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OSIM
====
OSIM1.0 
- basic functions to simulate populations and get genotypes at the last generation
- mutations are saved as new founders.

OSIM1.1
- an SimPop class to pack information like: number of chromesome, number of breed, generations and simulation process. This makes the main.cpp file clear.

OSIM2.0
- new method to sample and save mutations(Dorian).

7/10/2014
OSIM1.2
- add pedsample, simulation with pedigree
- add ped.h to solve the problem with including files with each other.

7/20/2014
OSIM1.3
- add functions in SimPop class to make crossing between two populations possible.
- make the structure more clear.

12/1/2014
GenSim1.3
- add functions to use files to read in genome info for several chromosomes.
GenSim1.13
- optimize code to follow DRY priciples
- add genoinfo file and haplotypes files.

1/26/2015
GenSim1.4
- add phenotype simulation functions

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