コード例 #1
0
ファイル: Local.hpp プロジェクト: AmiArnab/Elemental
void EnsureConformal
( const DistMatrix<T,MR,STAR>& A, const DistMatrix<T>& C, string name )
{
    if( A.Height() != C.Width() || A.ColAlign() != C.RowAlign() )
        LogicError(name," not conformal with C");
}
コード例 #2
0
ファイル: Hessenberg.cpp プロジェクト: mcopik/Elemental
void TestCorrectness
( UpperOrLower uplo, 
  const DistMatrix<F>& A, 
  const DistMatrix<F,STAR,STAR>& t,
        DistMatrix<F>& AOrig,
  bool print, bool display )
{
    typedef Base<F> Real;
    const Grid& g = A.Grid();
    const Int n = AOrig.Height();
    const Real infNormAOrig = InfinityNorm( AOrig );
    const Real frobNormAOrig = FrobeniusNorm( AOrig );
    if( g.Rank() == 0 )
        Output("Testing error...");

    // Set H to the appropriate Hessenberg portion of A
    DistMatrix<F> H( A );
    if( uplo == LOWER )
        MakeTrapezoidal( LOWER, H, 1 );
    else
        MakeTrapezoidal( UPPER, H, -1 );
    if( print )
        Print( H, "Hessenberg" );
    if( display )
        Display( H, "Bidiagonal" );

    if( print || display )
    {
        DistMatrix<F> Q(g);
        Identity( Q, n, n );
        hessenberg::ApplyQ( LEFT, uplo, NORMAL, A, t, Q );
        if( print )
            Print( Q, "Q" );
        if( display )
            Display( Q, "Q" );
    }

    // Reverse the accumulated Householder transforms
    hessenberg::ApplyQ( LEFT, uplo, ADJOINT, A, t, AOrig );
    hessenberg::ApplyQ( RIGHT, uplo, NORMAL, A, t, AOrig );
    if( print )
        Print( AOrig, "Manual Hessenberg" );
    if( display )
        Display( AOrig, "Manual Hessenberg" );

    // Compare the appropriate portion of AOrig and B
    if( uplo == LOWER )
        MakeTrapezoidal( LOWER, AOrig, 1 );
    else
        MakeTrapezoidal( UPPER, AOrig, -1 );
    H -= AOrig;
    if( print )
        Print( H, "Error in rotated Hessenberg" );
    if( display )
        Display( H, "Error in rotated Hessenberg" );
    const Real infNormError = InfinityNorm( H );
    const Real frobNormError = FrobeniusNorm( H );

    if( g.Rank() == 0 )
        Output
        ("    ||A||_oo = ",infNormAOrig,"\n",
         "    ||A||_F  = ",frobNormAOrig,"\n",
         "    ||H - Q^H A Q||_oo = ",infNormError,"\n",
         "    ||H - Q^H A Q||_F  = ",frobNormError);
}
コード例 #3
0
ファイル: LUN.hpp プロジェクト: jimgoo/Elemental
inline void
TrsmLUNSmall
( UnitOrNonUnit diag,
  F alpha, const DistMatrix<F,VC,STAR>& U, DistMatrix<F,VC,STAR>& X,
  bool checkIfSingular )
{
#ifndef RELEASE
    PushCallStack("internal::TrsmLUNSmall");
    if( U.Grid() != X.Grid() )
        throw std::logic_error
        ("U and X must be distributed over the same grid");
    if( U.Height() != U.Width() || U.Width() != X.Height() )
    {
        std::ostringstream msg;
        msg << "Nonconformal TrsmLUN: \n"
            << "  U ~ " << U.Height() << " x " << U.Width() << "\n"
            << "  X ~ " << X.Height() << " x " << X.Width() << "\n";
        throw std::logic_error( msg.str() );
    }
    if( U.ColAlignment() != X.ColAlignment() )
        throw std::logic_error("U and X are assumed to be aligned");
#endif
    const Grid& g = U.Grid();

    // Matrix views
    DistMatrix<F,VC,STAR> 
        UTL(g), UTR(g),  U00(g), U01(g), U02(g),
        UBL(g), UBR(g),  U10(g), U11(g), U12(g),
                         U20(g), U21(g), U22(g);
    DistMatrix<F,VC,STAR> XT(g),  X0(g),
                          XB(g),  X1(g),
                                  X2(g);

    // Temporary distributions
    DistMatrix<F,STAR,STAR> U11_STAR_STAR(g);
    DistMatrix<F,STAR,STAR> X1_STAR_STAR(g);

    // Start the algorithm
    Scale( alpha, X );
    LockedPartitionUpDiagonal
    ( U, UTL, UTR,
         UBL, UBR, 0 );
    PartitionUp
    ( X, XT,
         XB, 0 );
    while( XT.Height() > 0 )
    {
        LockedRepartitionUpDiagonal
        ( UTL, /**/ UTR,   U00, U01, /**/ U02,
               /**/        U10, U11, /**/ U12,
         /*************/  /******************/
          UBL, /**/ UBR,   U20, U21, /**/ U22 );

        RepartitionUp
        ( XT,  X0,
               X1,
         /**/ /**/
          XB,  X2 );

        //--------------------------------------------------------------------//
        U11_STAR_STAR = U11; // U11[* ,* ] <- U11[VC,* ]
        X1_STAR_STAR = X1;   // X1[* ,* ] <- X1[VC,* ]
        
        // X1[* ,* ] := U11^-1[* ,* ] X1[* ,* ]
        LocalTrsm
        ( LEFT, UPPER, NORMAL, diag,
          F(1), U11_STAR_STAR, X1_STAR_STAR, checkIfSingular );
        X1 = X1_STAR_STAR;

        // X0[VC,* ] -= U01[VC,* ] X1[* ,* ]
        LocalGemm( NORMAL, NORMAL, F(-1), U01, X1_STAR_STAR, F(1), X0 );
        //--------------------------------------------------------------------//

        SlideLockedPartitionUpDiagonal
        ( UTL, /**/ UTR,  U00, /**/ U01, U02,
         /*************/ /******************/
               /**/       U10, /**/ U11, U12,
          UBL, /**/ UBR,  U20, /**/ U21, U22 );

        SlidePartitionUp
        ( XT,  X0,
         /**/ /**/
               X1,
          XB,  X2 );
    }
#ifndef RELEASE
    PopCallStack();
#endif
}
コード例 #4
0
ファイル: UVar5.hpp プロジェクト: certik/Elemental
inline void
TwoSidedTrsmUVar5
( UnitOrNonUnit diag, DistMatrix<F>& A, const DistMatrix<F>& U )
{
#ifndef RELEASE
    PushCallStack("internal::TwoSidedTrsmUVar5");
    if( A.Height() != A.Width() )
        throw std::logic_error("A must be square");
    if( U.Height() != U.Width() )
        throw std::logic_error("Triangular matrices must be square");
    if( A.Height() != U.Height() )
        throw std::logic_error("A and U must be the same size");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F>
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);
    DistMatrix<F>
        UTL(g), UTR(g),  U00(g), U01(g), U02(g),
        UBL(g), UBR(g),  U10(g), U11(g), U12(g),
                         U20(g), U21(g), U22(g);

    // Temporary distributions
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,STAR,MC  > A12_STAR_MC(g);
    DistMatrix<F,STAR,MR  > A12_STAR_MR(g);
    DistMatrix<F,STAR,VC  > A12_STAR_VC(g);
    DistMatrix<F,STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,STAR,STAR> U11_STAR_STAR(g);
    DistMatrix<F,STAR,MC  > U12_STAR_MC(g);
    DistMatrix<F,STAR,MR  > U12_STAR_MR(g);
    DistMatrix<F,STAR,VC  > U12_STAR_VC(g);
    DistMatrix<F,STAR,VR  > U12_STAR_VR(g);
    DistMatrix<F,STAR,VR  > Y12_STAR_VR(g);
    DistMatrix<F> Y12(g);

    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    LockedPartitionDownDiagonal
    ( U, UTL, UTR,
         UBL, UBR, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        LockedRepartitionDownDiagonal
        ( UTL, /**/ UTR,  U00, /**/ U01, U02,
         /*************/ /******************/
               /**/       U10, /**/ U11, U12,
          UBL, /**/ UBR,  U20, /**/ U21, U22 );

        A12_STAR_MC.AlignWith( A22 );
        A12_STAR_MR.AlignWith( A22 );
        A12_STAR_VC.AlignWith( A22 );
        A12_STAR_VR.AlignWith( A22 );
        U12_STAR_MC.AlignWith( A22 );
        U12_STAR_MR.AlignWith( A22 );
        U12_STAR_VC.AlignWith( A22 );
        U12_STAR_VR.AlignWith( A22 );
        Y12.AlignWith( A12 );
        Y12_STAR_VR.AlignWith( A12 );
        //--------------------------------------------------------------------//
        // A11 := inv(U11)' A11 inv(U11)
        U11_STAR_STAR = U11;
        A11_STAR_STAR = A11;
        LocalTwoSidedTrsm( UPPER, diag, A11_STAR_STAR, U11_STAR_STAR );
        A11 = A11_STAR_STAR;

        // Y12 := A11 U12
        U12_STAR_VR = U12;
        Y12_STAR_VR.ResizeTo( A12.Height(), A12.Width() );
        Hemm
        ( LEFT, UPPER,
          F(1), A11_STAR_STAR.LocalMatrix(), U12_STAR_VR.LocalMatrix(),
          F(0), Y12_STAR_VR.LocalMatrix() );
        Y12 = Y12_STAR_VR;

        // A12 := inv(U11)' A12
        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, UPPER, ADJOINT, diag, F(1), U11_STAR_STAR, A12_STAR_VR );
        A12 = A12_STAR_VR;

        // A12 := A12 - 1/2 Y12
        Axpy( F(-1)/F(2), Y12, A12 );

        // A22 := A22 - (A12' U12 + U12' A12)
        A12_STAR_VR = A12;
        A12_STAR_VC = A12_STAR_VR;
        U12_STAR_VC = U12_STAR_VR;
        A12_STAR_MC = A12_STAR_VC;
        U12_STAR_MC = U12_STAR_VC;
        A12_STAR_MR = A12_STAR_VR;
        U12_STAR_MR = U12_STAR_VR;
        LocalTrr2k
        ( UPPER, ADJOINT, ADJOINT,
          F(-1), U12_STAR_MC, A12_STAR_MR,
                 A12_STAR_MC, U12_STAR_MR,
          F(1), A22 );

        // A12 := A12 - 1/2 Y12
        Axpy( F(-1)/F(2), Y12, A12 );

        // A12 := A12 inv(U22)
        //
        // This is the bottleneck because A12 only has blocksize rows
        Trsm( RIGHT, UPPER, NORMAL, diag, F(1), U22, A12 );
        //--------------------------------------------------------------------//
        A12_STAR_MC.FreeAlignments();
        A12_STAR_MR.FreeAlignments();
        A12_STAR_VC.FreeAlignments();
        A12_STAR_VR.FreeAlignments();
        U12_STAR_MC.FreeAlignments();
        U12_STAR_MR.FreeAlignments();
        U12_STAR_VC.FreeAlignments();
        U12_STAR_VR.FreeAlignments();
        Y12.FreeAlignments();
        Y12_STAR_VR.FreeAlignments();

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );

        SlideLockedPartitionDownDiagonal
        ( UTL, /**/ UTR,  U00, U01, /**/ U02,
               /**/       U10, U11, /**/ U12,
         /*************/ /******************/
          UBL, /**/ UBR,  U20, U21, /**/ U22 );
    }
#ifndef RELEASE
    PopCallStack();
#endif
}
コード例 #5
0
ファイル: LSquare.hpp プロジェクト: ahmadia/Elemental-1
void LSquare( DistMatrix<R>& A )
{
#ifndef RELEASE
    CallStackEntry entry("hermitian_tridiag::LSquare");
    if( A.Height() != A.Width() )
        throw std::logic_error("A must be square");
    if( A.Grid().Height() != A.Grid().Width() )
        throw std::logic_error("The process grid must be square");
#endif
    const Grid& g = A.Grid();

    // Matrix views 
    DistMatrix<R> 
        ATL(g), ATR(g),  A00(g), A01(g), A02(g), 
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);

    // Temporary distributions
    DistMatrix<R> WPan(g);
    DistMatrix<R,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<R,MC,  STAR> APan_MC_STAR(g),  A11_MC_STAR(g),
                                              A21_MC_STAR(g);
    DistMatrix<R,MR,  STAR> APan_MR_STAR(g),  A11_MR_STAR(g),
                                              A21_MR_STAR(g);
    DistMatrix<R,MC,  STAR> WPan_MC_STAR(g),  W11_MC_STAR(g),
                                              W21_MC_STAR(g);
    DistMatrix<R,MR,  STAR> WPan_MR_STAR(g),  W11_MR_STAR(g),
                                              W21_MR_STAR(g);

