int main(int argc, char *argv[])
{
cout.setf(ios::fixed, ios::floatfield);
cout.precision(12);
TH1::AddDirectory(kFALSE);
cout << "Run " << argv[1] << " ..." << endl;
char tempOut[500];
sprintf(tempOut, "%s/replay_pass1_%s.root",getenv("REPLAY_PASS1"), argv[1]);
//Check if the file is good already and quit if it is so that we can
// only replay the files that are bad...
if ( OnlyReplayBadFiles ) {
if ( checkIfReplayFileIsGood(std::string(tempOut)) == 1 ) return 1;
else {
std::ofstream badRuns("badRuns.txt", std::fstream::app);
badRuns << argv[1] << "\n";
badRuns.close();
}
}
// Read cuts file
char tempFileCuts[500];
sprintf(tempFileCuts, "%s/cuts_%s.dat", getenv("CUTS"),argv[1]);
cout << "... Reading: " << tempFileCuts << endl;
ifstream fileCuts(tempFileCuts);
fileCuts >> cutBeamBurstTime >> comment;
fileCuts >> nCutsTimeWindows >> comment;
if (nCutsTimeWindows > 0) {
for (int i=0; i<nCutsTimeWindows; i++) {
fileCuts >> cutTimeWindowLower[i] >> cutTimeWindowUpper[i];
}
}
fileCuts >> cutEastAnode >> comment;
fileCuts >> cutWestAnode >> comment;
fileCuts >> cutEastTwoFold >> comment;
fileCuts >> cutWestTwoFold >> comment;
fileCuts >> cutEastTopVetoQADC >> comment;
fileCuts >> cutEastTopVetoTDC >> comment;
fileCuts >> cutEastDriftTubeTAC >> comment;
fileCuts >> cutWestDriftTubeTAC >> comment;
fileCuts >> cutEastBackingVetoQADC >> comment;
fileCuts >> cutEastBackingVetoTDC >> comment;
fileCuts >> cutWestBackingVetoQADC >> comment;
fileCuts >> cutWestBackingVetoTDC >> comment;
cout << "... Beam Burst T0 Cut: " << cutBeamBurstTime << endl;
cout << "... Number of Time Windows Cuts: " << nCutsTimeWindows << endl;
if (nCutsTimeWindows > 0) {
for (int i=0; i<nCutsTimeWindows; i++) {
cout << " [" << cutTimeWindowLower[i] << ", " << cutTimeWindowUpper[i] << "]" << endl;
}
}
cout << "... East MWPC Anode Cut: " << cutEastAnode << endl;
cout << "... West MWPC Anode Cut: " << cutWestAnode << endl;
cout << "... East Scintillator Two-Fold Trigger Cut: " << cutEastTwoFold << endl;
cout << "... West Scintillator Two-Fold Trigger Cut: " << cutWestTwoFold << endl;
cout << "... East Top Veto QADC Cut: " << cutEastTopVetoQADC << endl;
cout << "... East Top Veto TDC Cut: " << cutEastTopVetoTDC << endl;
cout << "... East Drift Tube TAC Cut: " << cutEastDriftTubeTAC << endl;
cout << "... West Drift Tube TAC Cut: " << cutWestDriftTubeTAC << endl;
cout << "... East Backing Veto QADC Cut: " << cutEastBackingVetoQADC << endl;
cout << "... East Backing Veto TDC Cut: " << cutEastBackingVetoTDC << endl;
cout << "... West Backing Veto QADC Cut: " << cutWestBackingVetoQADC << endl;
cout << "... West Backing Veto TDC Cut: " << cutWestBackingVetoTDC << endl;
//First load separate PMT pedestals as produced by the trigger thresholds
std::vector < std::vector <Double_t> > pmtPedestals = loadPMTpedestals(atoi(argv[1]));
// Read pedestals file
char tempFilePed[500];
int iRun;
sprintf(tempFilePed, "%s/pedestals_%s.dat", getenv("PEDESTALS"), argv[1]);
cout << "... Reading: " << tempFilePed << endl;
ifstream filePed(tempFilePed);
for (int i=0; i<8; i++) {
filePed >> iRun >> pedQadc[i];
pedQadc[i] = pmtPedestals[i][0]; //replace pedQadc[i] with the pedestals separately loaded
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPdc2[i];
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPadc[i];
}
filePed >> iRun >> pedPdc30;
filePed >> iRun >> pedPdc34;
//cout << iRun << " " << pedPdc30 << endl;
//cout << iRun << " " << pedPdc34 << endl;
// Open output ntuple
DataTree *t = new DataTree();
t->makeOutputTree(std::string(tempOut),"pass1");
// Open input ntuple
char tempIn[500];
sprintf(tempIn, "%s/full%s.root",getenv("UCNA_RAW_DATA"), argv[1]);
TFile *fileIn = new TFile(tempIn, "READ");
TTree *Tin = (TTree*)(fileIn->Get("h1"));
// Variables
Tin->SetBranchAddress("Pdc30", &Pdc30);
Tin->SetBranchAddress("Pdc34", &Pdc34);
Tin->SetBranchAddress("Tdc016", &Tdc016);
Tin->SetBranchAddress("Tdc017", &Tdc017);
Tin->SetBranchAddress("Tdc00", &Tdc00);
Tin->SetBranchAddress("Tdc01", &Tdc01);
Tin->SetBranchAddress("Tdc02", &Tdc02);
Tin->SetBranchAddress("Tdc03", &Tdc03);
Tin->SetBranchAddress("Tdc08", &Tdc08);
Tin->SetBranchAddress("Tdc09", &Tdc09);
Tin->SetBranchAddress("Tdc014", &Tdc010); //Note that what used to be TDC10 is now TDC14
Tin->SetBranchAddress("Tdc011", &Tdc011);
Tin->SetBranchAddress("Sis00", &Sis00);
Tin->SetBranchAddress("Qadc0", &Qadc[0]);
Tin->SetBranchAddress("Qadc1", &Qadc[1]);
Tin->SetBranchAddress("Qadc2", &Qadc[2]);
Tin->SetBranchAddress("Qadc3", &Qadc[3]);
Tin->SetBranchAddress("Qadc4", &Qadc[4]);
Tin->SetBranchAddress("Qadc5", &Qadc[5]);
Tin->SetBranchAddress("Qadc6", &Qadc[6]);
Tin->SetBranchAddress("Qadc7", &Qadc[7]);
Tin->SetBranchAddress("Pdc20", &Pdc2[0]);
Tin->SetBranchAddress("Pdc21", &Pdc2[1]);
Tin->SetBranchAddress("Pdc22", &Pdc2[2]);
Tin->SetBranchAddress("Pdc23", &Pdc2[3]);
Tin->SetBranchAddress("Pdc24", &Pdc2[4]);
Tin->SetBranchAddress("Pdc25", &Pdc2[5]);
Tin->SetBranchAddress("Pdc26", &Pdc2[6]);
Tin->SetBranchAddress("Pdc27", &Pdc2[7]);
Tin->SetBranchAddress("Pdc28", &Pdc2[8]);
Tin->SetBranchAddress("Pdc29", &Pdc2[9]);
Tin->SetBranchAddress("Pdc210", &Pdc2[10]);
Tin->SetBranchAddress("Pdc211", &Pdc2[11]);
Tin->SetBranchAddress("Pdc212", &Pdc2[12]);
Tin->SetBranchAddress("Pdc213", &Pdc2[13]);
Tin->SetBranchAddress("Pdc214", &Pdc2[14]);
Tin->SetBranchAddress("Pdc215", &Pdc2[15]);
Tin->SetBranchAddress("Pdc216", &Pdc2[16]);
Tin->SetBranchAddress("Pdc217", &Pdc2[17]);
Tin->SetBranchAddress("Pdc218", &Pdc2[18]);
Tin->SetBranchAddress("Pdc219", &Pdc2[19]);
Tin->SetBranchAddress("Pdc220", &Pdc2[20]);
Tin->SetBranchAddress("Pdc221", &Pdc2[21]);
Tin->SetBranchAddress("Pdc222", &Pdc2[22]);
Tin->SetBranchAddress("Pdc223", &Pdc2[23]);
Tin->SetBranchAddress("Pdc224", &Pdc2[24]);
Tin->SetBranchAddress("Pdc225", &Pdc2[25]);
Tin->SetBranchAddress("Pdc226", &Pdc2[26]);
Tin->SetBranchAddress("Pdc227", &Pdc2[27]);
Tin->SetBranchAddress("Pdc228", &Pdc2[28]);
Tin->SetBranchAddress("Pdc229", &Pdc2[29]);
Tin->SetBranchAddress("Pdc230", &Pdc2[30]);
Tin->SetBranchAddress("Pdc231", &Pdc2[31]);
Tin->SetBranchAddress("Padc0", &Padc[0]);
Tin->SetBranchAddress("Padc1", &Padc[1]);
Tin->SetBranchAddress("Padc2", &Padc[2]);
Tin->SetBranchAddress("Padc3", &Padc[3]);
Tin->SetBranchAddress("Padc4", &Padc[4]);
Tin->SetBranchAddress("Padc5", &Padc[5]);
Tin->SetBranchAddress("Padc6", &Padc[6]);
Tin->SetBranchAddress("Padc7", &Padc[7]);
Tin->SetBranchAddress("Padc8", &Padc[8]);
Tin->SetBranchAddress("Padc9", &Padc[9]);
Tin->SetBranchAddress("Padc10", &Padc[10]);
Tin->SetBranchAddress("Padc11", &Padc[11]);
Tin->SetBranchAddress("Padc12", &Padc[12]);
Tin->SetBranchAddress("Padc13", &Padc[13]);
Tin->SetBranchAddress("Padc14", &Padc[14]);
Tin->SetBranchAddress("Padc15", &Padc[15]);
Tin->SetBranchAddress("Padc16", &Padc[16]);
Tin->SetBranchAddress("Padc17", &Padc[17]);
Tin->SetBranchAddress("Padc18", &Padc[18]);
Tin->SetBranchAddress("Padc19", &Padc[19]);
Tin->SetBranchAddress("Padc20", &Padc[20]);
Tin->SetBranchAddress("Padc21", &Padc[21]);
Tin->SetBranchAddress("Padc22", &Padc[22]);
Tin->SetBranchAddress("Padc23", &Padc[23]);
Tin->SetBranchAddress("Padc24", &Padc[24]);
Tin->SetBranchAddress("Padc25", &Padc[25]);
Tin->SetBranchAddress("Padc26", &Padc[26]);
Tin->SetBranchAddress("Padc27", &Padc[27]);
Tin->SetBranchAddress("Padc28", &Padc[28]);
Tin->SetBranchAddress("Padc29", &Padc[29]);
Tin->SetBranchAddress("Padc30", &Padc[30]);
Tin->SetBranchAddress("Padc31", &Padc[31]);
Tin->SetBranchAddress("S83028", &S83028);
Tin->SetBranchAddress("S8200", &S8200);
Tin->SetBranchAddress("Clk0", &Clk0);
Tin->SetBranchAddress("Clk1", &Clk1);
Tin->SetBranchAddress("Clk2", &Clk2);
Tin->SetBranchAddress("Clk3", &Clk3);
Tin->SetBranchAddress("Pdc38", &Pdc38);
Tin->SetBranchAddress("Pdc39", &Pdc39);
Tin->SetBranchAddress("Pdc310", &Pdc310);
Tin->SetBranchAddress("Pdc311", &Pdc311);
Tin->SetBranchAddress("Qadc9", &Qadc9);
Tin->SetBranchAddress("Tdc019", &Tdc019);
Tin->SetBranchAddress("Pdc313", &Pdc313);
Tin->SetBranchAddress("Pdc315", &Pdc315);
Tin->SetBranchAddress("Qadc8", &Qadc8);
Tin->SetBranchAddress("Tdc018", &Tdc018);
Tin->SetBranchAddress("Qadc10", &Qadc10);
Tin->SetBranchAddress("Tdc020", &Tdc020);
Tin->SetBranchAddress("Number", &Number);
Tin->SetBranchAddress("Delt0", &Delt0);
Tin->SetBranchAddress("Evnb0", &Evnb[0]);
Tin->SetBranchAddress("Evnb1", &Evnb[1]);
Tin->SetBranchAddress("Evnb2", &Evnb[2]);
Tin->SetBranchAddress("Evnb3", &Evnb[3]);
Tin->SetBranchAddress("Evnb4", &Evnb[4]);
Tin->SetBranchAddress("Bkhf0", &Bkhf[0]);
Tin->SetBranchAddress("Bkhf1", &Bkhf[1]);
Tin->SetBranchAddress("Bkhf2", &Bkhf[2]);
Tin->SetBranchAddress("Bkhf3", &Bkhf[3]);
Tin->SetBranchAddress("Bkhf4", &Bkhf[4]);
int nEvents = Tin->GetEntries();
cout << "... Processing nEvents = " << nEvents << endl;
//Get length of run from UNBLINDED TIME
float runLengthBlind[2] = {0.};
float runLengthTrue = 0.;
Tin->GetEvent(nEvents-1);
runLengthTrue = S83028*scalerCountsToTime;
runLengthBlind[0] = Clk0*scalerCountsToTime;
runLengthBlind[1] = Clk1*scalerCountsToTime;
//Histograms to hold UCNMonRate
int binWidth = 10;
int nbins = (int)(runLengthTrue+20.)/binWidth;
t->UCN_Mon_1_Rate = new TH1F("UCN_Mon_1_Rate","UCN Mon 1 Rate",nbins, 0., (float)nbins*binWidth);
t->UCN_Mon_2_Rate = new TH1F("UCN_Mon_2_Rate","UCN Mon 2 Rate",nbins, 0., (float)nbins*binWidth);
