Beispiel #1
0
    ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, std::shared_ptr< Query> query)
    {
        assert(schemas.size() == 1);
        for (Parameters::const_iterator it = _parameters.begin(); it != _parameters.end(); ++it)
        	assert(((std::shared_ptr<OperatorParamReference>&)*it)->getParamType() == PARAM_ATTRIBUTE_REF);


        Attributes newAttributes;
        const Attributes &oldAttributes = schemas[0].getAttributes();
        bool includesIndicator = false;
        size_t n = _parameters.size();
        for (size_t i = 0; i < n; i++)
        {
        	const AttributeDesc &attr =
        		oldAttributes[((std::shared_ptr<OperatorParamReference>&)_parameters[i])->getObjectNo()];
        	newAttributes.push_back(AttributeDesc(i, attr.getName(), attr.getType(),
                                                  attr.getFlags(), attr.getDefaultCompressionMethod(),
                                                  attr.getAliases(), &attr.getDefaultValue(),
                                                  attr.getDefaultValueExpr()));
            includesIndicator |= attr.isEmptyIndicator();
        }
        if (!includesIndicator) {
            AttributeDesc const* indicator = schemas[0].getEmptyBitmapAttribute();
            if (indicator != NULL) {
                newAttributes.push_back(AttributeDesc(n, indicator->getName(), indicator->getType(),
                                                      indicator->getFlags(), indicator->getDefaultCompressionMethod(),
                                                      indicator->getAliases()));
            }
        }
        return ArrayDesc(schemas[0].getName(), newAttributes, schemas[0].getDimensions(), defaultPartitioning());
	}
Beispiel #2
0
    ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
    {
        assert(schemas.size() == 2);

        ArrayDesc  const& patternDesc = schemas[0];
        ArrayDesc  const& catalogDesc = schemas[1];
        Attributes const& catalogAttributes = catalogDesc.getAttributes(true);
        Dimensions const& catalogDimensions = catalogDesc.getDimensions();
        Attributes const& patternAttributes = patternDesc.getAttributes(true);
        Dimensions resultDimensions = patternDesc.getDimensions();
        size_t totalAttributes = catalogAttributes.size() + patternAttributes.size() + 1 + catalogDimensions.size();
        Attributes matchAttributes(totalAttributes);

        if (catalogDimensions.size() != resultDimensions.size())
        {
            stringstream left, right;
            printDimNames(left, resultDimensions);
            printDimNames(right, catalogDimensions);
            throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_DIMENSION_COUNT_MISMATCH)
                << "match" << left.str() << right.str();
        }
        for (size_t i = 0, n = catalogDimensions.size(); i < n; i++) {
            if (!(catalogDimensions[i].getStartMin() == resultDimensions[i].getStartMin()
                  && catalogDimensions[i].getChunkInterval() == resultDimensions[i].getChunkInterval()
                  && catalogDimensions[i].getChunkOverlap() == resultDimensions[i].getChunkOverlap()))
            {
                // XXX To do: implement requiresRepart() method, remove interval/overlap checks
                // above, use SCIDB_LE_START_INDEX_MISMATCH here.
                throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_ARRAYS_NOT_CONFORMANT);
            }
        }

        size_t j = 0;
        for (size_t i = 0, n = patternAttributes.size(); i < n; i++, j++) {
            AttributeDesc const& attr = patternAttributes[i];
            matchAttributes[j] = AttributeDesc(j, attr.getName(), attr.getType(), attr.getFlags(),
                                               attr.getDefaultCompressionMethod(), attr.getAliases(), &attr.getDefaultValue(),
                                               attr.getDefaultValueExpr());
        }
        for (size_t i = 0, n = catalogAttributes.size(); i < n; i++, j++) {
            AttributeDesc const& attr = catalogAttributes[i];
            matchAttributes[j] = AttributeDesc(j, "match_" + attr.getName(), attr.getType(), attr.getFlags(),
                                               attr.getDefaultCompressionMethod(), attr.getAliases(), &attr.getDefaultValue(),
                                               attr.getDefaultValueExpr());
        }
        for (size_t i = 0, n = catalogDimensions.size(); i < n; i++, j++) {
            matchAttributes[j] = AttributeDesc(j, "match_" + catalogDimensions[i].getBaseName(), TID_INT64, 0, 0);
        }
        matchAttributes[j] = AttributeDesc(j, DEFAULT_EMPTY_TAG_ATTRIBUTE_NAME, TID_INDICATOR, AttributeDesc::IS_EMPTY_INDICATOR, 0);