    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        if( A22.Height() > 0 )
        {
            WPan.AlignWith( A11 );
            APan_MC_STAR.AlignWith( A11 );
            WPan_MC_STAR.AlignWith( A11 );
            APan_MR_STAR.AlignWith( A11 );
            WPan_MR_STAR.AlignWith( A11 );
            //----------------------------------------------------------------//
            WPan.ResizeTo( ABR.Height(), A11.Width() );
            APan_MC_STAR.ResizeTo( ABR.Height(), A11.Width() );
            WPan_MC_STAR.ResizeTo( ABR.Height(), A11.Width() );
            APan_MR_STAR.ResizeTo( ABR.Height(), A11.Width() );
            WPan_MR_STAR.ResizeTo( ABR.Height(), A11.Width() );

            hermitian_tridiag::PanelLSquare
            ( ABR, WPan, 
              APan_MC_STAR, APan_MR_STAR, WPan_MC_STAR, WPan_MR_STAR );

            PartitionDown
            ( APan_MC_STAR, A11_MC_STAR,
                            A21_MC_STAR, A11.Height() );
            PartitionDown
            ( APan_MR_STAR, A11_MR_STAR,
                            A21_MR_STAR, A11.Height() );
            PartitionDown
            ( WPan_MC_STAR, W11_MC_STAR,
                            W21_MC_STAR, A11.Height() );
            PartitionDown
            ( WPan_MR_STAR, W11_MR_STAR,
                            W21_MR_STAR, A11.Height() );

            LocalTrr2k
            ( LOWER, TRANSPOSE, TRANSPOSE,
              R(-1), A21_MC_STAR, W21_MR_STAR,
                     W21_MC_STAR, A21_MR_STAR,
              R(1), A22 );
            //----------------------------------------------------------------//
            WPan_MR_STAR.FreeAlignments();
            APan_MR_STAR.FreeAlignments();
            WPan_MC_STAR.FreeAlignments();
            APan_MC_STAR.FreeAlignments();
            WPan.FreeAlignments();
        }
        else
        {
            A11_STAR_STAR = A11;
            HermitianTridiag( LOWER, A11_STAR_STAR.Matrix() );
            A11 = A11_STAR_STAR;
        }

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );
    }
}
コード例 #6
0
void TestCorrectness
( LeftOrRight side, UpperOrLower uplo, ForwardOrBackward order,
  Conjugation conjugation, Int offset, bool printMatrices,
  const DistMatrix<F>& H,
  const DistMatrix<F,MD,STAR>& t )
{
    typedef Base<F> Real;
    const Grid& g = H.Grid();
    const Int m = H.Height();

    if( g.Rank() == 0 )
        cout << "  Testing orthogonality of transform..." << endl;

    // Form Z := Q^H Q or Q Q^H as an approximation to identity
    DistMatrix<F> Y(g);
    Identity( Y, m, m );
    ApplyPackedReflectors
    ( side, uplo, VERTICAL, order, conjugation, offset, H, t, Y );
    if( printMatrices )
    {
        DistMatrix<F> W(g);
        Identity( W, m, m );
        if( order == FORWARD )
        {
            ApplyPackedReflectors
            ( side, uplo, VERTICAL, BACKWARD, conjugation, offset, H, t, W );
            Print( Y, "Q" );
            Print( W, "Q^H" );
        }
        else
        {
            ApplyPackedReflectors
            ( side, uplo, VERTICAL, FORWARD, conjugation, offset, H, t, W );
            Print( Y, "Q^H" );
            Print( W, "Q" );
        }
    }
    DistMatrix<F> Z(g);
    Zeros( Z, m, m );
    Herk( uplo, NORMAL, Real(1), Y, Real(0), Z );
    MakeHermitian( uplo, Z );
    
    // Form X := -I + Q^H Q or Q Q^H
    UpdateDiagonal( Z, F(-1) );
    if( printMatrices )
    {
        if( order == FORWARD )
            Print( Z, "Q Q^H - I" );
        else
            Print( Z, "Q^H Q - I" );
    }

    // Compute the maximum deviance
    const Real oneNormOfError = OneNorm( Z );
    const Real infNormOfError = InfinityNorm( Z );
    const Real frobNormOfError = FrobeniusNorm( Z );
    if( g.Rank() == 0 )
    {
        if( order == FORWARD )
        {
            cout << "    ||Q Q^H - I||_1  = " << oneNormOfError << "\n"
                 << "    ||Q Q^H - I||_oo = " << infNormOfError << "\n"
                 << "    ||Q Q^H - I||_F  = " << frobNormOfError << endl;
        }
        else
        {
            cout << "    ||Q^H Q - I||_1  = " << oneNormOfError << "\n"
                 << "    ||Q^H Q - I||_oo = " << infNormOfError << "\n"
                 << "    ||Q^H Q - I||_F  = " << frobNormOfError << endl;
        }
    }
}
コード例 #7
0
inline void
GolubReinschUpper
( DistMatrix<F>& A, DistMatrix<BASE(F),VR,STAR>& s, DistMatrix<F>& V )
{
#ifndef RELEASE
    CallStackEntry entry("svd::GolubReinschUpper");
#endif
    typedef BASE(F) Real;
    const Int m = A.Height();
    const Int n = A.Width();
    const Int k = Min( m, n );
    const Int offdiagonal = ( m>=n ? 1 : -1 );
    const char uplo = ( m>=n ? 'U' : 'L' );
    const Grid& g = A.Grid();

    // Bidiagonalize A
    DistMatrix<F,STAR,STAR> tP( g ), tQ( g );
    Bidiag( A, tP, tQ );

    // Grab copies of the diagonal and sub/super-diagonal of A
    DistMatrix<Real,MD,STAR> d_MD_STAR(g), e_MD_STAR(g);
    A.GetRealPartOfDiagonal( d_MD_STAR );
    A.GetRealPartOfDiagonal( e_MD_STAR, offdiagonal );

    // NOTE: lapack::BidiagQRAlg expects e to be of length k
    DistMatrix<Real,STAR,STAR> d_STAR_STAR( d_MD_STAR ),
                               eHat_STAR_STAR( k, 1, g ),
                               e_STAR_STAR( g );
    View( e_STAR_STAR, eHat_STAR_STAR, 0, 0, k-1, 1 );
    e_STAR_STAR = e_MD_STAR;

    // Initialize U and VAdj to the appropriate identity matrices
    DistMatrix<F,VC,STAR> U_VC_STAR( g );
    DistMatrix<F,STAR,VC> VAdj_STAR_VC( g );
    U_VC_STAR.AlignWith( A );
    VAdj_STAR_VC.AlignWith( V );
    Identity( U_VC_STAR, m, k );
    Identity( VAdj_STAR_VC, k, n );

    // Compute the SVD of the bidiagonal matrix and accumulate the Givens
    // rotations into our local portion of U and VAdj
    Matrix<F>& ULoc = U_VC_STAR.Matrix();
    Matrix<F>& VAdjLoc = VAdj_STAR_VC.Matrix();
    lapack::BidiagQRAlg
    ( uplo, k, VAdjLoc.Width(), ULoc.Height(),
      d_STAR_STAR.Buffer(), e_STAR_STAR.Buffer(), 
      VAdjLoc.Buffer(), VAdjLoc.LDim(), 
      ULoc.Buffer(), ULoc.LDim() );

    // Make a copy of A (for the Householder vectors) and pull the necessary 
    // portions of U and VAdj into a standard matrix dist.
    DistMatrix<F> B( A );
    if( m >= n )
    {
        DistMatrix<F> AT(g), AB(g);
        DistMatrix<F,VC,STAR> UT_VC_STAR(g), UB_VC_STAR(g);
        PartitionDown( A, AT, AB, n );
        PartitionDown( U_VC_STAR, UT_VC_STAR, UB_VC_STAR, n );
        AT = UT_VC_STAR;
        MakeZeros( AB );
        Adjoint( VAdj_STAR_VC, V );
    }
    else
    {
        DistMatrix<F> VT(g), VB(g);
        DistMatrix<F,STAR,VC> VAdjL_STAR_VC(g), VAdjR_STAR_VC(g);
        PartitionDown( V, VT, VB, m );
        PartitionRight( VAdj_STAR_VC, VAdjL_STAR_VC, VAdjR_STAR_VC, m );
        Adjoint( VAdjL_STAR_VC, VT );
        MakeZeros( VB );
    }

    // Backtransform U and V
    bidiag::ApplyU( LEFT, NORMAL, B, tQ, A );
    bidiag::ApplyV( LEFT, NORMAL, B, tP, V );

    // Copy out the appropriate subset of the singular values
    s = d_STAR_STAR;
}
コード例 #8
0
ファイル: TT.hpp プロジェクト: khalid-hasanov/Elemental
inline void
SUMMA_TTB
( Orientation orientationOfA, 
  Orientation orientationOfB,
  T alpha, const DistMatrix<T>& A,
           const DistMatrix<T>& B,
  T beta,        DistMatrix<T>& C )
{
#ifndef RELEASE
    CallStackEntry entry("gemm::SUMMA_TTB");
    if( A.Grid() != B.Grid() || B.Grid() != C.Grid() )
        LogicError("{A,B,C} must have the same grid");
    if( orientationOfA == NORMAL || orientationOfB == NORMAL )
        LogicError("A and B must be (Conjugate)Transposed");
    if( A.Width()  != C.Height() ||
        B.Height() != C.Width()  ||
        A.Height() != B.Width()    )
    {
        std::ostringstream msg;
        msg << "Nonconformal matrices: \n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  B ~ " << B.Height() << " x " << B.Width() << "\n"
            << "  C ~ " << C.Height() << " x " << C.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<T> AL(g), AR(g),
                  A0(g), A1(g), A2(g);
    DistMatrix<T> CT(g),  C0(g),
                  CB(g),  C1(g),
                          C2(g);

    // Temporary distributions
    DistMatrix<T,VR,  STAR> A1_VR_STAR(g);
    DistMatrix<T,STAR,MR  > A1AdjOrTrans_STAR_MR(g);
    DistMatrix<T,STAR,MC  > D1_STAR_MC(g);
    DistMatrix<T,MR,  MC  > D1_MR_MC(g);
    DistMatrix<T> D1(g);

    A1_VR_STAR.AlignWith( B );
    A1AdjOrTrans_STAR_MR.AlignWith( B );
    D1_STAR_MC.AlignWith( B );

    // Start the algorithm 
    Scale( beta, C );
    LockedPartitionRight( A, AL, AR, 0 );
    PartitionDown
    ( C, CT,
         CB, 0 );
    while( AR.Width() > 0 )
    {
        LockedRepartitionRight
        ( AL, /**/     AR,
          A0, /**/ A1, A2 );
 
        RepartitionDown
        ( CT,  C0,
         /**/ /**/
               C1,
          CB,  C2 );

        D1.AlignWith( C1 );
        //--------------------------------------------------------------------//
        A1_VR_STAR = A1;
        if( orientationOfA == ADJOINT )
            A1AdjOrTrans_STAR_MR.AdjointFrom( A1_VR_STAR );
        else
            A1AdjOrTrans_STAR_MR.TransposeFrom( A1_VR_STAR );
 
        // D1[*,MC] := alpha (A1[MR,*])^[T/H] (B[MC,MR])^[T/H]
        //           = alpha (A1^[T/H])[*,MR] (B^[T/H])[MR,MC]
        LocalGemm
        ( NORMAL, orientationOfB, alpha, A1AdjOrTrans_STAR_MR, B, D1_STAR_MC );

        // C1[MC,MR] += scattered & transposed D1[*,MC] summed over grid rows
        D1_MR_MC.SumScatterFrom( D1_STAR_MC );
        D1 = D1_MR_MC; 
        Axpy( T(1), D1, C1 );
        //--------------------------------------------------------------------//

        SlideLockedPartitionRight
        ( AL,     /**/ AR,
          A0, A1, /**/ A2 );

        SlidePartitionDown
        ( CT,  C0,
               C1,
         /**/ /**/
          CB,  C2 );
    }
}
コード例 #9
0
ファイル: TT.hpp プロジェクト: khalid-hasanov/Elemental
inline void
SUMMA_TTA
( Orientation orientationOfA, 
  Orientation orientationOfB,
  T alpha, const DistMatrix<T>& A,
           const DistMatrix<T>& B,
  T beta,        DistMatrix<T>& C )
{
#ifndef RELEASE
    CallStackEntry entry("gemm::SUMMA_TTA");
    if( A.Grid() != B.Grid() || B.Grid() != C.Grid() )
        LogicError("{A,B,C} must have the same grid");
    if( orientationOfA == NORMAL || orientationOfB == NORMAL )
        LogicError("A and B must be (Conjugate)Transposed");
    if( A.Width()  != C.Height() ||
        B.Height() != C.Width()  ||
        A.Height() != B.Width()    )
    {
        std::ostringstream msg;
        msg << "Nonconformal matrices: \n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  B ~ " << B.Height() << " x " << B.Width() << "\n"
            << "  C ~ " << C.Height() << " x " << C.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<T> BT(g),  B0(g),
                  BB(g),  B1(g),
                          B2(g);
    DistMatrix<T> CL(g), CR(g),
                  C0(g), C1(g), C2(g);