t->UCN_Mon_3_Rate = new TH1F("UCN_Mon_3_Rate","UCN Mon 3 Rate",nbins, 0., (float)nbins*binWidth);
t->UCN_Mon_4_Rate = new TH1F("UCN_Mon_4_Rate","UCN Mon 4 Rate",nbins, 0., (float)nbins*binWidth);
// Loop over events
for (int i=0; i<nEvents; i++) {
Tin->GetEvent(i);
if ( i%10000==0 ) std::cout << i << std::endl;
t->xE.nClipped = t->yE.nClipped = t->xW.nClipped = t->yW.nClipped = 0;
Int_t iSis00 = (int) Sis00;
// Calculate pedestal-subtracted PMT QADC values
for (int j=0; j<8; j++) {
pmt[j] = ((double) Qadc[j]) - pedQadc[j];
}
// Set cathode values to non-ped subtracted values
for (int j=0; j<32; j++) {
if (j<16) {
t->Cathodes_Ey[j] = (double)Pdc2[j];
t->Cathodes_Wy[j] = (double)Padc[j];
}
else {
t->Cathodes_Ex[j-16] = (double)Pdc2[j];
t->Cathodes_Wx[j-16] = (double)Padc[j];
}
}
//////////////////////////////////////////////////////////
// For making a max Cathode signal cut
double CathMaxCut = 300.; // This is pedestal subtracted
MWPCCathodeHandler cathResp(t->Cathodes_Ex,t->Cathodes_Ey,t->Cathodes_Wx,t->Cathodes_Wy,&pedPdc2[16],&pedPdc2[0],&pedPadc[16],&pedPadc[0]);
//Get the max signal in each plane (ped subtracted)
double cathMaxEX = cathResp.getMaxSignalEX();
double cathMaxEY = cathResp.getMaxSignalEY();
double cathMaxWX = cathResp.getMaxSignalWX();
double cathMaxWY = cathResp.getMaxSignalWY();
double maxCathSumE = cathMaxEX + cathMaxEY;
double maxCathSumW = cathMaxWX + cathMaxWY;
//Also saving one set of positions for making position maps
cathResp.findAllPositions(true,false);
std::vector<double> posex = cathResp.getPosEX();
std::vector<double> posey = cathResp.getPosEY();
std::vector<double> poswx = cathResp.getPosWX();
std::vector<double> poswy = cathResp.getPosWY();
t->xE.center = posex[0] * positionProjection;
t->yE.center = posey[0] * positionProjection;
t->xW.center = poswx[0] * positionProjection;
t->yW.center = poswy[0] * positionProjection;
t->xE.width = posex[1] * positionProjection;
t->yE.width = posey[1] * positionProjection;
t->xW.width = poswx[1] * positionProjection;
t->yW.width = poswy[1] * positionProjection;
t->xE.height = posex[2];
t->yE.height = posey[2];
t->xW.height = poswx[2];
t->yW.height = poswy[2];
t->xE.mult = cathResp.getMultEX();
t->yE.mult = cathResp.getMultEY();
t->xW.mult = cathResp.getMultWX();
t->yW.mult = cathResp.getMultWY();
t->xE.nClipped = cathResp.getnClippedEX();
t->yE.nClipped = cathResp.getnClippedEY();
t->xW.nClipped = cathResp.getnClippedWX();
t->yW.nClipped = cathResp.getnClippedWY();
t->xE.maxWire = cathResp.getMaxWireEX();
t->yE.maxWire = cathResp.getMaxWireEY();
t->xW.maxWire = cathResp.getMaxWireWX();
t->yW.maxWire = cathResp.getMaxWireWY();
t->xE.maxValue = cathResp.getMaxSignalEX();
t->yE.maxValue = cathResp.getMaxSignalEY();
t->xW.maxValue = cathResp.getMaxSignalWX();
t->yW.maxValue = cathResp.getMaxSignalWY();
t->xE.cathSum = cathResp.getCathSumEX();
t->yE.cathSum = cathResp.getCathSumEY();
t->xW.cathSum = cathResp.getCathSumWX();
t->yW.cathSum = cathResp.getCathSumWY();
t->CathSumE = t->xE.cathSum + t->yE.cathSum;
t->CathSumW = t->xW.cathSum + t->yW.cathSum;
t->CathMaxE = t->xE.maxValue + t->yE.maxValue;
t->CathMaxW = t->xW.maxValue + t->yW.maxValue;
t->xE.rawCenter = cathResp.getWirePosEX(t->xE.maxWire);
t->yE.rawCenter = cathResp.getWirePosEY(t->yE.maxWire);
t->xW.rawCenter = cathResp.getWirePosWX(t->xW.maxWire);
t->yW.rawCenter = cathResp.getWirePosWY(t->yW.maxWire);
///////////////////////////////////////////////////////////
// Calculate pedestal-subtracted MWPC Anode PADC values
AnodeE = ((double) Pdc30) - pedPdc30;
AnodeW = ((double) Pdc34) - pedPdc34;
// UCN monitor events
bool UCNMonitorTrigger = false;
float time = S83028*scalerCountsToTime;
if (iSis00==260) {t->UCN_Mon_1_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==516) {t->UCN_Mon_2_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==1028) {t->UCN_Mon_3_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==2052) {t->UCN_Mon_4_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
// Events with a muon hit
bool muonHitEast = false;
bool muonHitWest = false;
if ( (((double) Qadc8) > cutEastBackingVetoQADC) ||
(((double) Tdc018) > cutEastBackingVetoTDC) ||
(((double) Qadc9) > cutEastTopVetoQADC) ||
(((double) Tdc019) > cutEastTopVetoTDC) ||
(((double) Pdc313) > cutEastDriftTubeTAC) ) {
muonHitEast = true;
}
if ( (((double) Qadc10) > cutWestBackingVetoQADC) ||
(((double) Tdc020) > cutWestBackingVetoTDC) ||
(((double) Pdc315) > cutWestDriftTubeTAC) ) {
muonHitWest = true;
}
t->TaggedBackE = (((double) Qadc8) > cutEastBackingVetoQADC || ((double) Tdc018) > cutEastBackingVetoTDC)?true:false;
t->TaggedBackW = (((double) Qadc10) > cutWestBackingVetoQADC || ((double) Tdc020) > cutEastBackingVetoTDC)?true:false;
t->TaggedTopE = (((double) Qadc9) > cutEastTopVetoQADC || ((double) Tdc019) > cutEastTopVetoTDC)?true:false;
t->TaggedTopW = false;
t->TaggedDriftE = (((double) Pdc313) > cutEastDriftTubeTAC)?true:false;
t->TaggedDriftW = (((double) Pdc315) > cutWestDriftTubeTAC)?true:false;
t->EastBackADC = (double) Qadc8;
t->WestBackADC = (double) Qadc10;
t->EastBackTDC = (double) Tdc018;
t->WestBackTDC = (double) Tdc020;
t->EastDriftVetoADC = (double) Pdc313;
t->WestDriftVetoADC = (double) Pdc315;
t->EastTopVetoADC = (double) Qadc9;
t->EastTopVetoTDC = (double) Tdc019;
// LED trigger events
bool LEDTrigger = false;
if ( (iSis00 == 128) || (iSis00 == 129) || (iSis00 == 130) || (iSis00 == 131) || (iSis00 == 163) ) {
LEDTrigger = true;
}
// Bi pulser trigger events
bool bismuthPulser = false;
if (iSis00 == 32) bismuthPulser = true;
// Scintillator events
bool mwpcHitEast = false;
bool mwpcHitWest = false;
bool scintillatorHitEast = false;
bool scintillatorHitWest = false;
bool scintillatorHitBoth = false;
bool coincidenceEast = false;
bool coincidenceWest = false;
bool scintillatorHitFirstEast = false;
bool scintillatorHitFirstWest = false;
bool scintillatorHitBothBad = false;
bool triggerEast = false;
bool triggerWest = false;
t->PassedAnoE = t->PassedAnoW = false;
t->PassedCathE = t->PassedCathW = false;
if ( ((double) Pdc30) > cutEastAnode) { t->PassedAnoE=true; }
if ( ((double) Pdc34) > cutWestAnode) { t->PassedAnoW=true; }
// Using the cathode sum of max wires to determine MWPC trigger
if ( maxCathSumE > CathMaxCut ) { mwpcHitEast = true; t->PassedCathE=true; }
if ( maxCathSumW > CathMaxCut ) { mwpcHitWest = true; t->PassedCathW=true; }
double timeEastTwoFold = ((double) Tdc016)*tdcChannelToTime;
double timeWestTwoFold = ((double) Tdc017)*tdcChannelToTime;
if (timeEastTwoFold > 0.*tdcChannelToTime) scintillatorHitEast = true;
if (timeWestTwoFold > 0.*tdcChannelToTime) scintillatorHitWest = true;
if (scintillatorHitEast && scintillatorHitWest) {
scintillatorHitBoth = true;
if ( (timeEastTwoFold > cutEastTwoFold) && (timeWestTwoFold < cutWestTwoFold) ) {
scintillatorHitFirstEast = true;
}
else if ( (timeEastTwoFold < cutEastTwoFold) && (timeWestTwoFold > cutWestTwoFold) ) {
scintillatorHitFirstWest = true;
}
else if ( (timeEastTwoFold > cutEastTwoFold) && (timeWestTwoFold > cutWestTwoFold) ) {
scintillatorHitBothBad = true;
}
else if ( (timeEastTwoFold < cutEastTwoFold) && (timeWestTwoFold < cutWestTwoFold) ) {
scintillatorHitBothBad = true;
}
}
if (mwpcHitEast && scintillatorHitEast) coincidenceEast = true;
if (mwpcHitWest && scintillatorHitWest) coincidenceWest = true;
// Event PID logic
type = 4; //not an electron event
side = 2; //No scintillator triggers
if (UCNMonitorTrigger) PID = 5;
else if (LEDTrigger) PID = 3;
else if (muonHitEast || muonHitWest) PID = 2;
else if (bismuthPulser) PID = 4;
else if ( (scintillatorHitEast && !mwpcHitEast && !scintillatorHitWest && !mwpcHitWest) ||
(!scintillatorHitEast && !mwpcHitEast && scintillatorHitWest && !mwpcHitWest) ) { PID = 0; side = scintillatorHitEast ? 0 : 1; }
else if ( (coincidenceEast && !scintillatorHitWest && !mwpcHitWest) ||
(!scintillatorHitEast && !mwpcHitEast && coincidenceWest) ||
(coincidenceEast && coincidenceWest) ||
(coincidenceEast && !scintillatorHitWest && mwpcHitWest) ||
(!scintillatorHitEast && mwpcHitEast && coincidenceWest) ) PID = 1;
else PID = 6;
if (PID == 1) {
if (coincidenceEast && !scintillatorHitWest && !mwpcHitWest) {
type = 0;
side = 0;
}
if (!scintillatorHitEast && !mwpcHitEast && coincidenceWest) {
type = 0;
side = 1;
}
if (coincidenceEast && coincidenceWest) {
type = 1;
if (scintillatorHitFirstEast) side = 0;
if (scintillatorHitFirstWest) side = 1;
}
if (coincidenceEast && !scintillatorHitWest && mwpcHitWest) {
type = 2;
side = 0;
}
if (!scintillatorHitEast && mwpcHitEast && coincidenceWest) {
type = 2;
side = 1;
}
}
//////////////////////////////////////////////////////////////////////////////////
/* Swank's addition to the UK PA. (2 of 2)
this seems like a good spot since its around the position calculation.
*/
int xeRC,yeRC,xwRC,ywRC;
WireChamberResponse * WCR = new WireChamberResponse();
//changing the length 32 double array to length 16 float array. using variables defined in WCR.
for(int j = 0; j<16; j++)
{
WCR->cathex[j]=Pdc2[16+j];
WCR->cathey[j]=Pdc2[j];
WCR->cathwx[j]=Padc[16+j];
WCR->cathwy[j]=Padc[j];
}
xeRC=WCR->ResponseType(WCR->cathex); //response class x co-ordinate, East.
yeRC=WCR->ResponseType(WCR->cathey); //response class y co-ordinate, East.
xwRC=WCR->ResponseType(WCR->cathwx); //response class x co-ordinate, West.
ywRC=WCR->ResponseType(WCR->cathwy); //response class y co-ordinate, West.
