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unofficial repository of CrystFEL for processing serial crystallography dataset

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CrystFEL

This is a personal unofficial repository of CrystFEL for processing serial crystallography dataset. The official CrystFEL website is http://www.desy.de/~twhite/crystfel/ and the repository is http://git.bitwiz.org.uk/?p=crystfel.git.

Warning!

I am testing various ideas on this repository. Some are not stable yet and NOT recommended for publication work. Use at your own risk!

Added Features

hdfsee branch

Should be stable enough for general use.

  • Load stream file directly into hdfsee
  • Show spots and (multiple) lattices simultaneously
  • Scrollbar in hdfsee
  • Export to ADSC format. This is useful for manual inspection of indexing in iMOSFLM. Since the original pixel doesn't have one-to-one correspondence in the output image, this is not perfectly accurate.

multiple-lattice branch

(in progress)

  • Multiple lattice indexing by calling external indexer(s) many times.

scaling branch

(in progress)

  • Calculate CC between reference and each frame
  • Frame rejection based on CC

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unofficial repository of CrystFEL for processing serial crystallography dataset

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