    // Temporary distributions
    DistMatrix<T,STAR,MC  > B1_STAR_MC(g);
    DistMatrix<T,MR,  STAR> D1_MR_STAR(g);
    DistMatrix<T,MR,  MC  > D1_MR_MC(g);
    DistMatrix<T> D1(g);

    B1_STAR_MC.AlignWith( A ); 
    D1_MR_STAR.AlignWith( A );  

    // Start the algorithm
    Scale( beta, C );
    LockedPartitionDown
    ( B, BT,
         BB, 0 );
    PartitionRight( C, CL, CR, 0 );
    while( BB.Height() > 0 )
    {
        LockedRepartitionDown
        ( BT,  B0,
         /**/ /**/
               B1,
          BB,  B2 );

        RepartitionRight
        ( CL, /**/     CR,
          C0, /**/ C1, C2 );

        D1.AlignWith( C1 );  
        //--------------------------------------------------------------------//
        B1_STAR_MC = B1; // B1[*,MC] <- B1[MC,MR]

        // D1[MR,*] := alpha (A[MC,MR])^T (B1[*,MC])^T
        //           = alpha (A^T)[MR,MC] (B1^T)[MC,*]
        LocalGemm
        ( orientationOfA, orientationOfB, alpha, A, B1_STAR_MC, D1_MR_STAR );

        // C1[MC,MR] += scattered & transposed D1[MR,*] summed over grid cols
        D1_MR_MC.SumScatterFrom( D1_MR_STAR );
        D1 = D1_MR_MC; 
        Axpy( T(1), D1, C1 );
        //--------------------------------------------------------------------//
        
        SlideLockedPartitionDown
        ( BT,  B0,
               B1,
         /**/ /**/
          BB,  B2 );

        SlidePartitionRight
        ( CL,     /**/ CR,
          C0, C1, /**/ C2 ); 
    }
}
コード例 #10
0
void TestCorrectness
( bool print,
  UpperOrLower uplo, 
  const DistMatrix<F>& A, 
  const DistMatrix<F,STAR,STAR>& t,
        DistMatrix<F>& AOrig )
{
    typedef BASE(F) Real;
    const Grid& g = A.Grid();
    const Int m = AOrig.Height();

    Int subdiagonal = ( uplo==LOWER ? -1 : +1 );

    if( g.Rank() == 0 )
        cout << "Testing error..." << endl;

    // Grab the diagonal and subdiagonal of the symmetric tridiagonal matrix
    DistMatrix<Real,MD,STAR> d(g);
    DistMatrix<Real,MD,STAR> e(g);
    A.GetRealPartOfDiagonal( d );
    A.GetRealPartOfDiagonal( e, subdiagonal );
     
    // Grab a full copy of e so that we may fill the opposite subdiagonal 
    DistMatrix<Real,STAR,STAR> e_STAR_STAR(g);
    DistMatrix<Real,MD,STAR> eOpposite(g);
    e_STAR_STAR = e;
    eOpposite.AlignWithDiagonal( A.DistData(), -subdiagonal );
    eOpposite = e_STAR_STAR;
    
    // Zero B and then fill its tridiagonal
    DistMatrix<F> B(g);
    B.AlignWith( A );
    Zeros( B, m, m );
    B.SetRealPartOfDiagonal( d );
    B.SetRealPartOfDiagonal( e, subdiagonal );
    B.SetRealPartOfDiagonal( eOpposite, -subdiagonal );
    if( print )
        Print( B, "Tridiagonal" );

    // Reverse the accumulated Householder transforms, ignoring symmetry
    hermitian_tridiag::ApplyQ( LEFT, uplo, NORMAL, A, t, B );
    hermitian_tridiag::ApplyQ( RIGHT, uplo, ADJOINT, A, t, B );
    if( print )
        Print( B, "Rotated tridiagonal" );

    // Compare the appropriate triangle of AOrig and B
    MakeTriangular( uplo, AOrig );
    MakeTriangular( uplo, B );
    Axpy( F(-1), AOrig, B );
    if( print )
        Print( B, "Error in rotated tridiagonal" );

    const Real infNormOfAOrig = HermitianInfinityNorm( uplo, AOrig );
    const Real frobNormOfAOrig = HermitianFrobeniusNorm( uplo, AOrig );
    const Real infNormOfError = HermitianInfinityNorm( uplo, B );
    const Real frobNormOfError = HermitianFrobeniusNorm( uplo, B );
    if( g.Rank() == 0 )
    {
        cout << "    ||AOrig||_1 = ||AOrig||_oo = " << infNormOfAOrig << "\n"
             << "    ||AOrig||_F                = " << frobNormOfAOrig << "\n"
             << "    ||AOrig - Q^H A Q||_oo     = " << infNormOfError << "\n"
             << "    ||AOrig - Q^H A Q||_F      = " << frobNormOfError << endl;
    }
}
コード例 #11
0
ファイル: UVar4.hpp プロジェクト: khalid-hasanov/Elemental
inline void
TwoSidedTrsmUVar4
( UnitOrNonUnit diag, DistMatrix<F>& A, const DistMatrix<F>& U )
{
#ifndef RELEASE
    CallStackEntry entry("internal::TwoSidedTrsmUVar4");
    if( A.Height() != A.Width() )
        LogicError("A must be square");
    if( U.Height() != U.Width() )
        LogicError("Triangular matrices must be square");
    if( A.Height() != U.Height() )
        LogicError("A and U must be the same size");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F>
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);
    DistMatrix<F>
        UTL(g), UTR(g),  U00(g), U01(g), U02(g),
        UBL(g), UBR(g),  U10(g), U11(g), U12(g),
                         U20(g), U21(g), U22(g);

    // Temporary distributions
    DistMatrix<F,VC,  STAR> A01_VC_STAR(g);
    DistMatrix<F,STAR,MC  > A01Trans_STAR_MC(g);
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,STAR,VC  > A12_STAR_VC(g);
    DistMatrix<F,STAR,MC  > A12_STAR_MC(g);
    DistMatrix<F,STAR,MR  > A12_STAR_MR(g);
    DistMatrix<F,STAR,STAR> U11_STAR_STAR(g);
    DistMatrix<F,MR,  STAR> U12Trans_MR_STAR(g);
    DistMatrix<F,VR,  STAR> U12Trans_VR_STAR(g);
    DistMatrix<F,STAR,VR  > U12_STAR_VR(g);
    DistMatrix<F,STAR,VC  > U12_STAR_VC(g);
    DistMatrix<F,STAR,MC  > U12_STAR_MC(g);
    DistMatrix<F,STAR,VR  > Y12_STAR_VR(g);

    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    LockedPartitionDownDiagonal
    ( U, UTL, UTR,
         UBL, UBR, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        LockedRepartitionDownDiagonal
        ( UTL, /**/ UTR,  U00, /**/ U01, U02,
         /*************/ /******************/
               /**/       U10, /**/ U11, U12,
          UBL, /**/ UBR,  U20, /**/ U21, U22 );

        A01_VC_STAR.AlignWith( A02 );
        A01Trans_STAR_MC.AlignWith( A02 );
        A12_STAR_VR.AlignWith( A22 );
        A12_STAR_VC.AlignWith( A22 );
        A12_STAR_MC.AlignWith( A22 );
        A12_STAR_MR.AlignWith( A22 );
        U12Trans_MR_STAR.AlignWith( A02 );
        U12Trans_VR_STAR.AlignWith( A02 );
        U12_STAR_VR.AlignWith( A02 );
        U12_STAR_VC.AlignWith( A22 );
        U12_STAR_MC.AlignWith( A22 );
        Y12_STAR_VR.AlignWith( A12 );
        //--------------------------------------------------------------------//
        // A01 := A01 inv(U11)
        A01_VC_STAR = A01;
        U11_STAR_STAR = U11;
        LocalTrsm
        ( RIGHT, UPPER, NORMAL, diag, F(1), U11_STAR_STAR, A01_VC_STAR );
        A01 = A01_VC_STAR;

        // A11 := inv(U11)' A11 inv(U11)
        A11_STAR_STAR = A11;
        LocalTwoSidedTrsm( UPPER, diag, A11_STAR_STAR, U11_STAR_STAR );
        A11 = A11_STAR_STAR;

        // A02 := A02 - A01 U12
        A01Trans_STAR_MC.TransposeFrom( A01_VC_STAR );
        U12Trans_MR_STAR.TransposeFrom( U12 );
        LocalGemm
        ( TRANSPOSE, TRANSPOSE, 
          F(-1), A01Trans_STAR_MC, U12Trans_MR_STAR, F(1), A02 );

        // Y12 := A11 U12
        U12Trans_VR_STAR = U12Trans_MR_STAR;
        Zeros( U12_STAR_VR, A12.Height(), A12.Width() );
        Transpose( U12Trans_VR_STAR.Matrix(), U12_STAR_VR.Matrix() );
        Zeros( Y12_STAR_VR, A12.Height(), A12.Width() );
        Hemm
        ( LEFT, UPPER, 
          F(1), A11_STAR_STAR.Matrix(), U12_STAR_VR.Matrix(), 
          F(0), Y12_STAR_VR.Matrix() );

        // A12 := inv(U11)' A12
        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, UPPER, ADJOINT, diag, F(1), U11_STAR_STAR, A12_STAR_VR );

        // A12 := A12 - 1/2 Y12
        Axpy( F(-1)/F(2), Y12_STAR_VR, A12_STAR_VR );

        // A22 := A22 - (A12' U12 + U12' A12)
        A12_STAR_MR = A12_STAR_VR;
        A12_STAR_VC = A12_STAR_VR;
        U12_STAR_VC = U12_STAR_VR;
        A12_STAR_MC = A12_STAR_VC;
        U12_STAR_MC = U12_STAR_VC;
        LocalTrr2k
        ( UPPER, ADJOINT, TRANSPOSE, ADJOINT,
          F(-1), A12_STAR_MC, U12Trans_MR_STAR,
                 U12_STAR_MC, A12_STAR_MR,
          F(1), A22 );

        // A12 := A12 - 1/2 Y12
        Axpy( F(-1)/F(2), Y12_STAR_VR, A12_STAR_VR );
        A12 = A12_STAR_VR;
        //--------------------------------------------------------------------//

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );

        SlideLockedPartitionDownDiagonal
        ( UTL, /**/ UTR,  U00, U01, /**/ U02,
               /**/       U10, U11, /**/ U12,
         /**********************************/
          UBL, /**/ UBR,  U20, U21, /**/ U22 );
    }
}
コード例 #12
0
ファイル: QR.cpp プロジェクト: jimgoo/Elemental
void TestCorrectness
( bool print,
  const DistMatrix<Complex<R> >& A,
  const DistMatrix<Complex<R>,MD,STAR>& t,
        DistMatrix<Complex<R> >& AOrig )
{
    typedef Complex<R> C;

    const Grid& g = A.Grid();
    const int m = A.Height();
    const int n = A.Width();
    const int minDim = std::min(m,n);

    if( g.Rank() == 0 )
        cout << "  Testing orthogonality of Q..." << endl;

    // Form Z := Q^H Q as an approximation to identity
    DistMatrix<C> Z(g);
    Identity( m, n, Z );
    ApplyPackedReflectors
    ( LEFT, LOWER, VERTICAL, BACKWARD, UNCONJUGATED, 0, A, t, Z );
    ApplyPackedReflectors
    ( LEFT, LOWER, VERTICAL, FORWARD, CONJUGATED, 0, A, t, Z );
    
    DistMatrix<C> ZUpper(g);
    View( ZUpper, Z, 0, 0, minDim, minDim );

    // Form Identity
    DistMatrix<C> X(g);
    Identity( minDim, minDim, X );

    // Form X := I - Q^H Q
    Axpy( C(-1), ZUpper, X );

    R oneNormOfError = Norm( X, ONE_NORM );
    R infNormOfError = Norm( X, INFINITY_NORM );
    R frobNormOfError = Norm( X, FROBENIUS_NORM );
    if( g.Rank() == 0 )
    {
        cout << "    ||Q^H Q - I||_1  = " << oneNormOfError << "\n"
             << "    ||Q^H Q - I||_oo = " << infNormOfError << "\n"
             << "    ||Q^H Q - I||_F  = " << frobNormOfError << endl;
    }

    if( g.Rank() == 0 )
        cout << "  Testing if A = QR..." << endl;

    // Form Q R
    DistMatrix<C> U( A );
    MakeTriangular( UPPER, U );
    ApplyPackedReflectors
    ( LEFT, LOWER, VERTICAL, BACKWARD, UNCONJUGATED, 0, A, t, U );