delete WCR;
/*
End of swank's addtion (2 of 2)
*/
////////////////////////////////////////////////////////////////////////////////////
// Calculate MWPC positions for electron events
// Pass Everything to output tree
t->TriggerNum = (int) Number;
t->EvtN = i;
t->Sis00 = iSis00;
t->DeltaT = ((double)Delt0)*scalerCountsToTime;
t->Tof = (double) S8200;
t->TimeE = Clk0*scalerCountsToTime;
t->TimeW = Clk1*scalerCountsToTime;
t->Time = S83028*scalerCountsToTime;
t->badTimeFlag = 0;
t->oldTimeE = Clk0*scalerCountsToTime;
t->oldTimeW = Clk1*scalerCountsToTime;
t->oldTime = S83028*scalerCountsToTime;
t->TDCE = (double) Tdc016;
t->TDCW = (double) Tdc017;
t->TDCE1 = (double) Tdc00;
t->TDCE2 = (double) Tdc01;
t->TDCE3 = (double) Tdc02;
t->TDCE4 = (double) Tdc03;
t->TDCW1 = (double) Tdc08;
t->TDCW2 = (double) Tdc09;
t->TDCW3 = (double) Tdc010;
t->TDCW4 = (double) Tdc011;
//Wirechambers
t->xE.err = 0.;
t->xE.rawCenter = 0.;
t->yE.err = 0.;
t->yE.rawCenter = 0.;
t->xW.err = 0.;
t->xW.rawCenter = 0.;
t->yW.err = 0.;
t->yW.rawCenter = 0.;
t->ScintE.q1 = pmt[0];
t->ScintE.q2 = pmt[1];
t->ScintE.q3 = pmt[2];
t->ScintE.q4 = pmt[3];
t->ScintE.e1=t->ScintE.de1=t->ScintE.e2=t->ScintE.de2=t->ScintE.e3=t->ScintE.de3=t->ScintE.e4=t->ScintE.de4=0.;
t->ScintE.energy=t->ScintE.denergy=0.;
t->ScintE.nPE1=t->ScintE.nPE2=t->ScintE.nPE3=t->ScintE.nPE4=0.;
t->ScintW.q1 = pmt[4];
t->ScintW.q2 = pmt[5];
t->ScintW.q3 = pmt[6];
t->ScintW.q4 = pmt[7];
t->ScintW.e1=t->ScintW.de1=t->ScintW.e2=t->ScintW.de2=t->ScintW.e3=t->ScintW.de3=t->ScintW.e4=t->ScintW.de4=0.;
t->ScintW.energy=t->ScintW.denergy=0.;
t->ScintW.nPE1=t->ScintW.nPE2=t->ScintW.nPE3=t->ScintW.nPE4=0.;
t->ScintE_bare.q1 = pmt[0];
t->ScintE_bare.q2 = pmt[1];
t->ScintE_bare.q3 = pmt[2];
t->ScintE_bare.q4 = pmt[3];
t->ScintE_bare.e1=t->ScintE_bare.de1=t->ScintE_bare.e2=t->ScintE_bare.de2=t->ScintE_bare.e3=t->ScintE_bare.de3=t->ScintE_bare.e4=t->ScintE_bare.de4=0.;
t->ScintE_bare.energy=t->ScintE_bare.denergy=0.;
t->ScintE_bare.nPE1=t->ScintE_bare.nPE2=t->ScintE_bare.nPE3=t->ScintE_bare.nPE4=0.;
t->ScintW_bare.q1 = pmt[4];
t->ScintW_bare.q2 = pmt[5];
t->ScintW_bare.q3 = pmt[6];
t->ScintW_bare.q4 = pmt[7];
t->ScintW_bare.e1=t->ScintW_bare.de1=t->ScintW_bare.e2=t->ScintW_bare.de2=t->ScintW_bare.e3=t->ScintW_bare.de3=t->ScintW_bare.e4=t->ScintW_bare.de4=0.;
t->ScintW_bare.energy=t->ScintW_bare.denergy=0.;
t->ScintW_bare.nPE1=t->ScintW_bare.nPE2=t->ScintW_bare.nPE3=t->ScintW_bare.nPE4=0.;
t->EvisE = t->EvisW = 0.;
t->CathSumE = t->xE.cathSum+t->yE.cathSum;
t->CathSumW = t->xW.cathSum+t->yW.cathSum;
t->CathMaxE = (t->xE.maxValue>t->yE.maxValue)?t->yE.maxValue:t->xE.maxValue;
t->CathMaxW = (t->xW.maxValue>t->yW.maxValue)?t->yW.maxValue:t->xW.maxValue;
t->EMWPC_E = t->EMWPC_W = 0.;
t->AnodeE = AnodeE; // Pedestal subtracted
t->AnodeW = AnodeW;
t->EvnbGood = t->BkhfGood = true;
for (Int_t i = 0; i<5; i++) {
if ((int)Evnb[i]-t->TriggerNum) t->EvnbGood = false;
if ((int)Bkhf[i]!=17) t->BkhfGood = false;
}
t->xeRC = xeRC;
t->yeRC = yeRC;
t->xwRC = xwRC;
t->ywRC = ywRC;
t->PID = PID;
t->Type = type;
t->Side = side;
t->ProbIII = 0.;
t->Erecon = 0.;
t->Erecon_ee = 0.;
t->old_Erecon = 0.;
t->gaus_Erecon = 0.;
/*timeE_BB = Clk2*scalerCountsToTime;
timeW_BB = Clk3*scalerCountsToTime;
UBtime = S83028*scalerCountsToTime;
UBtime_BB = S8200*scalerCountsToTime;
twoFoldE = Tdc016;
twoFoldW = Tdc017;*/
t->fillOutputTree();
}
fileIn->Close();
// Write output ntuple
t->writeOutputFile();
delete t;
if ( checkIfReplayFileIsGood(std::string(tempOut)) != 1 ) {
std::ofstream badRuns("badRuns.txt", std::fstream::app);
badRuns << argv[1] << "\n";
badRuns.close();
}
return 0;
}
int main(int argc, char *argv[])
{
cout.setf(ios::fixed, ios::floatfield);
cout.precision(12);
TH1::AddDirectory(kFALSE);
cout << "Run " << argv[1] << " ..." << endl;
// Read cuts file
char tempFileCuts[500];
sprintf(tempFileCuts, "%s/cuts_%s.dat", getenv("CUTS"),argv[1]);
cout << "... Reading: " << tempFileCuts << endl;
ifstream fileCuts(tempFileCuts);
fileCuts >> cutBeamBurstTime >> comment;
fileCuts >> nCutsTimeWindows >> comment;
if (nCutsTimeWindows > 0) {
for (int i=0; i<nCutsTimeWindows; i++) {
fileCuts >> cutTimeWindowLower[i] >> cutTimeWindowUpper[i];
}
}
fileCuts >> cutEastAnode >> comment;
fileCuts >> cutWestAnode >> comment;
fileCuts >> cutEastTwoFold >> comment;
fileCuts >> cutWestTwoFold >> comment;
fileCuts >> cutEastTopVetoQADC >> comment;
fileCuts >> cutEastTopVetoTDC >> comment;
fileCuts >> cutEastDriftTubeTAC >> comment;
fileCuts >> cutWestDriftTubeTAC >> comment;
fileCuts >> cutEastBackingVetoQADC >> comment;
fileCuts >> cutEastBackingVetoTDC >> comment;
fileCuts >> cutWestBackingVetoQADC >> comment;
fileCuts >> cutWestBackingVetoTDC >> comment;
cout << "... Beam Burst T0 Cut: " << cutBeamBurstTime << endl;
cout << "... Number of Time Windows Cuts: " << nCutsTimeWindows << endl;
if (nCutsTimeWindows > 0) {
for (int i=0; i<nCutsTimeWindows; i++) {
cout << " [" << cutTimeWindowLower[i] << ", " << cutTimeWindowUpper[i] << "]" << endl;
}
}
cout << "... East MWPC Anode Cut: " << cutEastAnode << endl;
cout << "... West MWPC Anode Cut: " << cutWestAnode << endl;
cout << "... East Scintillator Two-Fold Trigger Cut: " << cutEastTwoFold << endl;
cout << "... West Scintillator Two-Fold Trigger Cut: " << cutWestTwoFold << endl;
cout << "... East Top Veto QADC Cut: " << cutEastTopVetoQADC << endl;
cout << "... East Top Veto TDC Cut: " << cutEastTopVetoTDC << endl;
cout << "... East Drift Tube TAC Cut: " << cutEastDriftTubeTAC << endl;
cout << "... West Drift Tube TAC Cut: " << cutWestDriftTubeTAC << endl;
cout << "... East Backing Veto QADC Cut: " << cutEastBackingVetoQADC << endl;
cout << "... East Backing Veto TDC Cut: " << cutEastBackingVetoTDC << endl;
cout << "... West Backing Veto QADC Cut: " << cutWestBackingVetoQADC << endl;
cout << "... West Backing Veto TDC Cut: " << cutWestBackingVetoTDC << endl;
// Read pedestals file
char tempFilePed[500];
int iRun;
sprintf(tempFilePed, "%s/pedestals_%s.dat", getenv("PEDESTALS"), argv[1]);
cout << "... Reading: " << tempFilePed << endl;
ifstream filePed(tempFilePed);
for (int i=0; i<8; i++) {
filePed >> iRun >> pedQadc[i];
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPdc2[i];
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPadc[i];
}
//filePed >> iRun >> pedPdc30;
//filePed >> iRun >> pedPdc34;
//cout << iRun << " " << pedPdc30 << endl;
//cout << iRun << " " << pedPdc34 << endl;
// Open output ntuple
char tempOut[500];
sprintf(tempOut, "%s/replay_pass1_%s.root",getenv("REPLAY_PASS1"), argv[1]);
//sprintf(tempOut, "replay_pass1_%s.root", argv[1]);
DataTree t;// = new DataTree();
t.makeOutputTree(std::string(tempOut),"pass1");
// East MWPC y
posPdc2[0] = 76.20;
posPdc2[1] = 66.04;
posPdc2[2] = 55.88;
posPdc2[3] = 45.72;
posPdc2[4] = 35.56;
posPdc2[5] = 25.40;
posPdc2[6] = 15.24;
posPdc2[7] = 5.08;
posPdc2[8] = -5.08;
posPdc2[9] = -15.24;
posPdc2[10] = -25.40;
posPdc2[11] = -35.56;
posPdc2[12] = -45.72;
posPdc2[13] = -55.88;
posPdc2[14] = -66.04;
posPdc2[15] = -76.20;
// East MWPC x
posPdc2[16] = 76.20;
posPdc2[17] = 66.04;
posPdc2[18] = 55.88;
posPdc2[19] = 45.72;
posPdc2[20] = 35.56;
posPdc2[21] = 25.40;
posPdc2[22] = 15.24;
posPdc2[23] = 5.08;
posPdc2[24] = -5.08;
posPdc2[25] = -15.24;
posPdc2[26] = -25.40;
posPdc2[27] = -35.56;
posPdc2[28] = -45.72;
posPdc2[29] = -55.88;
posPdc2[30] = -66.04;
posPdc2[31] = -76.20;
// West MWPC y
posPadc[0] = 76.20;
posPadc[1] = 66.04;
posPadc[2] = 55.88;
posPadc[3] = 45.72;
posPadc[4] = 35.56;
posPadc[5] = 25.40;
posPadc[6] = 15.24;
posPadc[7] = 5.08;
posPadc[8] = -5.08;
posPadc[9] = -15.24;
posPadc[10] = -25.40;
posPadc[11] = -35.56;
posPadc[12] = -45.72;
posPadc[13] = -55.88;
posPadc[14] = -66.04;
posPadc[15] = -76.20;
// West MWPC x
posPadc[16] = -76.20;
posPadc[17] = -66.04;
posPadc[18] = -55.88;
posPadc[19] = -45.72;
posPadc[20] = -35.56;
posPadc[21] = -25.40;
posPadc[22] = -15.24;
posPadc[23] = -5.08;
posPadc[24] = 5.08;
posPadc[25] = 15.24;
posPadc[26] = 25.40;
posPadc[27] = 35.56;
posPadc[28] = 45.72;
posPadc[29] = 55.88;
posPadc[30] = 66.04;
posPadc[31] = 76.20;
// Open input ntuple
char tempIn[500];
sprintf(tempIn, "/extern/mabrow05/ucna/rawdata/full%s.root", argv[1]);
TFile *fileIn = new TFile(tempIn, "READ");
TTree *Tin = (TTree*)(fileIn->Get("h1"));
// Variables
Tin->SetBranchAddress("Pdc30", &Pdc30);
Tin->SetBranchAddress("Pdc34", &Pdc34);
Tin->SetBranchAddress("Tdc016", &Tdc016);
Tin->SetBranchAddress("Tdc017", &Tdc017);
Tin->SetBranchAddress("Tdc00", &Tdc00);
Tin->SetBranchAddress("Tdc01", &Tdc01);
Tin->SetBranchAddress("Tdc02", &Tdc02);
Tin->SetBranchAddress("Tdc03", &Tdc03);
Tin->SetBranchAddress("Tdc08", &Tdc08);
Tin->SetBranchAddress("Tdc09", &Tdc09);
Tin->SetBranchAddress("Tdc010", &Tdc010);
Tin->SetBranchAddress("Tdc011", &Tdc011);
Tin->SetBranchAddress("Sis00", &Sis00);
Tin->SetBranchAddress("Qadc0", &Qadc[0]);
Tin->SetBranchAddress("Qadc1", &Qadc[1]);
Tin->SetBranchAddress("Qadc2", &Qadc[2]);
Tin->SetBranchAddress("Qadc3", &Qadc[3]);
Tin->SetBranchAddress("Qadc4", &Qadc[4]);
Tin->SetBranchAddress("Qadc5", &Qadc[5]);
Tin->SetBranchAddress("Qadc6", &Qadc[6]);
Tin->SetBranchAddress("Qadc7", &Qadc[7]);
Tin->SetBranchAddress("Pdc20", &Pdc2[0]);
Tin->SetBranchAddress("Pdc21", &Pdc2[1]);
Tin->SetBranchAddress("Pdc22", &Pdc2[2]);
Tin->SetBranchAddress("Pdc23", &Pdc2[3]);
Tin->SetBranchAddress("Pdc24", &Pdc2[4]);
Tin->SetBranchAddress("Pdc25", &Pdc2[5]);
Tin->SetBranchAddress("Pdc26", &Pdc2[6]);
Tin->SetBranchAddress("Pdc27", &Pdc2[7]);
Tin->SetBranchAddress("Pdc28", &Pdc2[8]);
Tin->SetBranchAddress("Pdc29", &Pdc2[9]);
Tin->SetBranchAddress("Pdc210", &Pdc2[10]);
Tin->SetBranchAddress("Pdc211", &Pdc2[11]);
Tin->SetBranchAddress("Pdc212", &Pdc2[12]);
Tin->SetBranchAddress("Pdc213", &Pdc2[13]);
Tin->SetBranchAddress("Pdc214", &Pdc2[14]);
Tin->SetBranchAddress("Pdc215", &Pdc2[15]);
Tin->SetBranchAddress("Pdc216", &Pdc2[16]);
Tin->SetBranchAddress("Pdc217", &Pdc2[17]);
Tin->SetBranchAddress("Pdc218", &Pdc2[18]);
Tin->SetBranchAddress("Pdc219", &Pdc2[19]);
Tin->SetBranchAddress("Pdc220", &Pdc2[20]);
Tin->SetBranchAddress("Pdc221", &Pdc2[21]);
Tin->SetBranchAddress("Pdc222", &Pdc2[22]);
Tin->SetBranchAddress("Pdc223", &Pdc2[23]);
Tin->SetBranchAddress("Pdc224", &Pdc2[24]);
Tin->SetBranchAddress("Pdc225", &Pdc2[25]);
Tin->SetBranchAddress("Pdc226", &Pdc2[26]);
Tin->SetBranchAddress("Pdc227", &Pdc2[27]);
Tin->SetBranchAddress("Pdc228", &Pdc2[28]);
Tin->SetBranchAddress("Pdc229", &Pdc2[29]);
Tin->SetBranchAddress("Pdc230", &Pdc2[30]);
Tin->SetBranchAddress("Pdc231", &Pdc2[31]);
Tin->SetBranchAddress("Padc0", &Padc[0]);
Tin->SetBranchAddress("Padc1", &Padc[1]);
Tin->SetBranchAddress("Padc2", &Padc[2]);
Tin->SetBranchAddress("Padc3", &Padc[3]);
Tin->SetBranchAddress("Padc4", &Padc[4]);
Tin->SetBranchAddress("Padc5", &Padc[5]);
Tin->SetBranchAddress("Padc6", &Padc[6]);
Tin->SetBranchAddress("Padc7", &Padc[7]);
Tin->SetBranchAddress("Padc8", &Padc[8]);
Tin->SetBranchAddress("Padc9", &Padc[9]);
