mAMBER is parallel acceleration version of the MD simulation software AMBER. We applied three different level of optimization: fine grained OpenMP parallel on a single CPU, single node CPU-MIC parallel optimization and multi-node multi-MIC collaborated parallel acceleration. By the three optimization methodologies the highest speedup of 5-6 times is achieved compared with the original program.
Paralle Acceleration for AMBER on Tianhe-2
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zhangxiaoyu11/mAMBER
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Paralle Acceleration for AMBER on Tianhe-2
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