TKDetection is a software to detect and segment wood knots.
| Library | Tested version | Library | Tested version | ||
|---|---|---|---|---|---|
| 1 | Qt | 5.12.2 | 4 | Qwt | 6.1.4 |
| 2 | Armadillo | 9.200.7 | 5 | QwtPolar | 1.1.1 |
| 3 | InsightToolkit | 4.13 | 6 | GSL | 2.5 |
To install all dependencies on Ubuntu 12.10 64 bits, you can tu use the shell script script_install_dependencies_ubuntu12.10_x86_64.sh available on the TKDetection directory. We recomand to copy the script on a dedicated directory before to execute the following commands :
chmod u+x script_install_dependencies_ubuntu12.10_x86_64.sh
./script_install_dependencies_ubuntu12.10_x86_64.sh
When installation finished, you can remove the dedicated directory.
On another plateform, you must apply the following steps.
Install "build-essential", "cmake" and "git" packages.
sudo apt install build-essential cmake git
It is recommended to install the libraries LAPACK, BLAS, ATLAS, and Boost to improve the performances, in particular for the matrix sum and product of Armadillo.
sudo apt install liblapack-dev libblas-dev libatlas-dev libatlas-base-dev libboost-dev libboost-all-dev
Install the qtcreator package available on the Universe repository. This meta-package install the set of Qt dependencies.
sudo apt install qtcreator
Download the last version available on the website http://arma.sourceforge.net. Install then Armadillo by replacing x.y.z by the downloaded version number:
tar xvf armadillo-x.y.z.tar.gz
cd armadillo-x.y.z/
./configure
make
sudo make install
If problems appear concerning boost, you can compile boost from the version available on the website http://www.boost.org/users/history/version_1_53_0.html:
tar xvf boost_1_53_0.tar.gz
cd boost_1_53_0/
./bootstrap.sh -prefix=/usr/
sudo ./b2 --build-type=complete --layout=tagged install
Download the version available on the website http://www.itk.org/ITK/resources/software.html.
Replace x.y.z by the downloaded version number:
tar xvf InsightToolkit-x.y.z.tar.gz
mkdir InsightToolkit-x.y.z/build
cd InsightToolkit-x.y.z/build
cmake .. -DCMAKE_CXX_FLAGS="-std=c++14" -DCMAKE_BUILD_TYPE="Release" -DBUILD_EXAMPLES=false -DBUILD_TESTING=false
make
sudo make install
If a problem appear with tif_config.h and/or tif_dir.h (typically with ITK 4.3), copy the missing files to the libraries repository:
sudo cp ./Modules/ThirdParty/TIFF/src/itktiff/tif_config.h /usr/local/include/ITK-x.y/itktiff/
sudo cp ../Modules/ThirdParty/TIFF/src/itktiff/tif_dir.h /usr/local/include/ITK-x.y/itktiff/
Think to change the ITK_NUMBER variable by x.y in the TKDetection.pro file (line 13) !
Use the version available on the Main repository.
sudo apt install libqwt-qt5-dev
If problems appear, you can install the version available on the website http://sourceforge.net/projects/qwt/files/qwt/x.y.z/ :
tar xvf qwt-x.y.z.tar.bz2
mkdir qwt-x.y.z/build
cd qwt-x.y.z/build
qmake ../qwt.pro
make
sudo make install
- Check that the following files exist:
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwt.prf
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwtconfig.pri
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwtfunctions.pri
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwtmathml.prf
If they do not exist:
sudo ln -s /usr/local/qwt-x.y.z/features/qwt.prf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
sudo ln -s /usr/local/qwtpolar-x.y.z/features/qwtconfig.pri /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
sudo ln -s /usr/local/qwtpolar-x.y.z/features/qwtfunctions.pri /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
sudo ln -s /usr/local/qwtpolar-x.y.z/features/qwtmathml.pri /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
- if 1. does not resolve the problem:
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwt.so /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwt.so.x /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwt.so.x.y /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwt.so.x.y.z /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwtmathml.so /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwtmathml.so.x /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwtmathml.so.x.y /usr/lib/
sudo ln -s /usr/local/qwt-x.y.z/lib/libqwtmathml.so.x.y.z /usr/lib/
Use the version available on the website http://sourceforge.net/projects/qwtpolar.
Replace x.y.z by the downloaded version number:
tar xvf qwtpolar-x.y.z.tar.bz2
mkdir qwtpolar-x.y.z/build
cd qwtpolar-x.y.z/build
qmake ..
make
sudo make install
- Check that the following files exist:
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwtpolar.prf
- /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qwtpolarconfig.pri
If they do not exist:
sudo ln -s /usr/local/qwtpolar-x.y.z/features/qwtpolar.prf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
sudo ln -s /usr/local/qwtpolar-x.y.z/features/qwtpolarconfig.pri /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/
- if 1. does not resolve the problem:
sudo ln -s /usr/local/qwtpolar-x.y.z/lib/libqwtpolar.so /usr/lib/
sudo ln -s /usr/local/qwtpolar-x.y.z/lib/libqwtpolar.so.x /usr/lib/
sudo ln -s /usr/local/qwtpolar-x.y.z/lib/libqwtpolar.so.x.y /usr/lib/
sudo ln -s /usr/local/qwtpolar-x.y.z/lib/libqwtpolar.so.x.y.z /usr/lib/
Don't forget to replace x.y.z by the downloaded version number:
sudo cp /usr/local/qwtpolar-x.y.z/plugins/designer/libqwt_polar_designer_plugin.so /usr/lib/x86_64-linux-gnu/qt5/plugins/designer/
The Gnu Standard Library (GSL) is present in the Ubuntu Main repository:
sudo apt install libgsl-dev
Clone the project from the Github repository of this webpage.
git clone https://github.com/akrah/TKDetection.git
Check the ITK_NUMBER variable in the TKDetection.pro file (line 13) and compile:
cd TKDetection
mkdir build && cd build
qmake ..
make
The binary file TKDetection is then located in the build/bin directory of TKDetection.
TKDetection is originally wrote in french language. If you want to translate interface in english, just copy the TKDetection_en.qm file in the same folder than the binary file TKDetection.