    // Form Q R - A
    Axpy( C(-1), AOrig, U );
    
    const R oneNormOfA = Norm( AOrig, ONE_NORM );
    const R infNormOfA = Norm( AOrig, INFINITY_NORM );
    const R frobNormOfA = Norm( AOrig, FROBENIUS_NORM );
    oneNormOfError = Norm( U, ONE_NORM );
    infNormOfError = Norm( U, INFINITY_NORM );
    frobNormOfError = Norm( U, FROBENIUS_NORM );
    if( g.Rank() == 0 )
    {
        cout << "    ||A||_1       = " << oneNormOfA << "\n"
             << "    ||A||_oo      = " << infNormOfA << "\n"
             << "    ||A||_F       = " << frobNormOfA << "\n"
             << "    ||A - QR||_1  = " << oneNormOfError << "\n"
             << "    ||A - QR||_oo = " << infNormOfError << "\n"
             << "    ||A - QR||_F  = " << frobNormOfError << endl;
    }
}
コード例 #13
0
ファイル: CholeskyUVar2.hpp プロジェクト: mcg1969/Elemental
inline void
CholeskyUVar2( DistMatrix<F>& A )
{
#ifndef RELEASE
    PushCallStack("hpd_inverse::CholeskyUVar2");
    if( A.Height() != A.Width() )
        throw std::logic_error("Nonsquare matrices cannot be triangular");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F> 
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);

    // Temporary distributions
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,VC,  STAR> A01_VC_STAR(g);
    DistMatrix<F,VR,  STAR> A01_VR_STAR(g);
    DistMatrix<F,STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,STAR,MC  > A01Trans_STAR_MC(g);
    DistMatrix<F,MR,  STAR> A01_MR_STAR(g);
    DistMatrix<F,STAR,MR  > A01Adj_STAR_MR(g);
    DistMatrix<F,STAR,MR  > A12_STAR_MR(g);
    DistMatrix<F,STAR,MC  > A12_STAR_MC(g);

    // Start the algorithm
    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        A01_VC_STAR.AlignWith( A00 );
        A12_STAR_VR.AlignWith( A02 );
        A01Trans_STAR_MC.AlignWith( A00 );
        A01_VR_STAR.AlignWith( A00 );
        A01Adj_STAR_MR.AlignWith( A00 );
        A12_STAR_MR.AlignWith( A02 );
        A12_STAR_MC.AlignWith( A22 );
        //--------------------------------------------------------------------//
        A11_STAR_STAR = A11;
        LocalCholesky( UPPER, A11_STAR_STAR );

        A01_VC_STAR = A01;
        LocalTrsm
        ( RIGHT, UPPER, NORMAL, NON_UNIT, F(1), A11_STAR_STAR, A01_VC_STAR );

        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, UPPER, ADJOINT, NON_UNIT, F(1), A11_STAR_STAR, A12_STAR_VR );

        A01Trans_STAR_MC.TransposeFrom( A01_VC_STAR );
        A01_VR_STAR = A01_VC_STAR;
        A01Adj_STAR_MR.AdjointFrom( A01_VR_STAR );
        LocalTrrk
        ( UPPER, TRANSPOSE,
          F(1), A01Trans_STAR_MC, A01Adj_STAR_MR, F(1), A00 );

        A12_STAR_MR = A12_STAR_VR;
        LocalGemm
        ( TRANSPOSE, NORMAL, F(-1), A01Trans_STAR_MC, A12_STAR_MR, F(1), A02 );

        A12_STAR_MC = A12_STAR_VR;
        LocalTrrk
        ( UPPER, ADJOINT,
          F(-1), A12_STAR_MC, A12_STAR_MR, F(1), A22 );

        LocalTrsm
        ( RIGHT, UPPER, ADJOINT, NON_UNIT, F(1), A11_STAR_STAR, A01_VC_STAR );

        LocalTrsm
        ( LEFT, UPPER, NORMAL, NON_UNIT, F(-1), A11_STAR_STAR, A12_STAR_VR );

        LocalTriangularInverse( UPPER, NON_UNIT, A11_STAR_STAR );

        LocalTrtrmm( ADJOINT, UPPER, A11_STAR_STAR );

        A11 = A11_STAR_STAR;
        A01 = A01_VC_STAR;
        A12 = A12_STAR_VR;
        //--------------------------------------------------------------------//
        A01_VC_STAR.FreeAlignments();
        A12_STAR_VR.FreeAlignments();
        A01Trans_STAR_MC.FreeAlignments();
        A01_VR_STAR.FreeAlignments();
        A01Adj_STAR_MR.FreeAlignments();
        A12_STAR_MR.FreeAlignments();
        A12_STAR_MC.FreeAlignments();

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );
    }
#ifndef RELEASE
    PopCallStack();
#endif
}
コード例 #14
0
ファイル: UVar3.hpp プロジェクト: ahmadia/Elemental-1
inline void
UVar3( DistMatrix<F>& A )
{
#ifndef RELEASE
    CallStackEntry entry("cholesky::UVar3");
    if( A.Height() != A.Width() )
        throw std::logic_error
        ("Can only compute Cholesky factor of square matrices");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F> 
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);

    // Temporary matrix distributions
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,STAR,MC  > A12_STAR_MC(g);
    DistMatrix<F,STAR,MR  > A12_STAR_MR(g);

    // Start the algorithm
    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 ); 
    while( ABR.Height() > 0 )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        A12_STAR_MC.AlignWith( A22 );
        A12_STAR_MR.AlignWith( A22 );
        A12_STAR_VR.AlignWith( A22 );
        //--------------------------------------------------------------------//
        A11_STAR_STAR = A11;
        LocalCholesky( UPPER, A11_STAR_STAR );
        A11 = A11_STAR_STAR;

        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, UPPER, ADJOINT, NON_UNIT, F(1), A11_STAR_STAR, A12_STAR_VR );

        A12_STAR_MC = A12_STAR_VR;
        A12_STAR_MR = A12_STAR_VR;
        LocalTrrk
        ( UPPER, ADJOINT, F(-1), A12_STAR_MC, A12_STAR_MR, F(1), A22 );
        A12 = A12_STAR_MR;
        //--------------------------------------------------------------------//
        A12_STAR_MC.FreeAlignments();
        A12_STAR_MR.FreeAlignments();
        A12_STAR_VR.FreeAlignments();

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );
    }
}
コード例 #15
0
inline void
MakeNormalUniformSpectrum
( DistMatrix<Complex<R>,U,V>& A, Complex<R> center=0, R radius=1 )
{
#ifndef RELEASE
    CallStackEntry entry("MakeNormalUniformSpectrum");
#endif
    typedef Complex<R> C;
    if( A.Height() != A.Width() )
        LogicError("Cannot make a non-square matrix normal");
    const Grid& grid = A.Grid();
    const bool standardDist = ( U == MC && V == MR );

    // Sample the diagonal matrix D from the ball B_radius(center)
    // and then rotate it with a random Householder similarity transformation:
    //
    //  (I-2uu^H) D (I-2uu^H)^H = D - 2(u (Conj(D) u)^H + (D u) u^H) + 
    //                                (4 u^H D u) u u^H
    //

    // Form d and D
    const Int n = A.Height();
    std::vector<C> d( n );
    if( grid.Rank() == 0 )
        for( Int j=0; j<n; ++j )
            d[j] = SampleBall<C>( center, radius );
    mpi::Broadcast( &d[0], n, 0, grid.Comm() );
    DistMatrix<C> ABackup( grid );
    if( standardDist )
        Diagonal( A, d );
    else
    {
        ABackup.AlignWith( A );
        Diagonal( ABackup, d );
    }

    // Form u 
    DistMatrix<C> u( grid );
    if( standardDist )
        u.AlignWith( A );
    else
        u.AlignWith( ABackup );
    Uniform( u, n, 1 );
    const R origNorm = Nrm2( u );
    Scale( 1/origNorm, u );

    // Form v := D u
    DistMatrix<C> v( grid );
    if( standardDist )
        v.AlignWith( A );
    else
        v.AlignWith( ABackup );
    v.ResizeTo( n, 1 );
    if( v.LocalWidth() == 1 )
    {
        const Int colShift = v.ColShift();
        const Int colStride = v.ColStride();
        const Int localHeight = v.LocalHeight();
        for( Int iLoc=0; iLoc<localHeight; ++iLoc )
        {
            const Int i = colShift + iLoc*colStride;
            v.SetLocal( iLoc, 0, d[i]*u.GetLocal(iLoc,0) );
        }
    }

    // Form w := Conj(D) u
    DistMatrix<C> w( grid );
    if( standardDist )
        w.AlignWith( A );
    else
        w.AlignWith( ABackup );
    w.ResizeTo( n, 1 );
    if( w.LocalWidth() == 1 )
    {
        const Int colShift = w.ColShift();
        const Int colStride = w.ColStride();
        const Int localHeight = w.LocalHeight();
        for( Int iLoc=0; iLoc<localHeight; ++iLoc )
        {
            const Int i = colShift + iLoc*colStride;
            w.SetLocal( iLoc, 0, Conj(d[i])*u.GetLocal(iLoc,0) );
        }
    }

    // Update A := A - 2(u w^H + v u^H)
    if( standardDist )
    {
        Ger( C(-2), u, w, A );
        Ger( C(-2), v, u, A );
    }
    else
    {
        Ger( C(-2), u, w, ABackup );
        Ger( C(-2), v, u, ABackup );
    }

    // Form \gamma := 4 u^H (D u) = 4 (u,Du)
    const C gamma = 4*Dot(u,v);

    // Update A := A + gamma u u^H
    if( standardDist )
        Ger( gamma, u, u, A );
    else
        Ger( gamma, u, u, ABackup );

    // Copy the result into the correct distribution
    if( !standardDist )
        A = ABackup;
}
コード例 #16
0
ファイル: TT.hpp プロジェクト: khalid-hasanov/Elemental
inline void
SUMMA_TTC
( Orientation orientationOfA, 
  Orientation orientationOfB,
  T alpha, const DistMatrix<T>& A,
           const DistMatrix<T>& B,
  T beta,        DistMatrix<T>& C )
{
#ifndef RELEASE
    CallStackEntry entry("gemm::SUMMA_TTC");
    if( A.Grid() != B.Grid() || B.Grid() != C.Grid() )
        LogicError("{A,B,C} must have the same grid");
    if( orientationOfA == NORMAL || orientationOfB == NORMAL )
        LogicError("A and B must be (Conjugate)Transposed");
    if( A.Width()  != C.Height() ||
        B.Height() != C.Width()  ||
        A.Height() != B.Width()    )
    {
        std::ostringstream msg;
        msg << "Nonconformal matrices: \n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  B ~ " << B.Height() << " x " << B.Width() << "\n"
            << "  C ~ " << C.Height() << " x " << C.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<T> AT(g),  A0(g),
                  AB(g),  A1(g),
                          A2(g);
    DistMatrix<T> BL(g), BR(g),
                  B0(g), B1(g), B2(g);

    // Temporary distributions
    DistMatrix<T,STAR,MC  > A1_STAR_MC(g);
    DistMatrix<T,VR,  STAR> B1_VR_STAR(g);
    DistMatrix<T,STAR,MR  > B1AdjOrTrans_STAR_MR(g);

    A1_STAR_MC.AlignWith( C );
    B1_VR_STAR.AlignWith( C );
    B1AdjOrTrans_STAR_MR.AlignWith( C );
    
    // Start the algorithm    
    Scale( beta, C );
    LockedPartitionDown
    ( A, AT,
         AB, 0 ); 
    LockedPartitionRight( B, BL, BR, 0 );
    while( AB.Height() > 0 )
    {
        LockedRepartitionDown
        ( AT,  A0,
         /**/ /**/
               A1,
          AB,  A2 );

        LockedRepartitionRight
        ( BL, /**/     BR,
          B0, /**/ B1, B2 );

        //--------------------------------------------------------------------//
        A1_STAR_MC = A1; 
        B1_VR_STAR = B1;
        if( orientationOfB == ADJOINT )
            B1AdjOrTrans_STAR_MR.AdjointFrom( B1_VR_STAR );
        else
            B1AdjOrTrans_STAR_MR.TransposeFrom( B1_VR_STAR );

        // C[MC,MR] += alpha (A1[*,MC])^[T/H] (B1[MR,*])^[T/H]
        //           = alpha (A1^[T/H])[MC,*] (B1^[T/H])[*,MR]
        LocalGemm
        ( orientationOfA, NORMAL, 
          alpha, A1_STAR_MC, B1AdjOrTrans_STAR_MR, T(1), C );
        //--------------------------------------------------------------------//

        SlideLockedPartitionDown
        ( AT,  A0,
               A1,
         /**/ /**/
          AB,  A2 );