Tin->SetBranchAddress("Padc10", &Padc[10]);
Tin->SetBranchAddress("Padc11", &Padc[11]);
Tin->SetBranchAddress("Padc12", &Padc[12]);
Tin->SetBranchAddress("Padc13", &Padc[13]);
Tin->SetBranchAddress("Padc14", &Padc[14]);
Tin->SetBranchAddress("Padc15", &Padc[15]);
Tin->SetBranchAddress("Padc16", &Padc[16]);
Tin->SetBranchAddress("Padc17", &Padc[17]);
Tin->SetBranchAddress("Padc18", &Padc[18]);
Tin->SetBranchAddress("Padc19", &Padc[19]);
Tin->SetBranchAddress("Padc20", &Padc[20]);
Tin->SetBranchAddress("Padc21", &Padc[21]);
Tin->SetBranchAddress("Padc22", &Padc[22]);
Tin->SetBranchAddress("Padc23", &Padc[23]);
Tin->SetBranchAddress("Padc24", &Padc[24]);
Tin->SetBranchAddress("Padc25", &Padc[25]);
Tin->SetBranchAddress("Padc26", &Padc[26]);
Tin->SetBranchAddress("Padc27", &Padc[27]);
Tin->SetBranchAddress("Padc28", &Padc[28]);
Tin->SetBranchAddress("Padc29", &Padc[29]);
Tin->SetBranchAddress("Padc30", &Padc[30]);
Tin->SetBranchAddress("Padc31", &Padc[31]);
Tin->SetBranchAddress("S83028", &S83028);
Tin->SetBranchAddress("S8200", &S8200);
Tin->SetBranchAddress("Clk0", &Clk0);
Tin->SetBranchAddress("Clk1", &Clk1);
Tin->SetBranchAddress("Clk2", &Clk2);
Tin->SetBranchAddress("Clk3", &Clk3);
Tin->SetBranchAddress("Pdc38", &Pdc38);
Tin->SetBranchAddress("Pdc39", &Pdc39);
Tin->SetBranchAddress("Pdc310", &Pdc310);
Tin->SetBranchAddress("Pdc311", &Pdc311);
Tin->SetBranchAddress("Qadc9", &Qadc9);
Tin->SetBranchAddress("Tdc019", &Tdc019);
Tin->SetBranchAddress("Pdc313", &Pdc313);
Tin->SetBranchAddress("Pdc315", &Pdc315);
Tin->SetBranchAddress("Qadc8", &Qadc8);
Tin->SetBranchAddress("Tdc018", &Tdc018);
Tin->SetBranchAddress("Qadc10", &Qadc10);
Tin->SetBranchAddress("Tdc020", &Tdc020);
Tin->SetBranchAddress("Number", &Number);
Tin->SetBranchAddress("Delt0", &Delt0);
Tin->SetBranchAddress("Evnb0", &Evnb[0]);
Tin->SetBranchAddress("Evnb1", &Evnb[1]);
Tin->SetBranchAddress("Evnb2", &Evnb[2]);
Tin->SetBranchAddress("Evnb3", &Evnb[3]);
Tin->SetBranchAddress("Evnb4", &Evnb[4]);
Tin->SetBranchAddress("Bkhf0", &Bkhf[0]);
Tin->SetBranchAddress("Bkhf1", &Bkhf[1]);
Tin->SetBranchAddress("Bkhf2", &Bkhf[2]);
Tin->SetBranchAddress("Bkhf3", &Bkhf[3]);
Tin->SetBranchAddress("Bkhf4", &Bkhf[4]);
int nEvents = Tin->GetEntries();
cout << "... Processing nEvents = " << nEvents << endl;
//Get length of run from UNBLINDED TIME
float runLengthBlind[2] = {0.};
float runLengthTrue = 0.;
Tin->GetEvent(nEvents-1);
runLengthTrue = S83028*scalerCountsToTime;
runLengthBlind[0] = Clk0*scalerCountsToTime;
runLengthBlind[1] = Clk1*scalerCountsToTime;
//Histograms to hold UCNMonRate
int binWidth = 10;
int nbins = (int)(runLengthTrue+20.)/binWidth;
t.UCN_Mon_1_Rate = new TH1F("UCN_Mon_1_Rate","UCN Mon 1 Rate",nbins, 0., (float)nbins*binWidth);
t.UCN_Mon_2_Rate = new TH1F("UCN_Mon_2_Rate","UCN Mon 2 Rate",nbins, 0., (float)nbins*binWidth);
t.UCN_Mon_3_Rate = new TH1F("UCN_Mon_3_Rate","UCN Mon 3 Rate",nbins, 0., (float)nbins*binWidth);
t.UCN_Mon_4_Rate = new TH1F("UCN_Mon_4_Rate","UCN Mon 4 Rate",nbins, 0., (float)nbins*binWidth);
// Loop over events
for (int i=0; i<nEvents; i++) {
Tin->GetEvent(i);
Int_t iSis00 = (int) Sis00;
// Calculate pedestal-subtracted PMT QADC values
for (int j=0; j<8; j++) {
pmt[j] = ((double) Qadc[j]) - pedQadc[j];
}
// Calculate pedestal-subtracted MWPC cathode PADC values
for (int j=0; j<32; j++) {
cathodeEast[j] = ((double) Pdc2[j]) - pedPdc2[j];
cathodeWest[j] = ((double) Padc[j]) - pedPadc[j];
}
// Calculate pedestal-subtracted MWPC Anode PADC values
//Took this out for now. We are comparing against a cut instead...
//AnodeE = ((double) Pdc30) - pedPdc30;
//AnodeW = ((double) Pdc34) - pedPdc34;
// UCN monitor events
bool UCNMonitorTrigger = false;
float time = S83028*scalerCountsToTime;
if (iSis00==260) {t.UCN_Mon_1_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==516) {t.UCN_Mon_2_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==1028) {t.UCN_Mon_3_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
else if (iSis00==2052) {t.UCN_Mon_4_Rate->Fill(time,1./binWidth); UCNMonitorTrigger = true;}
// Events with a muon hit
bool muonHitEast = false;
bool muonHitWest = false;
if ( (((double) Qadc8) > cutEastBackingVetoQADC) ||
(((double) Tdc018) > cutEastBackingVetoTDC) ||
(((double) Qadc9) > cutEastTopVetoQADC) ||
(((double) Tdc019) > cutEastTopVetoTDC) ||
(((double) Pdc313) > cutEastDriftTubeTAC) ) {
muonHitEast = true;
}
if ( (((double) Qadc10) > cutWestBackingVetoQADC) ||
(((double) Tdc020) > cutWestBackingVetoTDC) ||
(((double) Pdc315) > cutWestDriftTubeTAC) ) {
muonHitWest = true;
}
t.TaggedBackE = (((double) Qadc8) > cutEastBackingVetoQADC || ((double) Tdc018) > cutEastBackingVetoTDC)?true:false;
t.TaggedBackW = (((double) Qadc10) > cutWestBackingVetoQADC || ((double) Tdc020) > cutEastBackingVetoTDC)?true:false;
t.TaggedTopE = (((double) Qadc9) > cutEastTopVetoQADC || ((double) Tdc019) > cutEastTopVetoTDC)?true:false;
t.TaggedTopW = false;
t.TaggedDriftE = (((double) Pdc313) > cutEastDriftTubeTAC)?true:false;
t.TaggedDriftW = (((double) Pdc315) > cutWestDriftTubeTAC)?true:false;
t.EastBackADC = (double) Qadc8;
t.WestBackADC = (double) Qadc10;
t.EastBackTDC = (double) Tdc018;
t.WestBackTDC = (double) Tdc020;
t.EastDriftVetoADC = (double) Pdc313;
t.WestDriftVetoADC = (double) Pdc315;
t.EastTopVetoADC = (double) Qadc9;
t.EastTopVetoTDC = (double) Tdc019;
// LED trigger events
bool LEDTrigger = false;
if ( (iSis00 == 128) || (iSis00 == 129) || (iSis00 == 130) || (iSis00 == 131) || (iSis00 == 163) ) {
LEDTrigger = true;
}
// Bi pulser trigger events
bool bismuthPulser = false;
if (iSis00 == 32) bismuthPulser = true;
// Scintillator events
bool mwpcHitEast = false;
bool mwpcHitWest = false;
bool scintillatorHitEast = false;
bool scintillatorHitWest = false;
bool scintillatorHitBoth = false;
bool coincidenceEast = false;
bool coincidenceWest = false;
bool scintillatorHitFirstEast = false;
bool scintillatorHitFirstWest = false;
bool scintillatorHitBothBad = false;
bool triggerEast = false;
bool triggerWest = false;
if ( ((double) Pdc30) > cutEastAnode) {mwpcHitEast = true; t.PassedAnoE=true;}
if ( ((double) Pdc34) > cutWestAnode) {mwpcHitWest = true; t.PassedAnoW=true;}
double timeEastTwoFold = ((double) Tdc016)*tdcChannelToTime;
double timeWestTwoFold = ((double) Tdc017)*tdcChannelToTime;
if (timeEastTwoFold > 0.*tdcChannelToTime) scintillatorHitEast = true;
if (timeWestTwoFold > 0.*tdcChannelToTime) scintillatorHitWest = true;
if (scintillatorHitEast && scintillatorHitWest) {
scintillatorHitBoth = true;
if ( (timeEastTwoFold > cutEastTwoFold) && (timeWestTwoFold < cutWestTwoFold) ) {
scintillatorHitFirstEast = true;
}
if ( (timeEastTwoFold < cutEastTwoFold) && (timeWestTwoFold > cutWestTwoFold) ) {
scintillatorHitFirstWest = true;
}
if ( (timeEastTwoFold > cutEastTwoFold) && (timeWestTwoFold > cutWestTwoFold) ) {
scintillatorHitBothBad = true;
}
if ( (timeEastTwoFold < cutEastTwoFold) && (timeWestTwoFold < cutWestTwoFold) ) {
scintillatorHitBothBad = true;
}
}
if (mwpcHitEast && scintillatorHitEast) coincidenceEast = true;
if (mwpcHitWest && scintillatorHitWest) coincidenceWest = true;
// Event PID logic
if (UCNMonitorTrigger) PID = 5;
else if (LEDTrigger) PID = 3;
else if (muonHitEast || muonHitWest) PID = 2;
else if (bismuthPulser) PID = 4;
else if ( (scintillatorHitEast && !mwpcHitEast && !scintillatorHitWest && !mwpcHitWest) ||
(!scintillatorHitEast && !mwpcHitEast && scintillatorHitWest && !mwpcHitWest) ) PID = 0;
else if ( (coincidenceEast && !scintillatorHitWest && !mwpcHitWest) ||
(!scintillatorHitEast && !mwpcHitEast && coincidenceWest) ||
(coincidenceEast && coincidenceWest && !scintillatorHitBothBad) ||
(coincidenceEast && !scintillatorHitWest && mwpcHitWest) ||
(!scintillatorHitEast && mwpcHitEast && coincidenceWest) ) PID = 1;
else PID = 6;
type = -1;
side = -1;
if (PID == 1) {
if (coincidenceEast && !scintillatorHitWest && !mwpcHitWest) {
type = 0;
side = 0;
}
if (!scintillatorHitEast && !mwpcHitEast && coincidenceWest) {
type = 0;
side = 1;
}
if (coincidenceEast && coincidenceWest && !scintillatorHitBothBad) {
type = 1;
if (scintillatorHitFirstEast) side = 0;
if (scintillatorHitFirstWest) side = 1;
}
if (coincidenceEast && !scintillatorHitWest && mwpcHitWest) {
type = 2;
side = 0;
}
if (!scintillatorHitEast && mwpcHitEast && coincidenceWest) {
type = 2;
side = 1;
}
}
//////////////////////////////////////////////////////////////////////////////////
/* Swank's addition to the UK PA. (2 of 2)
this seems like a good spot since its around the position calculation.
*/
int xeRC,yeRC,xwRC,ywRC;
WireChamberResponse * WCR = new WireChamberResponse();
//changing the length 32 double array to length 16 float array. using variables defined in WCR.
for(int j = 0; j<16; j++)
{
WCR->cathex[j]=(float)cathodeEast[16+j];
WCR->cathey[j]=(float)cathodeEast[j];
WCR->cathwx[j]=(float)cathodeWest[16+j];
WCR->cathwy[j]=(float)cathodeWest[j];
}
xeRC=WCR->ResponseType(WCR->cathex); //response class x co-ordinate, East.
yeRC=WCR->ResponseType(WCR->cathey); //response class y co-ordinate, East.
xwRC=WCR->ResponseType(WCR->cathwx); //response class x co-ordinate, West.
ywRC=WCR->ResponseType(WCR->cathwy); //response class y co-ordinate, West.
/*
End of swank's addtion (2 of 2)
*/
////////////////////////////////////////////////////////////////////////////////////
// Calculate MWPC positions for electron events
xE = 0.;
yE = 0.;
xW = 0.;
yW = 0.;
posError = 0.;
double xMWPCEast = 0.;
double yMWPCEast = 0.;
double xMWPCWest = 0.;
double yMWPCWest = 0.;
double xMWPCEastSum = 0.;
double yMWPCEastSum = 0.;
double xMWPCWestSum = 0.;
double yMWPCWestSum = 0.;
double xEmax = 0., yEmax = 0., xWmax = 0., yWmax = 0.; //max adc on wire
int xEmaxWire=0, yEmaxWire =0, xWmaxWire=0, yWmaxWire=0; // max wire number
int xEmult = 0, yEmult = 0, xWmult = 0, yWmult = 0; //Num of wires over threshold
if (PID==1) {
for (int j=0; j<16; j++) {
if (cathodeEast[j+16] > 100.) {
xMWPCEast += cathodeEast[j+16]*posPdc2[j+16];
xMWPCEastSum += cathodeEast[j+16];
t.Cathodes_Ex[j] = cathodeEast[j+16];
xEmult++;
if (cathodeEast[j+16]>xEmax) {
xEmax = cathodeEast[j+16];
xEmaxWire = j;
}
}
if (cathodeEast[j] > 100.) {
yMWPCEast += cathodeEast[j]*posPdc2[j];
yMWPCEastSum += cathodeEast[j];
t.Cathodes_Ey[j] = cathodeEast[j];
yEmult++;
if (cathodeEast[j]>yEmax) {
yEmax = cathodeEast[j];
yEmaxWire = j;
}
}
if (cathodeWest[j+16] > 100.) {
xMWPCWest += cathodeWest[j+16]*posPadc[j+16];
xMWPCWestSum += cathodeWest[j+16];
t.Cathodes_Wx[j] = cathodeWest[j+16];
xWmult++;
if (cathodeWest[j+16]>xWmax) {
xWmax = cathodeWest[j+16];
xWmaxWire = j;
}
}
if (cathodeWest[j] > 100.) {
yMWPCWest += cathodeWest[j]*posPadc[j];
yMWPCWestSum += cathodeWest[j];
t.Cathodes_Wy[j] = cathodeEast[j];
yWmult++;
if (cathodeWest[j]>yWmax) {
yWmax = cathodeWest[j];
yWmaxWire = j;
}
}
}
if (xMWPCEastSum > 0.)
xMWPCEast = xMWPCEast / xMWPCEastSum;
if (yMWPCEastSum > 0.)
yMWPCEast = yMWPCEast / yMWPCEastSum;
if (xMWPCWestSum > 0.)
