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Performs haplotype assembly from genomic DNA sequence reads for a single individual using a maximum-likelihood based approach. Performs well on diverse NGS technologies, including long read data and Hi-C.

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HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies

HapCUT2 has moved to https://github.com/vibansal/HapCUT2

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Performs haplotype assembly from genomic DNA sequence reads for a single individual using a maximum-likelihood based approach. Performs well on diverse NGS technologies, including long read data and Hi-C.

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