        SlideLockedPartitionRight
        ( BL,     /**/ BR,
          B0, B1, /**/ B2 );
    }
}
コード例 #17
0
void RowAllToAllPromote
( const DistMatrix<T,                U,             V   >& A,
        DistMatrix<T,PartialUnionCol<U,V>(),Partial<V>()>& B )
{
    DEBUG_ONLY(CSE cse("copy::RowAllToAllPromote"))
    AssertSameGrids( A, B );

    const Int height = A.Height();
    const Int width = A.Width();
    B.AlignRowsAndResize
    ( Mod(A.RowAlign(),B.RowStride()), height, width, false, false );
    if( !B.Participating() )
        return;

    const Int rowAlign = A.RowAlign();

    const Int rowStride = A.RowStride();
    const Int rowStridePart = A.PartialRowStride();
    const Int rowStrideUnion = A.PartialUnionRowStride();
    const Int rowRankPart = A.PartialRowRank();
    const Int rowDiff = B.RowAlign() - Mod(rowAlign,rowStridePart);

    const Int maxLocalWidth = MaxLength(width,rowStride);
    const Int maxLocalHeight = MaxLength(height,rowStrideUnion);
    const Int portionSize = mpi::Pad( maxLocalHeight*maxLocalWidth );

    if( rowDiff == 0 )
    {
        if( A.PartialUnionRowStride() == 1 )
        {
            Copy( A.LockedMatrix(), B.Matrix() );
        }
        else
        {
            vector<T> buffer;
            FastResize( buffer, 2*rowStrideUnion*portionSize );
            T* firstBuf  = &buffer[0];
            T* secondBuf = &buffer[rowStrideUnion*portionSize];

            // Pack            
            util::ColStridedPack
            ( height, A.LocalWidth(),
              B.ColAlign(), rowStrideUnion,
              A.LockedBuffer(), A.LDim(),
              firstBuf,         portionSize );

            // Simultaneously Gather in rows and Scatter in columns
            mpi::AllToAll
            ( firstBuf,  portionSize,
              secondBuf, portionSize, A.PartialUnionRowComm() );

            // Unpack
            util::PartialRowStridedUnpack
            ( B.LocalHeight(), width,
              rowAlign, rowStride,
              rowStrideUnion, rowStridePart, rowRankPart,
              B.RowShift(),
              secondBuf, portionSize,
              B.Buffer(), B.LDim() );
        }
    }
    else
    {
#ifdef EL_UNALIGNED_WARNINGS
        if( A.Grid().Rank() == 0 )
            cerr << "Unaligned RowAllToAllPromote" << endl;
#endif
        const Int sendRowRankPart = Mod( rowRankPart+rowDiff, rowStridePart );
        const Int recvRowRankPart = Mod( rowRankPart-rowDiff, rowStridePart );

        vector<T> buffer;
        FastResize( buffer, 2*rowStrideUnion*portionSize );
        T* firstBuf  = &buffer[0];
        T* secondBuf = &buffer[rowStrideUnion*portionSize];

        // Pack
        util::ColStridedPack
        ( height, A.LocalWidth(),
          B.ColAlign(), rowStrideUnion,
          A.LockedBuffer(), A.LDim(),
          secondBuf,        portionSize );

        // Realign the input
        mpi::SendRecv
        ( secondBuf, rowStrideUnion*portionSize, sendRowRankPart,
          firstBuf,  rowStrideUnion*portionSize, recvRowRankPart,
          A.PartialRowComm() );

        // Simultaneously Scatter in rows and Gather in columns
        mpi::AllToAll
        ( firstBuf,  portionSize,
          secondBuf, portionSize, A.PartialUnionRowComm() );

        // Unpack
        util::PartialRowStridedUnpack
        ( B.LocalHeight(), width,
          rowAlign, rowStride,
          rowStrideUnion, rowStridePart, recvRowRankPart,
          B.RowShift(),
          secondBuf, portionSize,
          B.Buffer(), B.LDim() );
    }
}
コード例 #18
0
ファイル: LU.hpp プロジェクト: ahmadia/Elemental-1
inline void
LU( DistMatrix<F>& A, DistMatrix<int,VC,STAR>& p )
{
#ifndef RELEASE
    CallStackEntry entry("LU");
    if( A.Grid() != p.Grid() )
        throw std::logic_error("{A,p} must be distributed over the same grid");
    if( p.Viewing() && 
        (std::min(A.Height(),A.Width()) != p.Height() || p.Width() != 1) ) 
        throw std::logic_error
        ("p must be a vector of the same height as the min dimension of A.");
#endif
    const Grid& g = A.Grid();
    if( !p.Viewing() )
        p.ResizeTo( std::min(A.Height(),A.Width()), 1 );

    // Matrix views
    DistMatrix<F>
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),  AB(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),  
                         A20(g), A21(g), A22(g);

    DistMatrix<int,VC,STAR>
        pT(g),  p0(g), 
        pB(g),  p1(g),
                p2(g);

    // Temporary distributions
    DistMatrix<F,  STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,  MC,  STAR> A21_MC_STAR(g);
    DistMatrix<F,  STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,  STAR,MR  > A12_STAR_MR(g);
    DistMatrix<int,STAR,STAR> p1_STAR_STAR(g);

    // Pivot composition
    std::vector<int> image, preimage;

    // Start the algorithm
    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    PartitionDown
    ( p, pT,
         pB, 0 );
    while( ATL.Height() < A.Height() && ATL.Width() < A.Width() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        RepartitionDown
        ( pT,  p0,
         /**/ /**/
               p1,
          pB,  p2 );

        View1x2( AB, ABL, ABR );

        const int pivotOffset = A01.Height();
        A12_STAR_VR.AlignWith( A22 );
        A12_STAR_MR.AlignWith( A22 );
        A21_MC_STAR.AlignWith( A22 );
        A11_STAR_STAR.ResizeTo( A11.Height(), A11.Width() );
        p1_STAR_STAR.ResizeTo( p1.Height(), 1 );
        //--------------------------------------------------------------------//
        A21_MC_STAR = A21;
        A11_STAR_STAR = A11;
        lu::Panel( A11_STAR_STAR, A21_MC_STAR, p1_STAR_STAR, pivotOffset );
        ComposePivots( p1_STAR_STAR, pivotOffset, image, preimage );
        ApplyRowPivots( AB, image, preimage );

        // Perhaps we should give up perfectly distributing this operation since
        // it's total contribution is only O(n^2)
        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, LOWER, NORMAL, UNIT, F(1), A11_STAR_STAR, A12_STAR_VR );

        A12_STAR_MR = A12_STAR_VR;
        LocalGemm( NORMAL, NORMAL, F(-1), A21_MC_STAR, A12_STAR_MR, F(1), A22 );

        A11 = A11_STAR_STAR;
        A12 = A12_STAR_MR;
        A21 = A21_MC_STAR;
        p1 = p1_STAR_STAR;
        //--------------------------------------------------------------------//
        A12_STAR_VR.FreeAlignments();
        A12_STAR_MR.FreeAlignments();
        A21_MC_STAR.FreeAlignments();

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );

        SlidePartitionDown
        ( pT,  p0,
               p1,
         /**/ /**/
          pB,  p2 );
    }
}
コード例 #19
0
inline void
GolubReinschUpper_FLA
( DistMatrix<F>& A, DistMatrix<BASE(F),VR,STAR>& s, DistMatrix<F>& V )
{
#ifndef RELEASE
    CallStackEntry entry("svd::GolubReinschUpper_FLA");
#endif
    typedef BASE(F) Real;
    const Int m = A.Height();
    const Int n = A.Width();
    const Int k = Min( m, n );
    const Int offdiagonal = ( m>=n ? 1 : -1 );
    const Grid& g = A.Grid();

    // Bidiagonalize A
    DistMatrix<F,STAR,STAR> tP(g), tQ(g);
    Bidiag( A, tP, tQ );

    // Grab copies of the diagonal and sub/super-diagonal of A
    DistMatrix<Real,MD,STAR> d_MD_STAR(g), e_MD_STAR(g);
    A.GetRealPartOfDiagonal( d_MD_STAR );
    A.GetRealPartOfDiagonal( e_MD_STAR, offdiagonal );

    // In order to use serial QR kernels, we need the full bidiagonal matrix
    // on each process
    DistMatrix<Real,STAR,STAR> d_STAR_STAR( d_MD_STAR ),
                               e_STAR_STAR( e_MD_STAR );

    // Initialize U and VAdj to the appropriate identity matrices
    DistMatrix<F,VC,STAR> U_VC_STAR(g), V_VC_STAR(g);
    U_VC_STAR.AlignWith( A );
    V_VC_STAR.AlignWith( V );
    Identity( U_VC_STAR, m, k );
    Identity( V_VC_STAR, n, k );

    FlaSVD
    ( k, U_VC_STAR.LocalHeight(), V_VC_STAR.LocalHeight(),
      d_STAR_STAR.Buffer(), e_STAR_STAR.Buffer(),
      U_VC_STAR.Buffer(), U_VC_STAR.LDim(),
      V_VC_STAR.Buffer(), V_VC_STAR.LDim() );

    // Make a copy of A (for the Householder vectors) and pull the necessary 
    // portions of U and V into a standard matrix dist.
    DistMatrix<F> B( A );
    if( m >= n )
    {
        DistMatrix<F> AT(g), AB(g);
        DistMatrix<F,VC,STAR> UT_VC_STAR(g), UB_VC_STAR(g);
        PartitionDown( A, AT, AB, n );
        PartitionDown( U_VC_STAR, UT_VC_STAR, UB_VC_STAR, n );
        AT = UT_VC_STAR;
        MakeZeros( AB );
        V = V_VC_STAR;
    }
    else
    {
        DistMatrix<F> VT(g), VB(g);
        DistMatrix<F,VC,STAR> VT_VC_STAR(g), VB_VC_STAR(g);
        PartitionDown( V, VT, VB, m );
        PartitionDown( V_VC_STAR, VT_VC_STAR, VB_VC_STAR, m );
        VT = VT_VC_STAR;
        MakeZeros( VB );
    }

    // Backtransform U and V
    bidiag::ApplyU( LEFT, NORMAL, B, tQ, A );
    bidiag::ApplyV( LEFT, NORMAL, B, tP, V );

    // Copy out the appropriate subset of the singular values
    s = d_STAR_STAR;
}
コード例 #20
0
ファイル: LU.hpp プロジェクト: ahmadia/Elemental-1
inline void
LU( DistMatrix<F>& A )
{
#ifndef RELEASE
    CallStackEntry entry("LU");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F>
        ATL(g), ATR(g),  A00(g), A01(g), A02(g), 
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),  
                         A20(g), A21(g), A22(g);

    // Temporary distributions
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,MC,  STAR> A21_MC_STAR(g);
    DistMatrix<F,STAR,VR  > A12_STAR_VR(g);
    DistMatrix<F,STAR,MR  > A12_STAR_MR(g);

    // Start the algorithm
    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    while( ATL.Height() < A.Height() && ATL.Width() < A.Width() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        A12_STAR_VR.AlignWith( A22 );
        A12_STAR_MR.AlignWith( A22 );
        A21_MC_STAR.AlignWith( A22 );
        A11_STAR_STAR.ResizeTo( A11.Height(), A11.Width() );
        //--------------------------------------------------------------------//
        A11_STAR_STAR = A11;
        LocalLU( A11_STAR_STAR );
        A11 = A11_STAR_STAR;

        A21_MC_STAR = A21;
        LocalTrsm
        ( RIGHT, UPPER, NORMAL, NON_UNIT, F(1), A11_STAR_STAR, A21_MC_STAR );
        A21 = A21_MC_STAR;

        // Perhaps we should give up perfectly distributing this operation since
        // it's total contribution is only O(n^2)
        A12_STAR_VR = A12;
        LocalTrsm
        ( LEFT, LOWER, NORMAL, UNIT, F(1), A11_STAR_STAR, A12_STAR_VR );

        A12_STAR_MR = A12_STAR_VR;
        LocalGemm( NORMAL, NORMAL, F(-1), A21_MC_STAR, A12_STAR_MR, F(1), A22 );
        A12 = A12_STAR_MR;
        //--------------------------------------------------------------------//
        A12_STAR_VR.FreeAlignments();
        A12_STAR_MR.FreeAlignments();
        A21_MC_STAR.FreeAlignments();

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );
    }
}
コード例 #21
0
ファイル: Ger.hpp プロジェクト: khalid-hasanov/Elemental
inline void
Ger
( T alpha, const DistMatrix<T>& x,
  const DistMatrix<T>& y,
  DistMatrix<T>& A )
{
#ifndef RELEASE
    CallStackEntry entry("Ger");
    if( A.Grid() != x.Grid() || x.Grid() != y.Grid() )
        LogicError
        ("{A,x,y} must be distributed over the same grid");
    if( ( x.Width() != 1 && x.Height() != 1 ) ||
            ( y.Width() != 1 && y.Height() != 1 )   )
        LogicError("x and y are assumed to be vectors");
    const Int xLength = ( x.Width()==1 ? x.Height() : x.Width() );
    const Int yLength = ( y.Width()==1 ? y.Height() : y.Width() );
    if( A.Height() != xLength || A.Width() != yLength )
    {
        std::ostringstream msg;
        msg << "Nonconformal Ger: \n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  x ~ " << x.Height() << " x " << x.Width() << "\n"
            << "  y ~ " << y.Height() << " x " << y.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();
    if( x.Width() == 1 && y.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,MC,STAR> x_MC_STAR(g);
        DistMatrix<T,MR,STAR> y_MR_STAR(g);