xMWPCWest = xMWPCWest / xMWPCWestSum;
if (yMWPCWestSum > 0.)
yMWPCWest = yMWPCWest / yMWPCWestSum;
if (mwpcHitEast && xMWPCEastSum > 0.)
xE = xMWPCEast * positionProjection;
if (mwpcHitEast && yMWPCEastSum > 0.)
yE = yMWPCEast * positionProjection;
if (mwpcHitWest && xMWPCWestSum > 0.)
xW = xMWPCWest * positionProjection;
if (mwpcHitWest && yMWPCWestSum > 0.)
yW = yMWPCWest * positionProjection;
}
// Pass Everything to output tree
t.TriggerNum = (int) Number;
t.EvtN = i;
t.Sis00 = iSis00;
t.DeltaT = ((double)Delt0)*scalerCountsToTime;
t.Tof = (double) S8200;
t.TimeE = Clk0*scalerCountsToTime;
t.TimeW = Clk1*scalerCountsToTime;
t.Time = S83028*scalerCountsToTime;
t.TDCE = (double) Tdc016;
t.TDCW = (double) Tdc017;
t.TDCE1 = (double) Tdc00;
t.TDCE2 = (double) Tdc01;
t.TDCE3 = (double) Tdc02;
t.TDCE4 = (double) Tdc03;
t.TDCW1 = (double) Tdc08;
t.TDCW2 = (double) Tdc09;
t.TDCW3 = (double) Tdc010;
t.TDCW4 = (double) Tdc011;
//Wirechambers
t.xE.center = xE;
t.xE.width = 0.;
t.xE.cathSum = xMWPCEastSum;
t.xE.maxValue = xEmax;
t.xE.maxWire = xEmaxWire;
t.xE.mult = xEmult;
t.xE.nClipped = 0;
t.xE.err = 0.;
t.xE.rawCenter = 0.;
t.xE.height = 0.;
t.yE.center = yE;
t.yE.width = 0.;
t.yE.cathSum = yMWPCEastSum;
t.yE.maxValue = yEmax;
t.yE.maxWire = yEmaxWire;
t.yE.mult = yEmult;
t.yE.nClipped = 0;
t.yE.err = 0.;
t.yE.rawCenter = 0.;
t.yE.height = 0.;
t.xW.center = xW;
t.xW.width = 0.;
t.xW.cathSum = xMWPCWestSum;
t.xW.maxValue = xWmax;
t.xW.maxWire = xWmaxWire;
t.xW.mult = xWmult;
t.xW.nClipped = 0;
t.xW.err = 0.;
t.xW.rawCenter = 0.;
t.xW.height = 0.;
t.yW.center = yW;
t.yW.width = 0.;
t.yW.cathSum = yMWPCWestSum;
t.yW.maxValue = yWmax;
t.yW.maxWire = yWmaxWire;
t.yW.mult = yWmult;
t.yW.nClipped = 0;
t.yW.err = 0.;
t.yW.rawCenter = 0.;
t.yW.height = 0.;
t.ScintE.q1 = pmt[0];
t.ScintE.q2 = pmt[1];
t.ScintE.q3 = pmt[2];
t.ScintE.q4 = pmt[3];
t.ScintE.e1=t.ScintE.de1=t.ScintE.e2=t.ScintE.de2=t.ScintE.e3=t.ScintE.de3=t.ScintE.e4=t.ScintE.de4=0.;
t.ScintE.energy=t.ScintE.denergy=0.;
t.ScintE.nPE1=t.ScintE.nPE2=t.ScintE.nPE3=t.ScintE.nPE4=0.;
t.ScintW.q1 = pmt[4];
t.ScintW.q2 = pmt[5];
t.ScintW.q3 = pmt[6];
t.ScintW.q4 = pmt[7];
t.ScintW.e1=t.ScintW.de1=t.ScintW.e2=t.ScintW.de2=t.ScintW.e3=t.ScintW.de3=t.ScintW.e4=t.ScintW.de4=0.;
t.ScintW.energy=t.ScintW.denergy=0.;
t.ScintW.nPE1=t.ScintW.nPE2=t.ScintW.nPE3=t.ScintW.nPE4=0.;
t.EvisE = t.EvisW = 0.;
t.CathSumE = t.xE.cathSum+t.yE.cathSum;
t.CathSumW = t.xW.cathSum+t.yW.cathSum;
t.CathMaxE = (t.xE.maxValue>t.yE.maxValue)?t.yE.maxValue:t.xE.maxValue;
t.CathMaxW = (t.xW.maxValue>t.yW.maxValue)?t.yW.maxValue:t.xW.maxValue;
t.EMWPC_E = t.EMWPC_W = 0.;
t.AnodeE = (double) Pdc30;
t.AnodeW = (double) Pdc34;
t.PassedCathE = t.PassedCathW = PID==1?true:false; //temporary holder for this
t.EvnbGood = t.BkhfGood = true;
for (Int_t i = 0; i<5; i++) {
if ((int)Evnb[i]-t.TriggerNum) t.EvnbGood = false;
if ((int)Bkhf[i]!=17) t.BkhfGood = false;
}
t.xeRC = xeRC;
t.yeRC = yeRC;
t.xwRC = xwRC;
t.ywRC = ywRC;
t.PID = PID;
t.Type = type;
t.Side = side;
t.ProbIII = 0.;
t.Erecon = 0.;
/*timeE_BB = Clk2*scalerCountsToTime;
timeW_BB = Clk3*scalerCountsToTime;
UBtime = S83028*scalerCountsToTime;
UBtime_BB = S8200*scalerCountsToTime;
twoFoldE = Tdc016;
twoFoldW = Tdc017;*/
t.fillOutputTree();
}
fileIn->Close();
//Now I want to create and store a few pertinent values in a file for later...
char tempFile[200];
sprintf(tempFile,"%s/runInfo_%s.dat",getenv("RUN_INFO_FILES"),argv[1]);
ofstream runInfo(tempFile);
std::cout << "Writing Info to " << tempFile << std::endl;
runInfo << "RunLengthEast\t" << std::setprecision(9) << runLengthBlind[0] << std::endl;
runInfo << "RunLengthWest\t" << std::setprecision(9) << runLengthBlind[1] << std::endl;
runInfo << "RunLengthTrue\t" << std::setprecision(9) << runLengthTrue << std::endl;
runInfo << "UCNMon4Integral\t" << std::setprecision(9) << t.UCN_Mon_4_Rate->Integral("width");
runInfo.close();
// Write output ntuple
t.writeOutputFile();
//fileOut->Close();
return 0;
}
int main(int argc, char *argv[])
{
if ( argc<2 || argc>3 ) {
std::cout << "USAGE: ./replay_pass3.exe [run] [applyEndpointGain = false]\n\n";
exit(0);
}
cout.setf(ios::fixed, ios::floatfield);
cout.precision(12);
int runNumber = atoi(argv[1]);
bool applyEndpointGain = false;
if ( argc==3 && ( TString(argv[2])==TString("true") || atoi(argv[2])==1 ) ) applyEndpointGain = true;
int nPMT = 8;
int nParams = 3; //takes a quadratic
// Run number integer
cout << "Run " << runNumber << " ..." << endl;
char tempOut[500];
sprintf(tempOut, "%s/replay_pass3_%s.root",getenv("REPLAY_PASS3"), argv[1]);
//sprintf(tempOut, "replay_pass3_%s.root", argv[1]);
//Check if the file is good already and quit if it is so that we can
// only replay the files that are bad...
if ( OnlyReplayBadFiles ) {
if ( checkIfReplayFileIsGood(std::string(tempOut)) == 1 ) return 1;
else {
std::ofstream badRuns("badRuns.txt", std::fstream::app);
badRuns << argv[1] << "\n";
badRuns.close();
}
}
// Reading in pedestals file to get cathode pedestals
// Read pedestals file
char tempFilePed[500];
int iRun;
sprintf(tempFilePed, "%s/pedestals_%s.dat", getenv("PEDESTALS"), argv[1]);
std::cout << "... Reading: " << tempFilePed << std::endl;
std::ifstream filePed(tempFilePed);
for (int i=0; i<8; i++) {
filePed >> iRun >> pedQadc[i];
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPdc2[i];
}
for (int i=0; i<32; i++) {
filePed >> iRun >> pedPadc[i];
}
filePed >> iRun >> pedPdc30;
filePed >> iRun >> pedPdc34;
cout << "... Applying Calibration ..." << endl;
unsigned int calibrationPeriod = getSrcRunPeriod(runNumber);
LinearityCurve linearityCurve(calibrationPeriod,false); //Get the linearity curve
EreconParameterization eRecon(runNumber); //Load the simulated relationship between EQ and Etrue
WirechamberCal mwpcCal(runNumber); //Load the Wirechamber Calibration
std::vector <Double_t> epGain(8,1.); // Loading the endpoint gain factors if they are to be used
if ( applyEndpointGain ) epGain = loadEndpointGain(runNumber);
std::vector <Int_t> pmtQuality = getEreconPMTQuality(runNumber); //Read in PMT quality file
std::vector <Double_t> alpha = GetAlphaValues(calibrationPeriod); //Get values for nPE/keV...
PositionMap posmap(5.0,50.); //Reading Scintillator position maps
posmap.readPositionMap( getXeRunPeriod(runNumber), "endpoint" );
MWPCPositionMap anodeMap(5., 50.); // Reading Anode position maps
anodeMap.readMWPCPositionMap( getXeRunPeriodForMWPCmap(runNumber) ,250.,300.); // Using 250-300 keV because that's the most probable range
DataTree *t = new DataTree(); // DataTree structure for input pass2 and output pass3
t->makeOutputTree(std::string(tempOut),"pass3"); // Open output ntuple
// Input ntuple
char tempIn[500];
sprintf(tempIn, "%s/replay_pass2_%s.root", getenv("REPLAY_PASS2"),argv[1]);
t->setupInputTree(std::string(tempIn),"pass2");
int nEvents = t->getEntries();
cout << "... Processing nEvents = " << nEvents << endl;
vector < vector <Int_t> > gridPoint;
vector < Double_t > eta;
vector < Double_t > old_eta;
vector < Double_t > gaus_eta;
// Loop over events
for (int i=0; i<nEvents; i++) {
t->getEvent(i);
if ( i%10000==0 ) std::cout << i << std::endl;
// Only process event if it's an electron
if ( t->PID==1 || t->PID==6 ) { //PID==6 includes the APD events as they don't have coincidence on one side...
std::vector <double> posex(3,0.);
std::vector <double> poswx(3,0.);
std::vector <double> posey(3,0.);
std::vector <double> poswy(3,0.);
MWPCCathodeHandler cathResp(t->Cathodes_Ex,t->Cathodes_Ey,t->Cathodes_Wx,t->Cathodes_Wy,&pedPdc2[16],&pedPdc2[0],&pedPadc[16],&pedPadc[0]);
//First do the normal way... weighted average of good events, gaus fit of clipped
cathResp.findAllPositions(true,false);
posex = cathResp.getPosEX();
posey = cathResp.getPosEY();
poswx = cathResp.getPosWX();
poswy = cathResp.getPosWY();
t->xE.center = posex[0] * positionProjection;
t->yE.center = posey[0] * positionProjection;
t->xW.center = poswx[0] * positionProjection;
t->yW.center = poswy[0] * positionProjection;
t->xE.width = posex[1] * positionProjection;
t->yE.width = posey[1] * positionProjection;
t->xW.width = poswx[1] * positionProjection;
t->yW.width = poswy[1] * positionProjection;
t->xE.height = posex[2];
t->yE.height = posey[2];
t->xW.height = poswx[2];
t->yW.height = poswy[2];
t->xE.mult = cathResp.getMultEX();
t->yE.mult = cathResp.getMultEY();
t->xW.mult = cathResp.getMultWX();
t->yW.mult = cathResp.getMultWY();
t->xE.nClipped = cathResp.getnClippedEX();
t->yE.nClipped = cathResp.getnClippedEY();
t->xW.nClipped = cathResp.getnClippedWX();
t->yW.nClipped = cathResp.getnClippedWY();
t->xE.maxWire = cathResp.getMaxWireEX();
t->yE.maxWire = cathResp.getMaxWireEY();
t->xW.maxWire = cathResp.getMaxWireWX();
t->yW.maxWire = cathResp.getMaxWireWY();
t->xE.maxValue = cathResp.getMaxSignalEX();
t->yE.maxValue = cathResp.getMaxSignalEY();
t->xW.maxValue = cathResp.getMaxSignalWX();
t->yW.maxValue = cathResp.getMaxSignalWY();
t->xE.cathSum = cathResp.getCathSumEX();
t->yE.cathSum = cathResp.getCathSumEY();
t->xW.cathSum = cathResp.getCathSumWX();
t->yW.cathSum = cathResp.getCathSumWY();
t->CathSumE = t->xE.cathSum + t->yE.cathSum;
t->CathSumW = t->xW.cathSum + t->yW.cathSum;
t->CathMaxE = t->xE.maxValue + t->yE.maxValue;
t->CathMaxW = t->xW.maxValue + t->yW.maxValue;
t->xE.rawCenter = cathResp.getWirePosEX(t->xE.maxWire);
t->yE.rawCenter = cathResp.getWirePosEY(t->yE.maxWire);
t->xW.rawCenter = cathResp.getWirePosWX(t->xW.maxWire);
t->yW.rawCenter = cathResp.getWirePosWY(t->yW.maxWire);
//Now do all gaussian fits...