        int64_t maxCollisions = evaluate(((boost::shared_ptr<OperatorParamLogicalExpression>&)_parameters[1])->getExpression(),
                                          query, TID_INT64).getInt64();
        if (maxCollisions <= 0 || (int32_t)maxCollisions != maxCollisions)  { 
            throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_WRONG_OPERATOR_ARGUMENT2) << "positive";
        }
        resultDimensions.push_back(DimensionDesc("collision", 0, 0, maxCollisions-1, maxCollisions-1, (uint32_t)maxCollisions, 0));
        return ArrayDesc("match", matchAttributes, resultDimensions);
    }
Beispiel #3
0
	void Blittable::init()
	{
		auto as = DisplayDevice::createAttributeSet();
		attribs_.reset(new Attribute<vertex_texcoord>(AccessFreqHint::DYNAMIC, AccessTypeHint::DRAW));
		attribs_->addAttributeDesc(AttributeDesc(AttrType::POSITION, 2, AttrFormat::FLOAT, false, sizeof(vertex_texcoord), offsetof(vertex_texcoord, vtx)));
		attribs_->addAttributeDesc(AttributeDesc(AttrType::TEXTURE,  2, AttrFormat::FLOAT, false, sizeof(vertex_texcoord), offsetof(vertex_texcoord, tc)));
		as->addAttribute(AttributeBasePtr(attribs_));
		as->setDrawMode(DrawMode::TRIANGLE_STRIP);
		
		addAttributeSet(as);
	}
Beispiel #4
0
RowCollection<Group,Hash>::RowCollection(boost::shared_ptr<Query> const& query, const string& name, const Attributes& attributes, size_t chunkSize)
: _query(query), _attributes(attributes), _chunkSize(chunkSize), _sizeBuffered(0), _mode(RowCollectionModeAppend)
{
    assert(!attributes.empty());
    assert(chunkSize >= 2);

    // Use (CONFIG_MEM_ARRAY_THRESHOLD / 10) as the #bytes the unflushed items may have.
    _maxSizeBuffered = Config::getInstance()->getOption<size_t>(CONFIG_MEM_ARRAY_THRESHOLD) * MiB / 10;

    // Push the empty tag
    Attributes attributesWithET(attributes);
    attributesWithET.push_back(AttributeDesc(attributes.size(), DEFAULT_EMPTY_TAG_ATTRIBUTE_NAME,
           TID_BOOL, AttributeDesc::IS_EMPTY_INDICATOR, 0));

    // get the schema
    Dimensions dims(2);
    dims[0] = DimensionDesc("Row", 0, MAX_COORDINATE, 1, 0);
    dims[1] = DimensionDesc("Column", 0, MAX_COORDINATE, _chunkSize, 0);
    ArrayDesc schema(name, attributesWithET, dims);

    // create a MemArray
    _theArray = make_shared<MemArray>(schema,query);