        // Begin the algoritm
        x_MC_STAR.AlignWith( A );
        y_MR_STAR.AlignWith( A );
        //--------------------------------------------------------------------//
        x_MC_STAR = x;
        y_MR_STAR = y;
        Ger
        ( alpha, x_MC_STAR.LockedMatrix(),
          y_MR_STAR.LockedMatrix(),
          A.Matrix() );
        //--------------------------------------------------------------------//
    }
    else if( x.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,MC,  STAR> x_MC_STAR(g);
        DistMatrix<T,STAR,MR  > y_STAR_MR(g);

        // Begin the algorithm
        x_MC_STAR.AlignWith( A );
        y_STAR_MR.AlignWith( A );
        //--------------------------------------------------------------------//
        x_MC_STAR = x;
        y_STAR_MR = y;
        Ger
        ( alpha, x_MC_STAR.LockedMatrix(),
          y_STAR_MR.LockedMatrix(),
          A.Matrix() );
        //--------------------------------------------------------------------//
    }
    else if( y.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,STAR,MC  > x_STAR_MC(g);
        DistMatrix<T,MR,  STAR> y_MR_STAR(g);

        // Begin the algorithm
        x_STAR_MC.AlignWith( A );
        y_MR_STAR.AlignWith( A );
        //--------------------------------------------------------------------//
        x_STAR_MC = x;
        y_MR_STAR = y;
        Ger
        ( alpha, x_STAR_MC.LockedMatrix(),
          y_MR_STAR.LockedMatrix(),
          A.Matrix() );
        //--------------------------------------------------------------------//
    }
    else
    {
        // Temporary distributions
        DistMatrix<T,STAR,MC> x_STAR_MC(g);
        DistMatrix<T,STAR,MR> y_STAR_MR(g);

        // Begin the algorithm
        x_STAR_MC.AlignWith( A );
        y_STAR_MR.AlignWith( A );
        //--------------------------------------------------------------------//
        x_STAR_MC = x;
        y_STAR_MR = y;
        Ger
        ( alpha, x_STAR_MC.LockedMatrix(),
          y_STAR_MR.LockedMatrix(),
          A.Matrix() );
        //--------------------------------------------------------------------//
    }
}
コード例 #22
0
ファイル: Skeleton.cpp プロジェクト: ifzz/Elemental
int
main( int argc, char* argv[] )
{
    Environment env( argc, argv );

    try 
    {
        const Int m = Input("--height","height of matrix",20);
        const Int n = Input("--width","width of matrix",100);
        const Int r = Input("--rank","rank of matrix",5);
        const Int maxSteps = Input("--maxSteps","max # of steps of QR",10);
        const Real tol = Input("--tol","tolerance for ID",Real(-1));
        const bool print = Input("--print","print matrices?",false);
        ProcessInput();
        PrintInputReport();

        DistMatrix<C> U, V;
        Uniform( U, m, r );
        Uniform( V, n, r );
        DistMatrix<C> A;
        Gemm( NORMAL, ADJOINT, C(1), U, V, A );
        const Real frobA = FrobeniusNorm( A );
        if( print )
            Print( A, "A" );

        const Grid& g = A.Grid();
        QRCtrl<Real> ctrl;
        ctrl.boundRank = true;
        ctrl.maxRank = maxSteps;
        if( tol != Real(-1) )
        {
            ctrl.adaptive = true;
            ctrl.tol = tol;
        }
        DistPermutation PR(g), PC(g);
        DistMatrix<C> Z(g);
        Timer timer;
        if( mpi::Rank() == 0 )
            timer.Start();
        Skeleton( A, PR, PC, Z, ctrl );
        if( mpi::Rank() == 0 )
            timer.Stop();
        const Int rank = Z.Height();
        if( print )
        {
            DistMatrix<Int> PFull(g);
            PR.ExplicitMatrix( PFull );
            Print( PFull, "PR" );
            PC.ExplicitMatrix( PFull );
            Print( PFull, "PC" );
            Print( Z, "Z" );
        }

        // Form the matrices of A's (hopefully) dominant rows and columns
        DistMatrix<C> AR( A );
        PR.PermuteRows( AR );
        AR.Resize( rank, A.Width() );
        DistMatrix<C> AC( A );
        PC.PermuteCols( AC );
        AC.Resize( A.Height(), rank );
        if( print )
        {
            Print( AC, "A_C" );
            Print( AR, "A_R" );
        }

        // Check || A - AC Z AR ||_F / || A ||_F
        DistMatrix<C> B(g);
        Gemm( NORMAL, NORMAL, C(1), Z, AR, B );
        Gemm( NORMAL, NORMAL, C(-1), AC, B, C(1), A );
        const Real frobError = FrobeniusNorm( A );
        if( print )
            Print( A, "A - A_C Z A_R" );

        if( mpi::Rank() == 0 )
        {
            Output("Skeleton time: ",timer.Total()," secs");
            Output
            ("|| A ||_F = ",frobA,"\n",
             "|| A - A_C Z A_R ||_F / || A ||_F = ",frobError/frobA);
        }
    }
    catch( exception& e ) { ReportException(e); }

    return 0;
}
コード例 #23
0
ファイル: LSquare.hpp プロジェクト: ahmadia/Elemental-1
void LSquare
( DistMatrix<Complex<R> >& A,
  DistMatrix<Complex<R>,STAR,STAR>& t )
{
#ifndef RELEASE
    CallStackEntry entry("hermitian_tridiag::LSquare");
    if( A.Grid() != t.Grid() )
        throw std::logic_error("{A,t} must be distributed over the same grid");
#endif
    const Grid& g = A.Grid();
#ifndef RELEASE
    if( g.Height() != g.Width() )
        throw std::logic_error("The process grid must be square");
    if( A.Height() != A.Width() )
        throw std::logic_error("A must be square");
    if( t.Viewing() )
        throw std::logic_error("t must not be a view");
#endif
    typedef Complex<R> C;

    DistMatrix<C,MD,STAR> tDiag(g);
    tDiag.AlignWithDiagonal( A, -1 );
    tDiag.ResizeTo( A.Height()-1, 1 );

    // Matrix views 
    DistMatrix<C> 
        ATL(g), ATR(g),  A00(g), A01(g), A02(g), 
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);
    DistMatrix<C,MD,STAR> tT(g),  t0(g), 
                          tB(g),  t1(g),
                                  t2(g);

    // Temporary distributions
    DistMatrix<C> WPan(g);
    DistMatrix<C,STAR,STAR> t1_STAR_STAR(g);
    DistMatrix<C,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<C,MC,  STAR> APan_MC_STAR(g),  A11_MC_STAR(g),
                                              A21_MC_STAR(g);
    DistMatrix<C,MR,  STAR> APan_MR_STAR(g),  A11_MR_STAR(g),
                                              A21_MR_STAR(g);
    DistMatrix<C,MC,  STAR> WPan_MC_STAR(g),  W11_MC_STAR(g),
                                              W21_MC_STAR(g);
    DistMatrix<C,MR,  STAR> WPan_MR_STAR(g),  W11_MR_STAR(g),
                                              W21_MR_STAR(g);

    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    PartitionDown
    ( tDiag, tT,
             tB, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        RepartitionDown
        ( tT,  t0,
         /**/ /**/
               t1,
          tB,  t2 );
            
        if( A22.Height() > 0 )
        {
            WPan.AlignWith( A11 );
            APan_MC_STAR.AlignWith( A11 );
            WPan_MC_STAR.AlignWith( A11 );
            APan_MR_STAR.AlignWith( A11 );
            WPan_MR_STAR.AlignWith( A11 );
            //----------------------------------------------------------------//
            WPan.ResizeTo( ABR.Height(), A11.Width() );
            APan_MC_STAR.ResizeTo( ABR.Height(), A11.Width() );
            WPan_MC_STAR.ResizeTo( ABR.Height(), A11.Width() );
            APan_MR_STAR.ResizeTo( ABR.Height(), A11.Width() );
            WPan_MR_STAR.ResizeTo( ABR.Height(), A11.Width() );

            hermitian_tridiag::PanelLSquare
            ( ABR, WPan, t1,
              APan_MC_STAR, APan_MR_STAR, WPan_MC_STAR, WPan_MR_STAR );

            PartitionDown
            ( APan_MC_STAR, A11_MC_STAR,
                            A21_MC_STAR, A11.Height() );
            PartitionDown
            ( APan_MR_STAR, A11_MR_STAR,
                            A21_MR_STAR, A11.Height() );
            PartitionDown
            ( WPan_MC_STAR, W11_MC_STAR,
                            W21_MC_STAR, A11.Height() );
            PartitionDown
            ( WPan_MR_STAR, W11_MR_STAR,
                            W21_MR_STAR, A11.Height() );

            LocalTrr2k
            ( LOWER, ADJOINT, ADJOINT,
              C(-1), A21_MC_STAR, W21_MR_STAR,
                     W21_MC_STAR, A21_MR_STAR,
              C(1), A22 );
            //----------------------------------------------------------------//
            WPan_MR_STAR.FreeAlignments();
            APan_MR_STAR.FreeAlignments();
            WPan_MC_STAR.FreeAlignments();
            APan_MC_STAR.FreeAlignments();
            WPan.FreeAlignments();
        }
        else
        {
            A11_STAR_STAR = A11;
            t1_STAR_STAR.ResizeTo( t1.Height(), 1 );

            HermitianTridiag
            ( LOWER, A11_STAR_STAR.Matrix(), t1_STAR_STAR.Matrix() );

            A11 = A11_STAR_STAR;
            t1 = t1_STAR_STAR;
        }

        SlidePartitionDown
        ( tT,  t0,
               t1,
         /**/ /**/
          tB,  t2 );

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );
    }

    // Redistribute from matrix-diagonal form to fully replicated
    t = tDiag;
}
コード例 #24
0
ファイル: LVar4.hpp プロジェクト: khalid-hasanov/Elemental
inline void
TwoSidedTrmmLVar4
( UnitOrNonUnit diag, DistMatrix<F>& A, const DistMatrix<F>& L )
{
#ifndef RELEASE
    CallStackEntry entry("internal::TwoSidedTrmmLVar4");
    if( A.Height() != A.Width() )
        LogicError("A must be square");
    if( L.Height() != L.Width() )
        LogicError("Triangular matrices must be square");
    if( A.Height() != L.Height() )
        LogicError("A and L must be the same size");
#endif
    const Grid& g = A.Grid();

    // Matrix views
    DistMatrix<F>
        ATL(g), ATR(g),  A00(g), A01(g), A02(g),
        ABL(g), ABR(g),  A10(g), A11(g), A12(g),
                         A20(g), A21(g), A22(g);
    DistMatrix<F>
        LTL(g), LTR(g),  L00(g), L01(g), L02(g),
        LBL(g), LBR(g),  L10(g), L11(g), L12(g),
                         L20(g), L21(g), L22(g);

    // Temporary distributions
    DistMatrix<F,STAR,VR  > A10_STAR_VR(g);
    DistMatrix<F,STAR,MR  > A10_STAR_MR(g);
    DistMatrix<F,STAR,MC  > A10_STAR_MC(g);
    DistMatrix<F,STAR,STAR> A11_STAR_STAR(g);
    DistMatrix<F,VC,  STAR> A21_VC_STAR(g);
    DistMatrix<F,MC,  STAR> A21_MC_STAR(g);
    DistMatrix<F,STAR,VR  > L10_STAR_VR(g);
    DistMatrix<F,MR,  STAR> L10Adj_MR_STAR(g);
    DistMatrix<F,STAR,MC  > L10_STAR_MC(g);
    DistMatrix<F,STAR,STAR> L11_STAR_STAR(g);
    DistMatrix<F,STAR,VR  > Y10_STAR_VR(g);

    PartitionDownDiagonal
    ( A, ATL, ATR,
         ABL, ABR, 0 );
    LockedPartitionDownDiagonal
    ( L, LTL, LTR,
         LBL, LBR, 0 );
    while( ATL.Height() < A.Height() )
    {
        RepartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, /**/ A01, A02,
         /*************/ /******************/
               /**/       A10, /**/ A11, A12,
          ABL, /**/ ABR,  A20, /**/ A21, A22 );

        LockedRepartitionDownDiagonal
        ( LTL, /**/ LTR,  L00, /**/ L01, L02,
         /*************/ /******************/
               /**/       L10, /**/ L11, L12,
          LBL, /**/ LBR,  L20, /**/ L21, L22 );

        A10_STAR_VR.AlignWith( A00 );
        A10_STAR_MR.AlignWith( A00 );
        A10_STAR_MC.AlignWith( A00 );
        A21_MC_STAR.AlignWith( A20 );
        L10_STAR_VR.AlignWith( A00 );
        L10Adj_MR_STAR.AlignWith( A00 );
        L10_STAR_MC.AlignWith( A00 );
        Y10_STAR_VR.AlignWith( A10 );
        //--------------------------------------------------------------------//
        // Y10 := A11 L10
        A11_STAR_STAR = A11;
        L10Adj_MR_STAR.AdjointFrom( L10 );
        L10_STAR_VR.AdjointFrom( L10Adj_MR_STAR );
        Zeros( Y10_STAR_VR, A10.Height(), A10.Width() );
        Hemm
        ( LEFT, LOWER,
          F(1), A11_STAR_STAR.LockedMatrix(), L10_STAR_VR.LockedMatrix(),
          F(0), Y10_STAR_VR.Matrix() );