//cathResp.loadGainFactors(runNumber);
cathResp.findAllPositions(true,true);
posex = cathResp.getPosEX();
posey = cathResp.getPosEY();
poswx = cathResp.getPosWX();
poswy = cathResp.getPosWY();
t->gaus_xE.center = posex[0] * positionProjection;
t->gaus_yE.center = posey[0] * positionProjection;
t->gaus_xW.center = poswx[0] * positionProjection;
t->gaus_yW.center = poswy[0] * positionProjection;
t->gaus_xE.width = posex[1] * positionProjection;
t->gaus_yE.width = posey[1] * positionProjection;
t->gaus_xW.width = poswx[1] * positionProjection;
t->gaus_yW.width = poswy[1] * positionProjection;
t->gaus_xE.height = posex[2];
t->gaus_yE.height = posey[2];
t->gaus_xW.height = poswx[2];
t->gaus_yW.height = poswy[2];
t->gaus_xE.mult = cathResp.getMultEX();
t->gaus_yE.mult = cathResp.getMultEY();
t->gaus_xW.mult = cathResp.getMultWX();
t->gaus_yW.mult = cathResp.getMultWY();
t->gaus_xE.nClipped = cathResp.getnClippedEX();
t->gaus_yE.nClipped = cathResp.getnClippedEY();
t->gaus_xW.nClipped = cathResp.getnClippedWX();
t->gaus_yW.nClipped = cathResp.getnClippedWY();
t->gaus_xE.maxWire = cathResp.getMaxWireEX();
t->gaus_yE.maxWire = cathResp.getMaxWireEY();
t->gaus_xW.maxWire = cathResp.getMaxWireWX();
t->gaus_yW.maxWire = cathResp.getMaxWireWY();
t->gaus_xE.maxValue = cathResp.getMaxSignalEX();
t->gaus_yE.maxValue = cathResp.getMaxSignalEY();
t->gaus_xW.maxValue = cathResp.getMaxSignalWX();
t->gaus_yW.maxValue = cathResp.getMaxSignalWY();
t->gaus_xE.cathSum = cathResp.getCathSumEX();
t->gaus_yE.cathSum = cathResp.getCathSumEY();
t->gaus_xW.cathSum = cathResp.getCathSumWX();
t->gaus_yW.cathSum = cathResp.getCathSumWY();
t->gaus_xE.rawCenter = cathResp.getWirePosEX(t->xE.maxWire);
t->gaus_yE.rawCenter = cathResp.getWirePosEY(t->yE.maxWire);
t->gaus_xW.rawCenter = cathResp.getWirePosWX(t->xW.maxWire);
t->gaus_yW.rawCenter = cathResp.getWirePosWY(t->yW.maxWire);
// Now for all weighted averages...
cathResp.purgeGainFactors();
cathResp.findAllPositions(false,false);
posex = cathResp.getPosEX();
posey = cathResp.getPosEY();
poswx = cathResp.getPosWX();
poswy = cathResp.getPosWY();
t->old_xE.center = posex[0] * positionProjection;
t->old_yE.center = posey[0] * positionProjection;
t->old_xW.center = poswx[0] * positionProjection;
t->old_yW.center = poswy[0] * positionProjection;
t->old_xE.width = posex[1] * positionProjection;
t->old_yE.width = posey[1] * positionProjection;
t->old_xW.width = poswx[1] * positionProjection;
t->old_yW.width = poswy[1] * positionProjection;
t->old_xE.height = posex[2];
t->old_yE.height = posey[2];
t->old_xW.height = poswx[2];
t->old_yW.height = poswy[2];
t->old_xE.mult = cathResp.getMultEX();
t->old_yE.mult = cathResp.getMultEY();
t->old_xW.mult = cathResp.getMultWX();
t->old_yW.mult = cathResp.getMultWY();
t->old_xE.nClipped = cathResp.getnClippedEX();
t->old_yE.nClipped = cathResp.getnClippedEY();
t->old_xW.nClipped = cathResp.getnClippedWX();
t->old_yW.nClipped = cathResp.getnClippedWY();
t->old_xE.maxWire = cathResp.getMaxWireEX();
t->old_yE.maxWire = cathResp.getMaxWireEY();
t->old_xW.maxWire = cathResp.getMaxWireWX();
t->old_yW.maxWire = cathResp.getMaxWireWY();
t->old_xE.maxValue = cathResp.getMaxSignalEX();
t->old_yE.maxValue = cathResp.getMaxSignalEY();
t->old_xW.maxValue = cathResp.getMaxSignalWX();
t->old_yW.maxValue = cathResp.getMaxSignalWY();
t->old_xE.cathSum = cathResp.getCathSumEX();
t->old_yE.cathSum = cathResp.getCathSumEY();
t->old_xW.cathSum = cathResp.getCathSumWX();
t->old_yW.cathSum = cathResp.getCathSumWY();
t->old_xE.rawCenter = cathResp.getWirePosEX(t->xE.maxWire);
t->old_yE.rawCenter = cathResp.getWirePosEY(t->yE.maxWire);
t->old_xW.rawCenter = cathResp.getWirePosWX(t->xW.maxWire);
t->old_yW.rawCenter = cathResp.getWirePosWY(t->yW.maxWire);
/////////////////////////////////////////////////////////////
/////// Now do the energy reconstruction
/*std::cout << "Event " << i << std::endl;
std::cout << "Optimal: " << t->xE.center << "\t" << t->yE.center << "\t" << t->xW.center << "\t" << t->yW.center << "\n"
<< "Old: " << t->old_xE.center << "\t" << t->old_yE.center << "\t" << t->old_xW.center << "\t" << t->old_yW.center << "\n"
<< "Gaus: " << t->gaus_xE.center << "\t" << t->gaus_yE.center << "\t" << t->gaus_xW.center << "\t" << t->gaus_yW.center << "\n\n" ;*/
eta = posmap.getInterpolatedEta(t->xE.center, t->yE.center, t->xW.center, t->yW.center);
old_eta = posmap.getInterpolatedEta(t->old_xE.center, t->old_yE.center, t->old_xW.center, t->old_yW.center);
gaus_eta = posmap.getInterpolatedEta(t->gaus_xE.center, t->gaus_yE.center, t->gaus_xW.center, t->gaus_yW.center);
//First calculate old position reconstruction old_Erecon
t->ScintE.e1 = linearityCurve.applyLinCurve(0,t->ScintE.q1) * epGain[0];
t->ScintE.e2 = linearityCurve.applyLinCurve(1,t->ScintE.q2) * epGain[1];
t->ScintE.e3 = linearityCurve.applyLinCurve(2,t->ScintE.q3) * epGain[2];
t->ScintE.e4 = linearityCurve.applyLinCurve(3,t->ScintE.q4) * epGain[3];
t->ScintE.e1 = ( old_eta[0]>0. && t->ScintE.e1>0. ) ? t->ScintE.e1 / old_eta[0] : 0.;
t->ScintE.e2 = ( old_eta[1]>0. && t->ScintE.e2>0. ) ? t->ScintE.e2 / old_eta[1] : 0.;
t->ScintE.e3 = ( old_eta[2]>0. && t->ScintE.e3>0. ) ? t->ScintE.e3 / old_eta[2] : 0.;
t->ScintE.e4 = ( old_eta[3]>0. && t->ScintE.e4>0. ) ? t->ScintE.e4 / old_eta[3] : 0.;
t->ScintE.nPE1 = old_eta[0] > 0. ? t->ScintE.e1 * old_eta[0] * alpha[0] : 0.;
t->ScintE.nPE2 = old_eta[1] > 0. ? t->ScintE.e2 * old_eta[1] * alpha[1] : 0.;
t->ScintE.nPE3 = old_eta[2] > 0. ? t->ScintE.e3 * old_eta[2] * alpha[2] : 0.;
t->ScintE.nPE4 = old_eta[3] > 0. ? t->ScintE.e4 * old_eta[3] * alpha[3] : 0.;
t->ScintE.de1 = t->ScintE.nPE1 > 0. ? t->ScintE.e1/sqrt(t->ScintE.nPE1) : 0.;
t->ScintE.de2 = t->ScintE.nPE2 > 0. ? t->ScintE.e2/sqrt(t->ScintE.nPE2) : 0.;
t->ScintE.de3 = t->ScintE.nPE3 > 0. ? t->ScintE.e3/sqrt(t->ScintE.nPE3) : 0.;
t->ScintE.de4 = t->ScintE.nPE4 > 0. ? t->ScintE.e4/sqrt(t->ScintE.nPE4) : 0.;
t->ScintW.e1 = linearityCurve.applyLinCurve(4,t->ScintW.q1) * epGain[4];
t->ScintW.e2 = linearityCurve.applyLinCurve(5,t->ScintW.q2) * epGain[5];
t->ScintW.e3 = linearityCurve.applyLinCurve(6,t->ScintW.q3) * epGain[6];
t->ScintW.e4 = linearityCurve.applyLinCurve(7,t->ScintW.q4) * epGain[7];
t->ScintW.e1 = ( old_eta[4]>0. && t->ScintW.e1>0. ) ? t->ScintW.e1 / old_eta[4] : 0.;
t->ScintW.e2 = ( old_eta[5]>0. && t->ScintW.e2>0. ) ? t->ScintW.e2 / old_eta[5] : 0.;
t->ScintW.e3 = ( old_eta[6]>0. && t->ScintW.e3>0. ) ? t->ScintW.e3 / old_eta[6] : 0.;
t->ScintW.e4 = ( old_eta[7]>0. && t->ScintW.e4>0. ) ? t->ScintW.e4 / old_eta[7] : 0.;
t->ScintW.nPE1 = old_eta[4] > 0. ? t->ScintW.e1 * old_eta[4] * alpha[4] : 0.;
t->ScintW.nPE2 = old_eta[5] > 0. ? t->ScintW.e2 * old_eta[5] * alpha[5] : 0.;
t->ScintW.nPE3 = old_eta[6] > 0. ? t->ScintW.e3 * old_eta[6] * alpha[6] : 0.;
t->ScintW.nPE4 = old_eta[7] > 0. ? t->ScintW.e4 * old_eta[7] * alpha[7] : 0.;
t->ScintW.de1 = t->ScintW.nPE1 > 0. ? t->ScintW.e1/sqrt(t->ScintW.nPE1) : 0.;
t->ScintW.de2 = t->ScintW.nPE2 > 0. ? t->ScintW.e2/sqrt(t->ScintW.nPE2) : 0.;
t->ScintW.de3 = t->ScintW.nPE3 > 0. ? t->ScintW.e3/sqrt(t->ScintW.nPE3) : 0.;
t->ScintW.de4 = t->ScintW.nPE4 > 0. ? t->ScintW.e4/sqrt(t->ScintW.nPE4) : 0.;
//std::cout << "Made it here" << std::endl;
//Calculate the weighted energy on a side
//EAST
Double_t numer = ( (pmtQuality[0] && t->ScintE.nPE1>0. ? t->ScintE.nPE1 : 0.) +
(pmtQuality[1] && t->ScintE.nPE1>0. ? t->ScintE.nPE2 : 0.) +
(pmtQuality[2] && t->ScintE.nPE1>0. ? t->ScintE.nPE3 : 0.) +
(pmtQuality[3] && t->ScintE.nPE1>0. ? t->ScintE.nPE4 : 0.) );
Double_t denom = ( (pmtQuality[0] && t->ScintE.nPE1>0. ? alpha[0] * old_eta[0] : 0.) +
(pmtQuality[1] && t->ScintE.nPE2>0. ? alpha[1] * old_eta[1] : 0.) +
(pmtQuality[2] && t->ScintE.nPE3>0. ? alpha[2] * old_eta[2] : 0.) +
(pmtQuality[3] && t->ScintE.nPE4>0. ? alpha[3] * old_eta[3] : 0.) );
t->ScintE.energy = t->EvisE = (denom!=0. ? numer/denom : 0.);
t->ScintE.denergy = (denom!=0. ? sqrt(t->ScintE.energy/denom) : 0.);
//WEST
numer = denom = 0.;
numer = ( (pmtQuality[4] && t->ScintW.nPE1>0. ? t->ScintW.nPE1 : 0.) +
(pmtQuality[5] && t->ScintW.nPE1>0. ? t->ScintW.nPE2 : 0.) +
(pmtQuality[6] && t->ScintW.nPE1>0. ? t->ScintW.nPE3 : 0.) +
(pmtQuality[7] && t->ScintW.nPE1>0. ? t->ScintW.nPE4 : 0.) );
denom = ( (pmtQuality[4] && t->ScintW.nPE1>0. ? alpha[4] * old_eta[4] : 0.) +
(pmtQuality[5] && t->ScintW.nPE2>0. ? alpha[5] * old_eta[5] : 0.) +
(pmtQuality[6] && t->ScintW.nPE3>0. ? alpha[6] * old_eta[6] : 0.) +
(pmtQuality[7] && t->ScintW.nPE4>0. ? alpha[7] * old_eta[7] : 0.) );
t->ScintW.energy = t->EvisW = (denom!=0. ? numer/denom : 0.);
t->ScintW.denergy = (denom!=0. ? sqrt(t->ScintW.energy/denom) : 0.);
// Determine the reconstructed energy
int typeIndex = t->Type==0 ? 0:(t->Type==1 ? 1:2); //for retrieving the parameters from EQ2Etrue
double totalEvis=0.;
if (t->Side==0) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisE;
if (t->EvisE>0. && totalEvis>0.) {
t->old_Erecon = eRecon.getErecon(0,typeIndex,totalEvis);
}
else t->old_Erecon=-1.;
}
if (t->Side==1) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisW;
if (t->EvisW>0. && totalEvis>0.) {
t->old_Erecon = eRecon.getErecon(1,typeIndex,totalEvis);
}
else t->old_Erecon=-1.;
}
////////////////////////////////////////////////////////////////////
//First calculate old position reconstruction gaus_Erecon
t->ScintE.e1 = linearityCurve.applyLinCurve(0,t->ScintE.q1) * epGain[0];
t->ScintE.e2 = linearityCurve.applyLinCurve(1,t->ScintE.q2) * epGain[1];
t->ScintE.e3 = linearityCurve.applyLinCurve(2,t->ScintE.q3) * epGain[2];
t->ScintE.e4 = linearityCurve.applyLinCurve(3,t->ScintE.q4) * epGain[3];
t->ScintE.e1 = ( gaus_eta[0]>0. && t->ScintE.e1>0. ) ? t->ScintE.e1 / gaus_eta[0] : 0.;
t->ScintE.e2 = ( gaus_eta[1]>0. && t->ScintE.e2>0. ) ? t->ScintE.e2 / gaus_eta[1] : 0.;
t->ScintE.e3 = ( gaus_eta[2]>0. && t->ScintE.e3>0. ) ? t->ScintE.e3 / gaus_eta[2] : 0.;
t->ScintE.e4 = ( gaus_eta[3]>0. && t->ScintE.e4>0. ) ? t->ScintE.e4 / gaus_eta[3] : 0.;
t->ScintE.nPE1 = gaus_eta[0] > 0. ? t->ScintE.e1 * gaus_eta[0] * alpha[0] : 0.;
t->ScintE.nPE2 = gaus_eta[1] > 0. ? t->ScintE.e2 * gaus_eta[1] * alpha[1] : 0.;
t->ScintE.nPE3 = gaus_eta[2] > 0. ? t->ScintE.e3 * gaus_eta[2] * alpha[2] : 0.;
t->ScintE.nPE4 = gaus_eta[3] > 0. ? t->ScintE.e4 * gaus_eta[3] * alpha[3] : 0.;
t->ScintE.de1 = t->ScintE.nPE1 > 0. ? t->ScintE.e1/sqrt(t->ScintE.nPE1) : 0.;
