GitHub - gabet1337/bioinformatics: For the bioinformatics course

Name		Name	Last commit message	Last commit date
Latest commit History 49 Commits
alignments		alignments
rapidNJ		rapidNJ
rapidNJ2		rapidNJ2
reports		reports
results		results
trees		trees
.gitignore		.gitignore
Makefile		Makefile
align.fasta		align.fasta
align.stockholm		align.stockholm
approx.txt		approx.txt
approx_hpfold.cpp		approx_hpfold.cpp
compare_nj.cpp		compare_nj.cpp
compare_rfdist.cpp		compare_rfdist.cpp
ex1.cpp		ex1.cpp
ex2.cpp		ex2.cpp
ex3.cpp		ex3.cpp
ex5.cpp		ex5.cpp
fix_ids.cpp		fix_ids.cpp
hp_bf.cpp		hp_bf.cpp
hpfold.cpp		hpfold.cpp
hpview.py		hpview.py
newick_parser.hpp		newick_parser.hpp
newick_test.cpp		newick_test.cpp
nj.cpp		nj.cpp
nj_tester.cpp		nj_tester.cpp
own_approach.txt		own_approach.txt
patbase_aibtas.fasta		patbase_aibtas.fasta
patbase_aibtas_permuted.fasta		patbase_aibtas_permuted.fasta
phylib_reader.hpp		phylib_reader.hpp
phylib_reader_tester.cpp		phylib_reader_tester.cpp
plot_running.sh		plot_running.sh
plot_saitou_nei.sh		plot_saitou_nei.sh
quicktree		quicktree
rapidnj		rapidnj
rfdist.cpp		rfdist.cpp
rfdist.hpp		rfdist.hpp
running.dat		running.dat
running_time.png		running_time.png
running_time_saitou_nei.png		running_time_saitou_nei.png
saitou_nei.hpp		saitou_nei.hpp
test_lib.hpp		test_lib.hpp
tree1.new		tree1.new
tree2.new		tree2.new