GitHub - kukuruza/tasep: Parallel algorithm for TASEP model (implemented on CUDA)

kukuruza / tasep Public

Parallel algorithm for TASEP model (implemented on CUDA)

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Name		Name	Last commit message	Last commit date
Latest commit History 67 Commits
tclap		tclap
test		test
.gitignore		.gitignore
Makefile		Makefile
bam_parser.cpp		bam_parser.cpp
bam_parser.hpp		bam_parser.hpp
cu_tasep_playground.cpp		cu_tasep_playground.cpp
footprint_generator.cpp		footprint_generator.cpp
lattice.hpp		lattice.hpp
lattice_approx.cpp		lattice_approx.cpp
lattice_ribo.cu		lattice_ribo.cu
lattice_single.cpp		lattice_single.cpp
math_utils.hpp		math_utils.hpp
reference_info_builder.cpp		reference_info_builder.cpp
reference_info_builder.hpp		reference_info_builder.hpp
ribomap_profiler.cpp		ribomap_profiler.cpp
ribomap_profiler.hpp		ribomap_profiler.hpp
runTest.sh		runTest.sh
tasep_playground.cpp		tasep_playground.cpp
transcript_model.cpp		transcript_model.cpp
transcript_model.hpp		transcript_model.hpp
utils.cpp		utils.cpp
utils.hpp		utils.hpp