t->ScintE.de2 = t->ScintE.nPE2 > 0. ? t->ScintE.e2/sqrt(t->ScintE.nPE2) : 0.;
t->ScintE.de3 = t->ScintE.nPE3 > 0. ? t->ScintE.e3/sqrt(t->ScintE.nPE3) : 0.;
t->ScintE.de4 = t->ScintE.nPE4 > 0. ? t->ScintE.e4/sqrt(t->ScintE.nPE4) : 0.;
t->ScintW.e1 = linearityCurve.applyLinCurve(4,t->ScintW.q1) * epGain[4];
t->ScintW.e2 = linearityCurve.applyLinCurve(5,t->ScintW.q2) * epGain[5];
t->ScintW.e3 = linearityCurve.applyLinCurve(6,t->ScintW.q3) * epGain[6];
t->ScintW.e4 = linearityCurve.applyLinCurve(7,t->ScintW.q4) * epGain[7];
t->ScintW.e1 = ( gaus_eta[4]>0. && t->ScintW.e1>0. ) ? t->ScintW.e1 / gaus_eta[4] : 0.;
t->ScintW.e2 = ( gaus_eta[5]>0. && t->ScintW.e2>0. ) ? t->ScintW.e2 / gaus_eta[5] : 0.;
t->ScintW.e3 = ( gaus_eta[6]>0. && t->ScintW.e3>0. ) ? t->ScintW.e3 / gaus_eta[6] : 0.;
t->ScintW.e4 = ( gaus_eta[7]>0. && t->ScintW.e4>0. ) ? t->ScintW.e4 / gaus_eta[7] : 0.;
t->ScintW.nPE1 = gaus_eta[4] > 0. ? t->ScintW.e1 * gaus_eta[4] * alpha[4] : 0.;
t->ScintW.nPE2 = gaus_eta[5] > 0. ? t->ScintW.e2 * gaus_eta[5] * alpha[5] : 0.;
t->ScintW.nPE3 = gaus_eta[6] > 0. ? t->ScintW.e3 * gaus_eta[6] * alpha[6] : 0.;
t->ScintW.nPE4 = gaus_eta[7] > 0. ? t->ScintW.e4 * gaus_eta[7] * alpha[7] : 0.;
t->ScintW.de1 = t->ScintW.nPE1 > 0. ? t->ScintW.e1/sqrt(t->ScintW.nPE1) : 0.;
t->ScintW.de2 = t->ScintW.nPE2 > 0. ? t->ScintW.e2/sqrt(t->ScintW.nPE2) : 0.;
t->ScintW.de3 = t->ScintW.nPE3 > 0. ? t->ScintW.e3/sqrt(t->ScintW.nPE3) : 0.;
t->ScintW.de4 = t->ScintW.nPE4 > 0. ? t->ScintW.e4/sqrt(t->ScintW.nPE4) : 0.;
//std::cout << "Made it here" << std::endl;
//Calculate the weighted energy on a side
//EAST
numer = 0.;
numer = ( (pmtQuality[0] && t->ScintE.nPE1>0. ? t->ScintE.nPE1 : 0.) +
(pmtQuality[1] && t->ScintE.nPE2>0. ? t->ScintE.nPE2 : 0.) +
(pmtQuality[2] && t->ScintE.nPE3>0. ? t->ScintE.nPE3 : 0.) +
(pmtQuality[3] && t->ScintE.nPE4>0. ? t->ScintE.nPE4 : 0.) );
denom = 0.;
denom = ( (pmtQuality[0] && t->ScintE.nPE1>0. ? alpha[0] * gaus_eta[0] : 0.) +
(pmtQuality[1] && t->ScintE.nPE2>0. ? alpha[1] * gaus_eta[1] : 0.) +
(pmtQuality[2] && t->ScintE.nPE3>0. ? alpha[2] * gaus_eta[2] : 0.) +
(pmtQuality[3] && t->ScintE.nPE4>0. ? alpha[3] * gaus_eta[3] : 0.) );
t->ScintE.energy = t->EvisE = (denom!=0. ? numer/denom : 0.);
t->ScintE.denergy = (denom!=0. ? sqrt(t->ScintE.energy/denom) : 0.);
//WEST
numer = denom = 0.;
numer = ( (pmtQuality[4] && t->ScintW.nPE1>0. ? t->ScintW.nPE1 : 0.) +
(pmtQuality[5] && t->ScintW.nPE2>0. ? t->ScintW.nPE2 : 0.) +
(pmtQuality[6] && t->ScintW.nPE3>0. ? t->ScintW.nPE3 : 0.) +
(pmtQuality[7] && t->ScintW.nPE4>0. ? t->ScintW.nPE4 : 0.) );
denom = ( (pmtQuality[4] && t->ScintW.nPE1>0. ? alpha[4] * gaus_eta[4] : 0.) +
(pmtQuality[5] && t->ScintW.nPE2>0. ? alpha[5] * gaus_eta[5] : 0.) +
(pmtQuality[6] && t->ScintW.nPE3>0. ? alpha[6] * gaus_eta[6] : 0.) +
(pmtQuality[7] && t->ScintW.nPE4>0. ? alpha[7] * gaus_eta[7] : 0.) );
t->ScintW.energy = t->EvisW = (denom!=0. ? numer/denom : 0.);
t->ScintW.denergy = (denom!=0. ? sqrt(t->ScintW.energy/denom) : 0.);
// Determine the reconstructed energy
typeIndex = t->Type==0 ? 0:(t->Type==1 ? 1:2); //for retrieving the parameters from EQ2Etrue
totalEvis=0.;
if (t->Side==0) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisE;
if (t->EvisE>0. && totalEvis>0.) {
t->gaus_Erecon = eRecon.getErecon(0,typeIndex,totalEvis);
}
else t->gaus_Erecon=-1.;
}
if (t->Side==1) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisW;
if (t->EvisW>0. && totalEvis>0.) {
t->gaus_Erecon = eRecon.getErecon(1,typeIndex,totalEvis);
}
else t->gaus_Erecon=-1.;
}
/////////////////////////////////////////////////////////////
// Now for the real Erecon and all of the variables that will be saved to file
t->ScintE.e1 = linearityCurve.applyLinCurve(0,t->ScintE.q1) * epGain[0];
t->ScintE.e2 = linearityCurve.applyLinCurve(1,t->ScintE.q2) * epGain[1];
t->ScintE.e3 = linearityCurve.applyLinCurve(2,t->ScintE.q3) * epGain[2];
t->ScintE.e4 = linearityCurve.applyLinCurve(3,t->ScintE.q4) * epGain[3];
t->ScintE.e1 = ( eta[0]>0. ) ? t->ScintE.e1 / eta[0] : 0.;
t->ScintE.e2 = ( eta[1]>0. ) ? t->ScintE.e2 / eta[1] : 0.;
t->ScintE.e3 = ( eta[2]>0. ) ? t->ScintE.e3 / eta[2] : 0.;
t->ScintE.e4 = ( eta[3]>0. ) ? t->ScintE.e4 / eta[3] : 0.;
t->ScintE.nPE1 = eta[0] > 0. ? t->ScintE.e1 * eta[0] * alpha[0] : 0.;
t->ScintE.nPE2 = eta[1] > 0. ? t->ScintE.e2 * eta[1] * alpha[1] : 0.;
t->ScintE.nPE3 = eta[2] > 0. ? t->ScintE.e3 * eta[2] * alpha[2] : 0.;
t->ScintE.nPE4 = eta[3] > 0. ? t->ScintE.e4 * eta[3] * alpha[3] : 0.;
t->ScintE.de1 = t->ScintE.nPE1 > 0. ? t->ScintE.e1/sqrt(t->ScintE.nPE1) : 0.;
t->ScintE.de2 = t->ScintE.nPE2 > 0. ? t->ScintE.e2/sqrt(t->ScintE.nPE2) : 0.;
t->ScintE.de3 = t->ScintE.nPE3 > 0. ? t->ScintE.e3/sqrt(t->ScintE.nPE3) : 0.;
t->ScintE.de4 = t->ScintE.nPE4 > 0. ? t->ScintE.e4/sqrt(t->ScintE.nPE4) : 0.;
t->ScintW.e1 = linearityCurve.applyLinCurve(4,t->ScintW.q1) * epGain[4];
t->ScintW.e2 = linearityCurve.applyLinCurve(5,t->ScintW.q2) * epGain[5];
t->ScintW.e3 = linearityCurve.applyLinCurve(6,t->ScintW.q3) * epGain[6];
t->ScintW.e4 = linearityCurve.applyLinCurve(7,t->ScintW.q4) * epGain[7];
t->ScintW.e1 = ( eta[4]>0. ) ? t->ScintW.e1 / eta[4] : 0.;
t->ScintW.e2 = ( eta[5]>0. ) ? t->ScintW.e2 / eta[5] : 0.;
t->ScintW.e3 = ( eta[6]>0. ) ? t->ScintW.e3 / eta[6] : 0.;
t->ScintW.e4 = ( eta[7]>0. ) ? t->ScintW.e4 / eta[7] : 0.;
t->ScintW.nPE1 = eta[4] > 0. ? t->ScintW.e1 * eta[4] * alpha[4] : 0.;
t->ScintW.nPE2 = eta[5] > 0. ? t->ScintW.e2 * eta[5] * alpha[5] : 0.;
t->ScintW.nPE3 = eta[6] > 0. ? t->ScintW.e3 * eta[6] * alpha[6] : 0.;
t->ScintW.nPE4 = eta[7] > 0. ? t->ScintW.e4 * eta[7] * alpha[7] : 0.;
t->ScintW.de1 = t->ScintW.nPE1 > 0. ? t->ScintW.e1/sqrt(t->ScintW.nPE1) : 0.;
t->ScintW.de2 = t->ScintW.nPE2 > 0. ? t->ScintW.e2/sqrt(t->ScintW.nPE2) : 0.;
t->ScintW.de3 = t->ScintW.nPE3 > 0. ? t->ScintW.e3/sqrt(t->ScintW.nPE3) : 0.;
t->ScintW.de4 = t->ScintW.nPE4 > 0. ? t->ScintW.e4/sqrt(t->ScintW.nPE4) : 0.;
// Fill bare scintillator branch with no endpoint gain
t->ScintE_bare.q1 = t->ScintE.q1;
t->ScintE_bare.q2 = t->ScintE.q2;
t->ScintE_bare.q3 = t->ScintE.q3;
t->ScintE_bare.q4 = t->ScintE.q4;
t->ScintW_bare.q1 = t->ScintW.q1;
t->ScintW_bare.q2 = t->ScintW.q2;
t->ScintW_bare.q3 = t->ScintW.q3;
t->ScintW_bare.q4 = t->ScintW.q4;
t->ScintE_bare.e1 = linearityCurve.applyLinCurve(0,t->ScintE_bare.q1);
t->ScintE_bare.e2 = linearityCurve.applyLinCurve(1,t->ScintE_bare.q2);
t->ScintE_bare.e3 = linearityCurve.applyLinCurve(2,t->ScintE_bare.q3);
t->ScintE_bare.e4 = linearityCurve.applyLinCurve(3,t->ScintE_bare.q4);
t->ScintE_bare.e1 = ( eta[0]>0. ) ? t->ScintE_bare.e1 / eta[0] : 0.;
t->ScintE_bare.e2 = ( eta[1]>0. ) ? t->ScintE_bare.e2 / eta[1] : 0.;
t->ScintE_bare.e3 = ( eta[2]>0. ) ? t->ScintE_bare.e3 / eta[2] : 0.;
t->ScintE_bare.e4 = ( eta[3]>0. ) ? t->ScintE_bare.e4 / eta[3] : 0.;
t->ScintE_bare.nPE1 = eta[0] > 0. ? t->ScintE_bare.e1 * eta[0] * alpha[0] : 0.;
t->ScintE_bare.nPE2 = eta[1] > 0. ? t->ScintE_bare.e2 * eta[1] * alpha[1] : 0.;
t->ScintE_bare.nPE3 = eta[2] > 0. ? t->ScintE_bare.e3 * eta[2] * alpha[2] : 0.;
t->ScintE_bare.nPE4 = eta[3] > 0. ? t->ScintE_bare.e4 * eta[3] * alpha[3] : 0.;
t->ScintE_bare.de1 = t->ScintE_bare.nPE1 > 0. ? t->ScintE_bare.e1/sqrt(t->ScintE_bare.nPE1) : 0.;
t->ScintE_bare.de2 = t->ScintE_bare.nPE2 > 0. ? t->ScintE_bare.e2/sqrt(t->ScintE_bare.nPE2) : 0.;
t->ScintE_bare.de3 = t->ScintE_bare.nPE3 > 0. ? t->ScintE_bare.e3/sqrt(t->ScintE_bare.nPE3) : 0.;
t->ScintE_bare.de4 = t->ScintE_bare.nPE4 > 0. ? t->ScintE_bare.e4/sqrt(t->ScintE_bare.nPE4) : 0.;
t->ScintW_bare.e1 = linearityCurve.applyLinCurve(4,t->ScintW_bare.q1);
t->ScintW_bare.e2 = linearityCurve.applyLinCurve(5,t->ScintW_bare.q2);
t->ScintW_bare.e3 = linearityCurve.applyLinCurve(6,t->ScintW_bare.q3);
t->ScintW_bare.e4 = linearityCurve.applyLinCurve(7,t->ScintW_bare.q4);
t->ScintW_bare.e1 = ( eta[4]>0. ) ? t->ScintW_bare.e1 / eta[4] : 0.;
t->ScintW_bare.e2 = ( eta[5]>0. ) ? t->ScintW_bare.e2 / eta[5] : 0.;
t->ScintW_bare.e3 = ( eta[6]>0. ) ? t->ScintW_bare.e3 / eta[6] : 0.;
t->ScintW_bare.e4 = ( eta[7]>0. ) ? t->ScintW_bare.e4 / eta[7] : 0.;
t->ScintW_bare.nPE1 = eta[4] > 0. ? t->ScintW_bare.e1 * eta[4] * alpha[4] : 0.;
t->ScintW_bare.nPE2 = eta[5] > 0. ? t->ScintW_bare.e2 * eta[5] * alpha[5] : 0.;
t->ScintW_bare.nPE3 = eta[6] > 0. ? t->ScintW_bare.e3 * eta[6] * alpha[6] : 0.;
t->ScintW_bare.nPE4 = eta[7] > 0. ? t->ScintW_bare.e4 * eta[7] * alpha[7] : 0.;
t->ScintW_bare.de1 = t->ScintW_bare.nPE1 > 0. ? t->ScintW_bare.e1/sqrt(t->ScintW_bare.nPE1) : 0.;
t->ScintW_bare.de2 = t->ScintW_bare.nPE2 > 0. ? t->ScintW_bare.e2/sqrt(t->ScintW_bare.nPE2) : 0.;
t->ScintW_bare.de3 = t->ScintW_bare.nPE3 > 0. ? t->ScintW_bare.e3/sqrt(t->ScintW_bare.nPE3) : 0.;
t->ScintW_bare.de4 = t->ScintW_bare.nPE4 > 0. ? t->ScintW_bare.e4/sqrt(t->ScintW_bare.nPE4) : 0.;
//std::cout << "Made it here" << std::endl;
//Calculate the weighted energy on a side
//EAST
numer = 0.;
numer = ( (pmtQuality[0] ? t->ScintE.nPE1 : 0.) +
(pmtQuality[1] ? t->ScintE.nPE2 : 0.) +
(pmtQuality[2] ? t->ScintE.nPE3 : 0.) +
(pmtQuality[3] ? t->ScintE.nPE4 : 0.) );
denom = 0.;
denom = ( (pmtQuality[0] ? alpha[0] * eta[0] : 0.) +
(pmtQuality[1] ? alpha[1] * eta[1] : 0.) +
(pmtQuality[2] ? alpha[2] * eta[2] : 0.) +
(pmtQuality[3] ? alpha[3] * eta[3] : 0.) );
t->ScintE.energy = t->EvisE = (denom!=0. ? numer/denom : 0.);
t->ScintE.denergy = (denom!=0. ? sqrt(t->ScintE.energy/denom) : 0.);
//WEST
numer = denom = 0.;
numer = ( (pmtQuality[4] ? t->ScintW.nPE1 : 0.) +
(pmtQuality[5] ? t->ScintW.nPE2 : 0.) +
(pmtQuality[6] ? t->ScintW.nPE3 : 0.) +
(pmtQuality[7] ? t->ScintW.nPE4 : 0.) );
denom = ( (pmtQuality[4] ? alpha[4] * eta[4] : 0.) +
(pmtQuality[5] ? alpha[5] * eta[5] : 0.) +
(pmtQuality[6] ? alpha[6] * eta[6] : 0.) +
(pmtQuality[7] ? alpha[7] * eta[7] : 0.) );
t->ScintW.energy = t->EvisW = (denom!=0. ? numer/denom : 0.);
t->ScintW.denergy = (denom!=0. ? sqrt(t->ScintW.energy/denom) : 0.);
// Determine the reconstructed energy
typeIndex = t->Type==0 ? 0:(t->Type==1 ? 1:2); //for retrieving the parameters from EQ2Etrue
totalEvis=0.;
t->Erecon_ee = 0.;
//Handling APD events
if (t->PID==6) {
if (t->PassedCathE && t->PassedCathW) {
typeIndex=2;
t->Type=2;
t->Side = t->EvisE>t->EvisW?0:1;
} else if (t->PassedCathE) {
typeIndex=0;
t->Type=0;
t->Side = 0;
}
else if (t->PassedCathW) {
typeIndex=0;
t->Type=0;
t->Side = 1;
} else t->Side=2; //This won't create an Erecon.