        // A10 := A10 + 1/2 Y10
        A10_STAR_VR = A10;
        Axpy( F(1)/F(2), Y10_STAR_VR, A10_STAR_VR );

        // A00 := A00 + (A10' L10 + L10' A10)
        A10_STAR_MR = A10_STAR_VR;
        A10_STAR_MC = A10_STAR_VR;
        L10_STAR_MC = L10_STAR_VR;
        LocalTrr2k
        ( LOWER, ADJOINT, ADJOINT, ADJOINT,
          F(1), A10_STAR_MC, L10Adj_MR_STAR, 
                L10_STAR_MC, A10_STAR_MR, 
          F(1), A00 );

        // A10 := A10 + 1/2 Y10
        Axpy( F(1)/F(2), Y10_STAR_VR, A10_STAR_VR );

        // A10 := L11' A10
        L11_STAR_STAR = L11;
        LocalTrmm
        ( LEFT, LOWER, ADJOINT, diag, F(1), L11_STAR_STAR, A10_STAR_VR );
        A10 = A10_STAR_VR;

        // A20 := A20 + A21 L10
        A21_MC_STAR = A21;
        LocalGemm
        ( NORMAL, ADJOINT, F(1), A21_MC_STAR, L10Adj_MR_STAR, F(1), A20 );

        // A11 := L11' A11 L11
        LocalTwoSidedTrmm( LOWER, diag, A11_STAR_STAR, L11_STAR_STAR );
        A11 = A11_STAR_STAR;

        // A21 := A21 L11
        A21_VC_STAR = A21_MC_STAR;
        LocalTrmm
        ( RIGHT, LOWER, NORMAL, diag, F(1), L11_STAR_STAR, A21_VC_STAR );
        A21 = A21_VC_STAR;
        //--------------------------------------------------------------------//

        SlidePartitionDownDiagonal
        ( ATL, /**/ ATR,  A00, A01, /**/ A02,
               /**/       A10, A11, /**/ A12,
         /*************/ /******************/
          ABL, /**/ ABR,  A20, A21, /**/ A22 );

        SlideLockedPartitionDownDiagonal
        ( LTL, /**/ LTR,  L00, L01, /**/ L02,
               /**/       L10, L11, /**/ L12,
         /*************/ /******************/
          LBL, /**/ LBR,  L20, L21, /**/ L22 );
    }
}
コード例 #25
0
ファイル: AllGather.cpp プロジェクト: bluehope/Elemental
void AllGather
( const DistMatrix<T,        U,           V   >& A, 
        DistMatrix<T,Collect<U>(),Collect<V>()>& B ) 
{
    DEBUG_ONLY(CSE cse("copy::AllGather"))
    AssertSameGrids( A, B );

    const Int height = A.Height();
    const Int width = A.Width();
    B.SetGrid( A.Grid() );
    B.Resize( height, width );

    if( A.Participating() )
    {
        const Int colStride = A.ColStride();
        const Int rowStride = A.RowStride();
        const Int distStride = colStride*rowStride;
        const Int maxLocalHeight = MaxLength(height,colStride);
        const Int maxLocalWidth = MaxLength(width,rowStride);
        const Int portionSize = mpi::Pad( maxLocalHeight*maxLocalWidth );
        vector<T> buf( (distStride+1)*portionSize );
        T* sendBuf = &buf[0];
        T* recvBuf = &buf[portionSize];

        // Pack
        util::InterleaveMatrix
        ( A.LocalHeight(), A.LocalWidth(),
          A.LockedBuffer(), 1, A.LDim(),
          sendBuf,          1, A.LocalHeight() );

        // Communicate
        mpi::AllGather
        ( sendBuf, portionSize, recvBuf, portionSize, A.DistComm() );

        // Unpack
        util::StridedUnpack
        ( height, width,
          A.ColAlign(), colStride,
          A.RowAlign(), rowStride,
          recvBuf, portionSize,
          B.Buffer(), B.LDim() );
    }
    if( A.Grid().InGrid() && A.CrossComm() != mpi::COMM_SELF )
    {
        // Pack from the root
        const Int BLocalHeight = B.LocalHeight();
        const Int BLocalWidth = B.LocalWidth();
        vector<T> buf(BLocalHeight*BLocalWidth);
        if( A.CrossRank() == A.Root() )
            util::InterleaveMatrix
            ( BLocalHeight, BLocalWidth,
              B.LockedBuffer(), 1, B.LDim(),
              buf.data(),       1, BLocalHeight ); 

        // Broadcast from the root
        mpi::Broadcast
        ( buf.data(), BLocalHeight*BLocalWidth, A.Root(), A.CrossComm() );

        // Unpack if not the root
        if( A.CrossRank() != A.Root() )
            util::InterleaveMatrix
            ( BLocalHeight, BLocalWidth,
              buf.data(), 1, BLocalHeight,
              B.Buffer(), 1, B.LDim() );
    }
}
コード例 #26
0
ファイル: UT.hpp プロジェクト: khalid-hasanov/Elemental
inline void
Syr2kUT
( T alpha, const DistMatrix<T>& A, const DistMatrix<T>& B,
  T beta,        DistMatrix<T>& C,
  bool conjugate=false )
{
#ifndef RELEASE
    CallStackEntry entry("internal::Syr2kUT");
    if( A.Grid() != B.Grid() || B.Grid() != C.Grid() )
        LogicError("{A,B,C} must be distributed over the same grid");
    if( A.Width() != C.Height() || 
        A.Width() != C.Width()  ||
        B.Width() != C.Height() ||
        B.Width() != C.Width()  ||
        A.Height() != B.Height()  )
    {
        std::ostringstream msg;
        msg << "Nonconformal Syr2kUT:\n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  B ~ " << B.Height() << " x " << B.Width() << "\n"
            << "  C ~ " << C.Height() << " x " << C.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();
    const Orientation orientation = ( conjugate ? ADJOINT : TRANSPOSE );

    // Matrix views
    DistMatrix<T> AT(g),  A0(g),
                  AB(g),  A1(g),
                          A2(g);
    DistMatrix<T> BT(g),  B0(g),
                  BB(g),  B1(g),
                          B2(g);

    // Temporary distributions
    DistMatrix<T,MR,  STAR> A1Trans_MR_STAR(g);
    DistMatrix<T,MR,  STAR> B1Trans_MR_STAR(g);
    DistMatrix<T,STAR,VR  > A1_STAR_VR(g);
    DistMatrix<T,STAR,VR  > B1_STAR_VR(g);
    DistMatrix<T,STAR,MC  > A1_STAR_MC(g);
    DistMatrix<T,STAR,MC  > B1_STAR_MC(g);

    A1Trans_MR_STAR.AlignWith( C );
    B1Trans_MR_STAR.AlignWith( C );
    A1_STAR_MC.AlignWith( C );
    B1_STAR_MC.AlignWith( C );

    // Start the algorithm
    ScaleTrapezoid( beta, UPPER, C );
    LockedPartitionDown
    ( A, AT, 
         AB, 0 );
    LockedPartitionDown
    ( B, BT,
         BB, 0 );
    while( AB.Height() > 0 )
    {
        LockedRepartitionDown
        ( AT,  A0,
         /**/ /**/
               A1,
          AB,  A2 );

        LockedRepartitionDown
        ( BT,  B0,
         /**/ /**/
               B1,
          BB,  B2 );

        //--------------------------------------------------------------------//
        A1Trans_MR_STAR.TransposeFrom( A1 );
        A1_STAR_VR.TransposeFrom( A1Trans_MR_STAR );
        A1_STAR_MC = A1_STAR_VR;

        B1Trans_MR_STAR.TransposeFrom( B1 );
        B1_STAR_VR.TransposeFrom( B1Trans_MR_STAR );
        B1_STAR_MC = B1_STAR_VR;

        LocalTrr2k
        ( UPPER, orientation, TRANSPOSE, orientation, TRANSPOSE, 
          alpha, A1_STAR_MC, B1Trans_MR_STAR,
                 B1_STAR_MC, A1Trans_MR_STAR,
          T(1),  C );
        //--------------------------------------------------------------------//

        SlideLockedPartitionDown
        ( AT,  A0,
               A1,
         /**/ /**/
          AB,  A2 );

        SlideLockedPartitionDown
        ( BT,  B0,
               B1,
         /**/ /**/
          BB,  B2 );
    }
}
コード例 #27
0
ファイル: UVar3.hpp プロジェクト: ahmadia/Elemental-1
inline void
UVar3( UnitOrNonUnit diag, DistMatrix<F>& U )
{
#ifndef RELEASE
    CallStackEntry entry("triangular_inverse::UVar3");
    if( U.Height() != U.Width() )
        throw std::logic_error("Nonsquare matrices cannot be triangular");
#endif
    const Grid& g = U.Grid();

    // Matrix views
    DistMatrix<F> 
        UTL(g), UTR(g),  U00(g), U01(g), U02(g),
        UBL(g), UBR(g),  U10(g), U11(g), U12(g),
                         U20(g), U21(g), U22(g);

    // Temporary distributions
    DistMatrix<F,VC,  STAR> U01_VC_STAR(g);
    DistMatrix<F,STAR,STAR> U11_STAR_STAR(g);
    DistMatrix<F,STAR,VR  > U12_STAR_VR(g);
    DistMatrix<F,STAR,MC  > U01Trans_STAR_MC(g);
    DistMatrix<F,MR,  STAR> U12Trans_MR_STAR(g);

    // Start the algorithm
    PartitionUpDiagonal
    ( U, UTL, UTR,
         UBL, UBR, 0 );
    while( UBR.Height() < U.Height() )
    {
        RepartitionUpDiagonal
        ( UTL, /**/ UTR,  U00, U01, /**/ U02,
               /**/       U10, U11, /**/ U12,
         /*************/ /******************/
          UBL, /**/ UBR,  U20, U21, /**/ U22 );

        U01Trans_STAR_MC.AlignWith( U02 );
        U12Trans_MR_STAR.AlignWith( U02 );
        //--------------------------------------------------------------------//
        U01_VC_STAR = U01;
        U11_STAR_STAR = U11;
        LocalTrsm
        ( RIGHT, UPPER, NORMAL, diag, F(-1), U11_STAR_STAR, U01_VC_STAR );

        // We transpose before the communication to avoid cache-thrashing
        // in the unpacking stage.
        U12Trans_MR_STAR.TransposeFrom( U12 );
        U01Trans_STAR_MC.TransposeFrom( U01_VC_STAR );

        LocalGemm
        ( TRANSPOSE, TRANSPOSE, 
          F(1), U01Trans_STAR_MC, U12Trans_MR_STAR, F(1), U02 );
        U01.TransposeFrom( U01Trans_STAR_MC );

        U12_STAR_VR.TransposeFrom( U12Trans_MR_STAR );
        LocalTrsm
        ( LEFT, UPPER, NORMAL, diag, F(1), U11_STAR_STAR, U12_STAR_VR );
        LocalTriangularInverse( UPPER, diag, U11_STAR_STAR );
        U11 = U11_STAR_STAR;
        U12 = U12_STAR_VR;
        //--------------------------------------------------------------------//
        U01Trans_STAR_MC.FreeAlignments();
        U12Trans_MR_STAR.FreeAlignments();

        SlidePartitionUpDiagonal
        ( UTL, /**/ UTR,  U00, /**/ U01, U02,
         /*************/ /******************/
               /**/       U10, /**/ U11, U12,
          UBL, /**/ UBR,  U20, /**/ U21, U22 );
    }
}
コード例 #28
0
ファイル: Symv.hpp プロジェクト: khalid-hasanov/Elemental
inline void
Symv
( UpperOrLower uplo,
  T alpha, const DistMatrix<T>& A,
           const DistMatrix<T>& x,
  T beta,        DistMatrix<T>& y,
  bool conjugate=false )
{
#ifndef RELEASE
    CallStackEntry entry("Symv");
    if( A.Grid() != x.Grid() || x.Grid() != y.Grid() )
        LogicError
        ("{A,x,y} must be distributed over the same grid");
    if( A.Height() != A.Width() )
        LogicError("A must be square");
    if( ( x.Width() != 1 && x.Height() != 1 ) ||
        ( y.Width() != 1 && y.Height() != 1 ) )
        LogicError("x and y are assumed to be vectors");
    const Int xLength = ( x.Width()==1 ? x.Height() : x.Width() );
    const Int yLength = ( y.Width()==1 ? y.Height() : y.Width() );
    if( A.Height() != xLength || A.Height() != yLength )
    {
        std::ostringstream msg;
        msg << "Nonconformal Symv: \n"
            << "  A ~ " << A.Height() << " x " << A.Width() << "\n"
            << "  x ~ " << x.Height() << " x " << x.Width() << "\n"
            << "  y ~ " << y.Height() << " x " << y.Width() << "\n";
        LogicError( msg.str() );
    }
#endif
    const Grid& g = A.Grid();

    if( x.Width() == 1 && y.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,MC,STAR> x_MC_STAR(g), z_MC_STAR(g);
        DistMatrix<T,MR,STAR> x_MR_STAR(g), z_MR_STAR(g);
        DistMatrix<T,MR,MC  > z_MR_MC(g);
        DistMatrix<T> z(g);