    // get the array iterators
    _arrayIterators.reserve(attributes.size());
    for (size_t t=0; t<attributes.size(); ++t) {
        _arrayIterators.push_back(_theArray->getIterator(t));
    }
}
Beispiel #5
0
 ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
 {
     Attributes outputAttrs;
     outputAttrs.push_back(AttributeDesc(0, "dummy", TID_DOUBLE, AttributeDesc::IS_NULLABLE, 0));
     Dimensions outputDims;
     outputDims.push_back(DimensionDesc("i",0,0,1,0));
     return ArrayDesc("test_cache", outputAttrs, outputDims);
 }
Beispiel #6
0
 ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
 {
     SplitSettings settings (_parameters, true, query); //construct and check to ensure settings are legit
     vector<AttributeDesc> attributes(1);
     attributes[0] = AttributeDesc((AttributeID)0, "value",  TID_STRING, 0, 0);
     vector<DimensionDesc> dimensions(2);
     dimensions[0] = DimensionDesc("source_instance_id", 0, 0, MAX_COORDINATE, MAX_COORDINATE, 1, 0);
     dimensions[1] = DimensionDesc("chunk_no",    0, 0, MAX_COORDINATE, MAX_COORDINATE, 1, 0);
     return ArrayDesc("split", attributes, dimensions);
 }
	ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, shared_ptr< Query> query)
	{
		ArrayDesc const& inputSchema = schemas[0];
		//FastCountSettings settings (_parameters, true, query);
		vector<DimensionDesc> dimensions(1);
		size_t const nInstances = query->getInstancesCount();
		dimensions[0] = DimensionDesc("i",    0, 0, CoordinateBounds::getMax(), CoordinateBounds::getMax(), 1, 0);
		// dimensions[0] = DimensionDesc("i", 0, 0, nInstances-1, nInstances-1, 1, 0);
		vector<AttributeDesc> attributes;
		attributes.push_back(AttributeDesc((AttributeID)0, "count", TID_UINT64, AttributeDesc::IS_NULLABLE, 0));
		return ArrayDesc("fast_count", attributes, dimensions, defaultPartitioning(), inputSchema.getResidency(),false);
	}
 ArrayDesc inferSchema(vector<ArrayDesc> inputSchemas, shared_ptr<Query> query)
 {
     Attributes atts(1);
     atts[0] = AttributeDesc((AttributeID)0, "success",  TID_BOOL, 0, CompressorType::NONE );
     Dimensions dims(1);
     dims[0] = DimensionDesc("i", 0, 0, 0, 0, 1, 0);
     //#ifdef CPP11
     return ArrayDesc("", atts, dims, defaultPartitioning(), query->getDefaultArrayResidency());
     //#else
     //return ArrayDesc("", atts, dims);
     //#endif
 }
    ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
    {
        assert(schemas.size() == 1);
        ArrayDesc const& desc = schemas[0];
        Dimensions const& dims = desc.getDimensions();
        Attributes const& attrs = desc.getAttributes();
        AttributeID aid = 0;
        if (_parameters.size() >= 1) { 
            aid = ((boost::shared_ptr<OperatorParamReference>&)_parameters[0])->getObjectNo();
        }
        AggregatePtr maxAggregate = AggregateLibrary::getInstance()->createAggregate("max", TypeLibrary::getType(attrs[aid].getType()));
        Attributes aggAttrs(1);
        aggAttrs[0] = AttributeDesc((AttributeID)0,
                                    attrs[aid].getName() + "_max",
                                    maxAggregate->getResultType().typeId(),
                                    AttributeDesc::IS_NULLABLE,
                                    0);


        if (_parameters.size() <= 1) { 
            Dimensions aggDims(1);
            aggDims[0] = DimensionDesc("i", 0, 0, 0, 0, 1, 0);
            return ArrayDesc(desc.getName(), aggAttrs, aggDims);
        } else { 
            vector<int> groupBy(_parameters.size()-1);
            for (size_t i = 0; i < groupBy.size(); i++) { 
                groupBy[i] = ((boost::shared_ptr<OperatorParamReference>&)_parameters[i + 1])->getObjectNo();
            }
            Dimensions aggDims(groupBy.size());
            for (size_t i = 0, n = aggDims.size(); i < n; i++) { 
                DimensionDesc const& srcDim = dims[groupBy[i]]; 
                aggDims[i] = DimensionDesc(  srcDim.getBaseName(),
                                             srcDim.getStartMin(),
                                             srcDim.getCurrStart(),
                                             srcDim.getCurrEnd(),
                                             srcDim.getEndMax(),
                                             i == 0 && groupBy[i] == 0 ? srcDim.getChunkInterval() : srcDim.getCurrLength(),
                                             0,
                                             srcDim.getType(),
                                             srcDim.getFlags(),
                                             srcDim.getMappingArrayName(),
                                             srcDim.getComment(),
                                             srcDim.getFuncMapOffset(),
                                             srcDim.getFuncMapScale());
            }
            return ArrayDesc(desc.getName(), aggAttrs, aggDims);
        }
	}
    ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
	{
        assert(schemas.size() == 1);

        const ArrayDesc& desc = schemas[0];
        const Attributes &oldAttributes = desc.getAttributes();
        Attributes newAttributes = desc.getAttributes();

		for (size_t paramNo = 0, paramCount = _parameters.size(); paramNo < paramCount; paramNo+=2)
		{
			int32_t attNo = ((boost::shared_ptr<OperatorParamReference>&)_parameters[paramNo])->getObjectNo();
			AttributeDesc attr = oldAttributes[attNo];
			newAttributes[attNo] = AttributeDesc(attNo,
                                                 ((boost::shared_ptr<OperatorParamReference>&)_parameters[paramNo + 1])->getObjectName(),
                                                 attr.getType(), attr.getFlags(), attr.getDefaultCompressionMethod(), 
                                                 attr.getAliases(), &attr.getDefaultValue(), attr.getDefaultValueExpr());
		}
		
