GitHub - haidark/HMMMSA: Multiple sequence alignments using HMMSTR (bystrc)

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
HMM_RV11		HMM_RV11
HMM_RV12		HMM_RV12
bb3_release		bb3_release
#hmmstr.f95#		#hmmstr.f95#
.gitignore		.gitignore
1-2-6-3-7.drct		1-2-6-3-7.drct
1-2-6-3-7.gca		1-2-6-3-7.gca
1-2.drct		1-2.drct
1-2.gca		1-2.gca
1-3-4-2.drct		1-3-4-2.drct
1-3-4-2.gca		1-3-4-2.gca
1-3-4.drct		1-3-4.drct
1-3-4.gca		1-3-4.gca
1-3.drct		1-3.drct
1-3.gca		1-3.gca
1.drct		1.drct
1.gca		1.gca
2.drct		2.drct
2.gca		2.gca
3-7.drct		3-7.drct
3-7.gca		3-7.gca
3.drct		3.drct
3.gca		3.gca
4-5-8-1-2-6-3-7.drct		4-5-8-1-2-6-3-7.drct
4-5-8-1-2-6-3-7.gca		4-5-8-1-2-6-3-7.gca
4-5-8.drct		4-5-8.drct
4-5-8.gca		4-5-8.gca
4.drct		4.drct
4.gca		4.gca
5-8.drct		5-8.drct
5-8.gca		5-8.gca
5.drct		5.drct
5.gca		5.gca
6-3-7.drct		6-3-7.drct
6-3-7.gca		6-3-7.gca
6.drct		6.drct
6.gca		6.gca
7.drct		7.drct
7.gca		7.gca
8.drct		8.drct
8.gca		8.gca
BB.mse		BB.mse
BB12012.msf		BB12012.msf
BB30001.mse		BB30001.mse
HMMMSA.f90		HMMMSA.f90
HMMMSA.f90~		HMMMSA.f90~
HMMMSA_Bali.sh		HMMMSA_Bali.sh
HMMMSA_Bali.sh~		HMMMSA_Bali.sh~
LOG		LOG
backup.f90		backup.f90
bayesalign_D.f90		bayesalign_D.f90
data.txt		data.txt
database.f90		database.f90
database.mod		database.mod
database.o		database.o
expected		expected
fort.99		fort.99
gamma.dat		gamma.dat
getdata.csh		getdata.csh
hmmstr.f95		hmmstr.f95
hmmstr.mod		hmmstr.mod
hmmstr.o		hmmstr.o
hmmstrgca.f90		hmmstrgca.f90
junk.msa		junk.msa
list.txt		list.txt
model_R.hmm		model_R.hmm
newmult.fas		newmult.fas
nohup.out		nohup.out
observed		observed
out.msa		out.msa
out.msf		out.msf
outFile		outFile
outmsa		outmsa
seq2drct.f90		seq2drct.f90
seq2drct.f90~		seq2drct.f90~
small.fas		small.fas
small.msa		small.msa
temp.fas		temp.fas
temp.msa		temp.msa
test.fas		test.fas
test.msa		test.msa
test.seq		test.seq
xHMMMSA		xHMMMSA
xHMMMSA2		xHMMMSA2
xbayesalign_D		xbayesalign_D
xhmmstr_gamma		xhmmstr_gamma
xseq2drct		xseq2drct
xviewdrct		xviewdrct

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Multiple sequence alignments using HMMSTR (bystrc)

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