        // Begin the algoritm
        Scale( beta, y );
        x_MC_STAR.AlignWith( A );
        x_MR_STAR.AlignWith( A );
        z_MC_STAR.AlignWith( A );
        z_MR_STAR.AlignWith( A );
        z.AlignWith( y );
        Zeros( z_MC_STAR, y.Height(), 1 );
        Zeros( z_MR_STAR, y.Height(), 1 );
        //--------------------------------------------------------------------//
        x_MC_STAR = x;
        x_MR_STAR = x_MC_STAR;
        if( uplo == LOWER )
        {
            internal::LocalSymvColAccumulateL
            ( alpha, A, x_MC_STAR, x_MR_STAR, z_MC_STAR, z_MR_STAR, conjugate );
        }
        else
        {
            internal::LocalSymvColAccumulateU
            ( alpha, A, x_MC_STAR, x_MR_STAR, z_MC_STAR, z_MR_STAR, conjugate );
        }

        z_MR_MC.SumScatterFrom( z_MR_STAR );
        z = z_MR_MC;
        z.SumScatterUpdate( T(1), z_MC_STAR );
        Axpy( T(1), z, y );
        //--------------------------------------------------------------------//
    }
    else if( x.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,MC,STAR> x_MC_STAR(g), z_MC_STAR(g);
        DistMatrix<T,MR,STAR> x_MR_STAR(g), z_MR_STAR(g);
        DistMatrix<T,MR,MC  > z_MR_MC(g);
        DistMatrix<T> z(g), zTrans(g);

        // Begin the algoritm
        Scale( beta, y );
        x_MC_STAR.AlignWith( A );
        x_MR_STAR.AlignWith( A );
        z_MC_STAR.AlignWith( A );
        z_MR_STAR.AlignWith( A );
        z.AlignWith( y );
        z_MR_MC.AlignWith( y );
        Zeros( z_MC_STAR, y.Width(), 1 );
        Zeros( z_MR_STAR, y.Width(), 1 );
        //--------------------------------------------------------------------//
        x_MC_STAR = x;
        x_MR_STAR = x_MC_STAR;
        if( uplo == LOWER )
        {
            internal::LocalSymvColAccumulateL
            ( alpha, A, x_MC_STAR, x_MR_STAR, z_MC_STAR, z_MR_STAR, conjugate );
        }
        else
        {
            internal::LocalSymvColAccumulateU
            ( alpha, A, x_MC_STAR, x_MR_STAR, z_MC_STAR, z_MR_STAR, conjugate );
        }

        z.SumScatterFrom( z_MC_STAR );
        z_MR_MC = z;
        z_MR_MC.SumScatterUpdate( T(1), z_MR_STAR );
        Transpose( z_MR_MC, zTrans );
        Axpy( T(1), zTrans, y );
        //--------------------------------------------------------------------//
    }
    else if( y.Width() == 1 )
    {
        // Temporary distributions
        DistMatrix<T,STAR,MC> x_STAR_MC(g), z_STAR_MC(g);
        DistMatrix<T,STAR,MR> x_STAR_MR(g), z_STAR_MR(g);
        DistMatrix<T,MR,  MC> z_MR_MC(g);
        DistMatrix<T> z(g), zTrans(g);

        // Begin the algoritm
        Scale( beta, y );
        x_STAR_MC.AlignWith( A );
        x_STAR_MR.AlignWith( A );
        z_STAR_MC.AlignWith( A );
        z_STAR_MR.AlignWith( A );
        z.AlignWith( y );
        z_MR_MC.AlignWith( y );
        Zeros( z_STAR_MC, 1, y.Height() );
        Zeros( z_STAR_MR, 1, y.Height() );
        //--------------------------------------------------------------------//
        x_STAR_MR = x;
        x_STAR_MC = x_STAR_MR;
        if( uplo == LOWER )
        {
            internal::LocalSymvRowAccumulateL
            ( alpha, A, x_STAR_MC, x_STAR_MR, z_STAR_MC, z_STAR_MR, conjugate );
        }
        else
        {
            internal::LocalSymvRowAccumulateU
            ( alpha, A, x_STAR_MC, x_STAR_MR, z_STAR_MC, z_STAR_MR, conjugate );
        }

        z.SumScatterFrom( z_STAR_MR );
        z_MR_MC = z;
        z_MR_MC.SumScatterUpdate( T(1), z_STAR_MC );
        Transpose( z_MR_MC, zTrans );
        Axpy( T(1), zTrans, y );
        //--------------------------------------------------------------------//
    }
    else
    {
        // Temporary distributions
        DistMatrix<T,STAR,MC> x_STAR_MC(g), z_STAR_MC(g);
        DistMatrix<T,STAR,MR> x_STAR_MR(g), z_STAR_MR(g);
        DistMatrix<T,MR,  MC> z_MR_MC(g);
        DistMatrix<T> z(g);

        // Begin the algoritm
        Scale( beta, y );
        x_STAR_MC.AlignWith( A );
        x_STAR_MR.AlignWith( A );
        z_STAR_MC.AlignWith( A );
        z_STAR_MR.AlignWith( A );
        z.AlignWith( y );
        z_MR_MC.AlignWith( y );
        Zeros( z_STAR_MC, 1, y.Width() );
        Zeros( z_STAR_MR, 1, y.Width() );
        //--------------------------------------------------------------------//
        x_STAR_MR = x;
        x_STAR_MC = x_STAR_MR;
        if( uplo == LOWER )
        {
            internal::LocalSymvRowAccumulateL
            ( alpha, A, x_STAR_MC, x_STAR_MR, z_STAR_MC, z_STAR_MR, conjugate );
        }
        else
        {
            internal::LocalSymvRowAccumulateU
            ( alpha, A, x_STAR_MC, x_STAR_MR, z_STAR_MC, z_STAR_MR, conjugate );
        }

        z_MR_MC.SumScatterFrom( z_STAR_MC );
        z = z_MR_MC;
        z.SumScatterUpdate( T(1), z_STAR_MR );
        Axpy( T(1), z, y );
        //--------------------------------------------------------------------//
    }
}
コード例 #29
0
ファイル: Skeleton.cpp プロジェクト: SamKChang/madness
int
main( int argc, char* argv[] )
{
    Initialize( argc, argv );

    try 
    {
        const Int m = Input("--height","height of matrix",20);
        const Int n = Input("--width","width of matrix",100);
        const Int r = Input("--rank","rank of matrix",5);
        const Int maxSteps = Input("--maxSteps","max # of steps of QR",10);
        const double tol = Input("--tol","tolerance for ID",-1.);
        const bool print = Input("--print","print matrices?",false);
        ProcessInput();
        PrintInputReport();

        DistMatrix<C> U, V;
        Uniform( U, m, r );
        Uniform( V, n, r );
        DistMatrix<C> A;
        Gemm( NORMAL, ADJOINT, C(1), U, V, A );
        const Real frobA = FrobeniusNorm( A );
        if( print )
            Print( A, "A" );

        const Grid& g = A.Grid();
        DistMatrix<Int,VR,STAR> permR(g), permC(g);
        DistMatrix<C> Z(g);
        Skeleton( A, permR, permC, Z, maxSteps, tol );
        const Int rank = Z.Height();
        if( print )
        {
            Print( permR, "permR" );
            Print( permC, "permC" );
            Print( Z, "Z" );
        }

        // Form the matrices of A's (hopefully) dominant rows and columns
        DistMatrix<C> AR( A );
        InversePermuteRows( AR, permR );
        AR.Resize( rank, A.Width() );
        DistMatrix<C> AC( A );
        InversePermuteCols( AC, permC );
        AC.Resize( A.Height(), rank );
        if( print )
        {
            Print( AC, "AC" );
            Print( AR, "AR" );
        }

        // Check || A - AC Z AR ||_F / || A ||_F
        DistMatrix<C> B(g);
        Gemm( NORMAL, NORMAL, C(1), Z, AR, B );
        Gemm( NORMAL, NORMAL, C(-1), AC, B, C(1), A );
        const Real frobError = FrobeniusNorm( A );
        if( print )
            Print( A, "A - AC Z AR" );

        if( mpi::WorldRank() == 0 )
        {
            std::cout << "|| A ||_F = " << frobA << "\n\n"
                      << "|| A - AC Z AR ||_F / || A ||_F = " 
                      << frobError/frobA << "\n" << std::endl;
        }
    }
    catch( exception& e ) { ReportException(e); }

    Finalize();
    return 0;
}
コード例 #30
0
ファイル: NTTN.hpp プロジェクト: khalid-hasanov/Elemental
void Trr2kNTTN
( UpperOrLower uplo,
  Orientation orientationOfB, Orientation orientationOfC,
  T alpha, const DistMatrix<T>& A, const DistMatrix<T>& B,
           const DistMatrix<T>& C, const DistMatrix<T>& D,
  T beta,        DistMatrix<T>& E )
{
#ifndef RELEASE
    CallStackEntry entry("internal::Trr2kNTTN");
    if( E.Height() != E.Width()  || A.Width()  != C.Height() ||
        A.Height() != E.Height() || C.Width()  != E.Height() ||
        B.Height() != E.Width()  || D.Width()  != E.Width()  ||
        A.Width()  != B.Width()  || C.Height() != D.Height() )
        LogicError("Nonconformal Trr2kNTTN");
#endif
    const Grid& g = E.Grid();

    DistMatrix<T> AL(g), AR(g),
                  A0(g), A1(g), A2(g);
    DistMatrix<T> BL(g), BR(g),
                  B0(g), B1(g), B2(g);

    DistMatrix<T> CT(g),  C0(g),
                  CB(g),  C1(g),
                          C2(g);
    DistMatrix<T> DT(g),  D0(g),
                  DB(g),  D1(g),
                          D2(g);

    DistMatrix<T,MC,  STAR> A1_MC_STAR(g);
    DistMatrix<T,VR,  STAR> B1_VR_STAR(g);
    DistMatrix<T,STAR,MR  > B1AdjOrTrans_STAR_MR(g);
    DistMatrix<T,STAR,MC  > C1_STAR_MC(g);
    DistMatrix<T,MR,  STAR> D1Trans_MR_STAR(g);

    A1_MC_STAR.AlignWith( E );
    B1_VR_STAR.AlignWith( E );
    B1AdjOrTrans_STAR_MR.AlignWith( E );
    C1_STAR_MC.AlignWith( E );
    D1Trans_MR_STAR.AlignWith( E );

    LockedPartitionRight( A, AL, AR, 0 );
    LockedPartitionRight( B, BL, BR, 0 );
    LockedPartitionDown
    ( C, CT,
         CB, 0 );
    LockedPartitionDown
    ( D, DT,
         DB, 0 );
    while( AL.Width() < A.Width() )
    {
        LockedRepartitionRight
        ( AL, /**/ AR,
          A0, /**/ A1, A2 );
        LockedRepartitionRight
        ( BL, /**/ BR,
          B0, /**/ B1, B2 );
        LockedRepartitionDown
        ( CT,  C0,
         /**/ /**/
               C1,
          CB,  C2 );
        LockedRepartitionDown
        ( DT,  D0,
         /**/ /**/
               D1,
          DB,  D2 );

        //--------------------------------------------------------------------//
        A1_MC_STAR = A1;
        C1_STAR_MC = C1;
        B1_VR_STAR = B1;
        if( orientationOfB == ADJOINT )
            B1AdjOrTrans_STAR_MR.AdjointFrom( B1_VR_STAR );
        else
            B1AdjOrTrans_STAR_MR.TransposeFrom( B1_VR_STAR );
        D1Trans_MR_STAR.TransposeFrom( D1 );
        LocalTrr2k 
        ( uplo, orientationOfC, TRANSPOSE,
          alpha, A1_MC_STAR, B1AdjOrTrans_STAR_MR,
                 C1_STAR_MC, D1Trans_MR_STAR,
          beta,  E );
        //--------------------------------------------------------------------//

        SlideLockedPartitionRight
        ( AL,     /**/ AR,
          A0, A1, /**/ A2 );
        SlideLockedPartitionRight
        ( BL,     /**/ BR,
          B0, B1, /**/ B2 );
        SlideLockedPartitionDown
        ( CT,  C0,
               C1,
         /**/ /**/
          CB,  C2 );
        SlideLockedPartitionDown
        ( DT,  D0,
               D1,
         /**/ /**/
          DB,  D2 );
    }
}