Copyright (c) 2009-2015 EPAM Systems GNU General Public License version 3
This repository includes:
- Bingo: Chemistry search engine for Oracle, Microsoft SQL Server and PostgreSQL databases
- Indigo: Universal cheminformatics library, and the following tools:
- Legio: GUI application for combinatorial chemistry
- ChemDiff: Visual comparison of two SDF or SMILES files
- indigo-depict: Molecule and reaction rendering utility
- indigo-cano: Canonical SMILES generator
- indigo-deco: R-Group deconvolution utility
Detailed documentations is available at http://lifescience.opensource.epam.com
Main directory structure layout:
- api: Indigo API sources
- bingo: Bingo sources
- build_scripts: CMake and python scripts for building all the sources
- third_party: sources for third-party libraries
- utils: utilities sources
- common|graph|layout|molecule|reaction|render2d: indigo-core sources
Each project is placed in the corresponding directory with CMakeList.txt configuration file, that does not include other projects. In order to build the whole project with the correct references you need to use CMake configurations from the build_scripts directory.
All the cmake projects are placed in build_scripts directories. You can use them manually, or execute preconfigured scripts that does all the job.
To generate project configuration, build the source code, and create the archives for installation you need to execute build_scripts\bingo-release.py:
build_scripts\bingo-release.py --preset=linux32 --dbms=[postgres|oracle|sqlserver]
The are different cmake presets: linux32, linux64, win32, win64, mac10.5, mac10.6 (for 10.7 also)
To generate project configuration, build the source code, and create the archives for installation you need to execute build_scripts\bingo-release.py:
build_scripts\indigo-release-libs.py --preset=linux64
build_scripts\indigo-release-utils.py --preset=linux64
build_scripts\indigo-release-libs.py --preset=win64-2013
build_scripts\indigo-release-utils.py --preset=win64-2013
build_scripts\indigo-release-libs.py --preset=mac10.10
build_scripts\indigo-release-utils.py --preset=mac10.10
There are different cmake presets: win32-2013, win64-2013, win32-mingw, linux32, linux32-universal, linux64, linux64-universal, mac10.6, mac10.7, mac10.8, mac10.9, mac10.10, mac-universal
To generate Java, C#, or Python wrappers after build the binaries you need to execute
build_scripts\indigo-make-by-libs.py --type=java
Available types: java, dotnet, python