}
if (t->Side==0) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisE;
if (t->EvisE>0. && totalEvis>0.) {
t->Erecon = eRecon.getErecon(0,typeIndex,totalEvis);
}
else t->Erecon=-1.;
}
if (t->Side==1) {
totalEvis = t->Type==1 ? (t->EvisE+t->EvisW):t->EvisW;
if (t->EvisW>0. && totalEvis>0.) {
t->Erecon = eRecon.getErecon(1,typeIndex,totalEvis);
}
else t->Erecon=-1.;
}
if (t->Type==1 && t->EvisW>0. && t->EvisE>0.) {
t->Erecon_ee = eRecon.getErecon(0,0,t->EvisE) + eRecon.getErecon(1,0,t->EvisW);
}
}
else if (t->PID==0) {
eta = posmap.getInterpolatedEta(0., 0., 0., 0.);
//eta = posmap.getInterpolatedEta(xEast[0], yEast[0], xWest[0], yWest[0]);
t->ScintE.e1 = linearityCurve.applyLinCurve(0,t->ScintE.q1);
t->ScintE.e2 = linearityCurve.applyLinCurve(1,t->ScintE.q2);
t->ScintE.e3 = linearityCurve.applyLinCurve(2,t->ScintE.q3);
t->ScintE.e4 = linearityCurve.applyLinCurve(3,t->ScintE.q4);
t->ScintE.e1 = ( eta[0]>0. ) ? t->ScintE.e1 / eta[0] : 0.;
t->ScintE.e2 = ( eta[1]>0. ) ? t->ScintE.e2 / eta[1] : 0.;
t->ScintE.e3 = ( eta[2]>0. ) ? t->ScintE.e3 / eta[2] : 0.;
t->ScintE.e4 = ( eta[3]>0. ) ? t->ScintE.e4 / eta[3] : 0.;
t->ScintE.nPE1 = eta[0] > 0. ? t->ScintE.e1 * eta[0] * alpha[0] : 0.;
t->ScintE.nPE2 = eta[1] > 0. ? t->ScintE.e2 * eta[1] * alpha[1] : 0.;
t->ScintE.nPE3 = eta[2] > 0. ? t->ScintE.e3 * eta[2] * alpha[2] : 0.;
t->ScintE.nPE4 = eta[3] > 0. ? t->ScintE.e4 * eta[3] * alpha[3] : 0.;
t->ScintE.de1 = t->ScintE.nPE1 > 0. ? t->ScintE.e1/sqrt(t->ScintE.nPE1) : 0.;
t->ScintE.de2 = t->ScintE.nPE2 > 0. ? t->ScintE.e2/sqrt(t->ScintE.nPE2) : 0.;
t->ScintE.de3 = t->ScintE.nPE3 > 0. ? t->ScintE.e3/sqrt(t->ScintE.nPE3) : 0.;
t->ScintE.de4 = t->ScintE.nPE4 > 0. ? t->ScintE.e4/sqrt(t->ScintE.nPE4) : 0.;
t->ScintW.e1 = linearityCurve.applyLinCurve(4,t->ScintW.q1);
t->ScintW.e2 = linearityCurve.applyLinCurve(5,t->ScintW.q2);
t->ScintW.e3 = linearityCurve.applyLinCurve(6,t->ScintW.q3);
t->ScintW.e4 = linearityCurve.applyLinCurve(7,t->ScintW.q4);
t->ScintW.e1 = ( eta[4]>0. ) ? t->ScintW.e1 / eta[4] : 0.;
t->ScintW.e2 = ( eta[5]>0. ) ? t->ScintW.e2 / eta[5] : 0.;
t->ScintW.e3 = ( eta[6]>0. ) ? t->ScintW.e3 / eta[6] : 0.;
t->ScintW.e4 = ( eta[7]>0. ) ? t->ScintW.e4 / eta[7] : 0.;
t->ScintW.nPE1 = eta[4] > 0. ? t->ScintW.e1 * eta[4] * alpha[4] : 0.;
t->ScintW.nPE2 = eta[5] > 0. ? t->ScintW.e2 * eta[5] * alpha[5] : 0.;
t->ScintW.nPE3 = eta[6] > 0. ? t->ScintW.e3 * eta[6] * alpha[6] : 0.;
t->ScintW.nPE4 = eta[7] > 0. ? t->ScintW.e4 * eta[7] * alpha[7] : 0.;
t->ScintW.de1 = t->ScintW.nPE1 > 0. ? t->ScintW.e1/sqrt(t->ScintW.nPE1) : 0.;
t->ScintW.de2 = t->ScintW.nPE2 > 0. ? t->ScintW.e2/sqrt(t->ScintW.nPE2) : 0.;
t->ScintW.de3 = t->ScintW.nPE3 > 0. ? t->ScintW.e3/sqrt(t->ScintW.nPE3) : 0.;
t->ScintW.de4 = t->ScintW.nPE4 > 0. ? t->ScintW.e4/sqrt(t->ScintW.nPE4) : 0.;
//std::cout << "Made it here" << std::endl;
//Calculate the weighted energy on a side
//EAST
double numer = 0.;
numer = ( (pmtQuality[0] ? t->ScintE.nPE1 : 0.) +
(pmtQuality[1] ? t->ScintE.nPE2 : 0.) +
(pmtQuality[2] ? t->ScintE.nPE3 : 0.) +
(pmtQuality[3] ? t->ScintE.nPE4 : 0.) );
double denom = 0.;
denom = ( (pmtQuality[0] ? alpha[0] * eta[0] : 0.) +
(pmtQuality[1] ? alpha[1] * eta[1] : 0.) +
(pmtQuality[2] ? alpha[2] * eta[2] : 0.) +
(pmtQuality[3] ? alpha[3] * eta[3] : 0.) );
t->ScintE.energy = t->EvisE = (denom!=0. ? numer/denom : 0.);
t->ScintE.denergy = (denom!=0. ? sqrt(t->ScintE.energy/denom) : 0.);
//WEST
numer = denom = 0.;
numer = ( (pmtQuality[4] ? t->ScintW.nPE1 : 0.) +
(pmtQuality[5] ? t->ScintW.nPE2 : 0.) +
(pmtQuality[6] ? t->ScintW.nPE3 : 0.) +
(pmtQuality[7] ? t->ScintW.nPE4 : 0.) );
denom = ( (pmtQuality[4] ? alpha[4] * eta[4] : 0.) +
(pmtQuality[5] ? alpha[5] * eta[5] : 0.) +
(pmtQuality[6] ? alpha[6] * eta[6] : 0.) +
(pmtQuality[7] ? alpha[7] * eta[7] : 0.) );
t->ScintW.energy = t->EvisW = (denom!=0. ? numer/denom : 0.);
t->ScintW.denergy = (denom!=0. ? sqrt(t->ScintW.energy/denom) : 0.);
// Determine the reconstructed energy
Int_t typeIndex = 0; //for retrieving the parameters from EQ2Etrue
if (t->Side==0) {
if (t->EvisE>0.) {
t->Erecon = eRecon.getErecon(0,typeIndex,t->EvisE);
}
else t->Erecon=-1.;
}
if (t->Side==1) {
if (t->EvisW>0.) {
t->Erecon = eRecon.getErecon(1,typeIndex,t->EvisW);
}
else t->Erecon=-1.;
}
}
// Last thing to do for electrons is position correct the anode signal and
// apply the wirechamber energy calibration
// Get the position response
std::vector <Double_t> etaMWPC = anodeMap.getInterpolatedEta(t->xE.center,t->yE.center,
t->xW.center,t->yW.center);
t->AnodeE = t->AnodeE / etaMWPC[0];
t->AnodeW = t->AnodeW / etaMWPC[1];
t->EMWPC_E = mwpcCal.applyCal( 0, t->AnodeE ) ;
t->EMWPC_W = mwpcCal.applyCal( 1, t->AnodeW ) ;
// write out pedestal subtracted cathode values for all events
for ( int ii = 0; ii<16; ++ii ) {
t->Cathodes_Ex[ii] = t->Cathodes_Ex[ii] - pedPdc2[ii+16];
t->Cathodes_Ey[ii] = t->Cathodes_Ey[ii] - pedPdc2[ii];
t->Cathodes_Wx[ii] = t->Cathodes_Wx[ii] - pedPadc[ii+16];
t->Cathodes_Wy[ii] = t->Cathodes_Wy[ii] - pedPadc[ii];
}
t->fillOutputTree();
}
// Write output ntuple
t->writeOutputFile();
delete t; //Closes files
if ( checkIfReplayFileIsGood(std::string(tempOut)) != 1 ) {
std::ofstream badRuns("badRuns.txt", std::fstream::app);
badRuns << argv[1] << "\n";
badRuns.close();
}
return 0;
}
int main(int argc, char *argv[])
{
cout.setf(ios::fixed, ios::floatfield);
cout.precision(12);
cout << "Run " << argv[1] << " ..." << endl;
cout << "... Applying Bi pulser gain corrections ..." << endl;
// Read gain corrections file
char tempFileGain[500];
sprintf(tempFileGain, "%s/gain_bismuth_%s.dat",getenv("GAIN_BISMUTH"), argv[1]);
cout << "... Reading: " << tempFileGain << endl;
double fitMean[8], gainCorrection[8];
ifstream fileGain(tempFileGain);
for (int i=0; i<8; i++) {
fileGain >> fitMean[i] >> gainCorrection[i];
}
cout << "... PMT E1: " << gainCorrection[0] << endl;
cout << "... PMT E2: " << gainCorrection[1] << endl;
cout << "... PMT E3: " << gainCorrection[2] << endl;
cout << "... PMT E4: " << gainCorrection[3] << endl;
cout << "... PMT W1: " << gainCorrection[4] << endl;
cout << "... PMT W2: " << gainCorrection[5] << endl;
cout << "... PMT W3: " << gainCorrection[6] << endl;
cout << "... PMT W4: " << gainCorrection[7] << endl;
// Open output ntuple
char tempOut[500];
sprintf(tempOut, "%s/replay_pass2_%s.root",getenv("REPLAY_PASS2"), argv[1]);
//sprintf(tempOut, "replay_pass2_%s.root", argv[1]);
DataTree *t = new DataTree();
t->makeOutputTree(std::string(tempOut),"pass2");
char tempIn[500];
sprintf(tempIn, "%s/replay_pass1_%s.root", getenv("REPLAY_PASS1"),argv[1]);
//sprintf(tempIn, "../replay_pass1/replay_pass1_%s.root", argv[1]);
t->setupInputTree(std::string(tempIn),"pass1");
int nEvents = t->getEntries();
cout << "... Processing nEvents = " << nEvents << endl;
// Loop over events
for (Int_t i=0; i<nEvents; i++) {
t->getEvent(i);
// Apply gain correction factors
t->ScintE.q1 = t->ScintE.q1*gainCorrection[0];
t->ScintE.q2 = t->ScintE.q2*gainCorrection[1];
t->ScintE.q3 = t->ScintE.q3*gainCorrection[2];
t->ScintE.q4 = t->ScintE.q4*gainCorrection[3];
t->ScintW.q1 = t->ScintW.q1*gainCorrection[4];
t->ScintW.q2 = t->ScintW.q2*gainCorrection[5];
t->ScintW.q3 = t->ScintW.q3*gainCorrection[6];
t->ScintW.q4 = t->ScintW.q4*gainCorrection[7];
t->fillOutputTree();
}
// Write output ntuple
t->writeOutputFile();
delete t;
return 0;
}