malign

Employs an optimality criterion of minimal cost of phylogenetic tree to choose the best alignment.

This project is left for posterity and not actively developed. See the malign.pdf for documentation of the project.

Authors

by Ward Wheeler and David Gladstein / Documentation by Daniel Janies and Ward Wheeler

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
README.md		README.md
align3.h		align3.h
align44d.c		align44d.c
align71g.c		align71g.c
align73c.c		align73c.c
align77f.c		align77f.c
align79b.c		align79b.c
align84a.c		align84a.c
align96e.c		align96e.c
bit-vect.c		bit-vect.c
bit-vect.h		bit-vect.h
culeli3.c		culeli3.c
dalign24.c		dalign24.c
fast8.c		fast8.c
get_par2.c		get_par2.c
heur14.c		heur14.c
makefile		makefile
malign.pdf		malign.pdf
nodes11.c		nodes11.c
p_all28.c		p_all28.c
p_fun66b.c		p_fun66b.c
p_fun70a.c		p_fun70a.c
p_fun74c.c		p_fun74c.c
p_some12.c		p_some12.c
pvm.c		pvm.c
pvm.h		pvm.h
pvm3.h		pvm3.h
util11c.c		util11c.c
util11e.c		util11e.c
util11m.c		util11m.c
util13n.c		util13n.c
util18d.c		util18d.c
util18h.c		util18h.c
util18k.c		util18k.c
util19l.c		util19l.c
util20i.c		util20i.c
util21g.c		util21g.c
util25b.c		util25b.c
util29a.c		util29a.c
util2q.c		util2q.c
util3r.c		util3r.c
util4j.c		util4j.c
util4p.c		util4p.c
util8f.c		util8f.c
util9o.c		util9o.c
utilpv34.c		utilpv34.c
utils.c		utils.c
utils.h		utils.h
yapp.h		yapp.h