saxmodhandler.h		saxmodhandler.h
saxmzdatahandler.cpp		saxmzdatahandler.cpp
saxmzdatahandler.h		saxmzdatahandler.h
saxmzxmlhandler.cpp		saxmzxmlhandler.cpp
saxmzxmlhandler.h		saxmzxmlhandler.h
saxsaphandler.cpp		saxsaphandler.cpp
saxsaphandler.h		saxsaphandler.h
saxtandeminputhandler.cpp		saxtandeminputhandler.cpp
saxtandeminputhandler.h		saxtandeminputhandler.h
saxtaxhandler.cpp		saxtaxhandler.cpp
saxtaxhandler.h		saxtaxhandler.h
serialize.cpp		serialize.cpp
serialize.h		serialize.h
stdafx.cpp		stdafx.cpp
stdafx.h		stdafx.h
tandem.cpp		tandem.cpp
timer.cpp		timer.cpp
timer.h		timer.h

bspratt/xtandem-g

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