        return ArrayDesc(desc.getId(), desc.getUAId(), desc.getVersionId(), desc.getName(), newAttributes, desc.getDimensions());
	}
    inline ArrayDesc createWindowDesc(ArrayDesc const& desc)
    {
        Dimensions const& dims = desc.getDimensions();
        Dimensions aggDims(dims.size());
        for (size_t i = 0, n = dims.size(); i < n; i++)
        {
            DimensionDesc const& srcDim = dims[i];
            aggDims[i] = DimensionDesc(srcDim.getBaseName(),
                                       srcDim.getNamesAndAliases(),
                                       srcDim.getStartMin(),
                                       srcDim.getCurrStart(),
                                       srcDim.getCurrEnd(),
                                       srcDim.getEndMax(),
                                       srcDim.getChunkInterval(), 
                                       0,
                                       srcDim.getType(),
                                       srcDim.getFlags(),
                                       srcDim.getMappingArrayName(),
                                       srcDim.getComment(),
                                       srcDim.getFuncMapOffset(),
                                       srcDim.getFuncMapScale());
        }

        ArrayDesc output (desc.getName(), Attributes(), aggDims);

        for (size_t i = dims.size() * 2, size = _parameters.size(); i < size; i++)
        {
            addAggregatedAttribute( (shared_ptr <OperatorParamAggregateCall> &) _parameters[i], desc, output);
        }

        if ( desc.getEmptyBitmapAttribute())
        {
            AttributeDesc const* eAtt = desc.getEmptyBitmapAttribute();
            output.addAttribute(AttributeDesc(output.getAttributes().size(), eAtt->getName(),
                eAtt->getType(), eAtt->getFlags(), eAtt->getDefaultCompressionMethod()));
        }

        return output;
    }
    /**
     * Test sort array once.
     * The method sets the chunk limit to the indicated number,
     * then tries to create a chunk of the inidicated size and
     * type, using the indicated mode.  If "expectFail" is true
     * then the method looks for the "CHUNK_TOO_LARGE" exception,
     * and fails if it does not see it.  If "expectFail" is false,
     * the method does the opposite.  Before exiting, the method
     * always resets the chunk limit to the original value.
     *
     * @param[in]   query
     * @param[in]   limit      the desired chunk limit (as a string)
     * @param[in]   type       the value type
     * @param[in]   count      how many values
     * @param[in]   mode       iteration mode
     * @param[in]   expectFail is an error expected?
     *
     * @throw SCIDB_SE_INTERNAL::SCIDB_LE_UNITTEST_FAILED
     */
    void testOnce_ChunkLimit(std::shared_ptr<Query>& query,
                             string const& limit,
                             TypeId const& type,
                             int count,
                             int mode,
                             bool expectFail)
    {
        bool failed = false;

        LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest Attempt [type=" << type << "][count=" << count
                      << "][mode=" << mode << "][expectFail=" << expectFail << "]");

        // Array schema
        vector<AttributeDesc> attributes(1);
        attributes[0] = AttributeDesc((AttributeID)0, "X",  type, AttributeDesc::IS_NULLABLE, 0);

        vector<DimensionDesc> dimensions(1);
        dimensions[0] = DimensionDesc(string("dummy_dimension"), 0, count, count, 0);
        ArrayDesc schema("dummy_array", addEmptyTagAttribute(attributes), dimensions,
                         defaultPartitioning(),
                         query->getDefaultArrayResidency());

        // Test array
        std::shared_ptr<MemArray> array(new MemArray(schema, query));

        // set the chunk size limit
        std::string oldLimit;
        try
        {
            oldLimit = Config::getInstance()->setOptionValue("chunk-size-limit-mb",
                                                             limit);
        }
        catch (Exception const& e)
        {
            LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest unexpected exception: "
                          << e.getStringifiedLongErrorCode());
            throw SYSTEM_EXCEPTION(SCIDB_SE_INTERNAL, SCIDB_LE_UNITTEST_FAILED)
                << "UnitTestChunkLimitPhysical" << "setOptionValue";
        }

        // try to create the chunk
        try
        {
            buildRandomArrayChunk(query, *array, type, count, mode);
        }
        catch (Exception const& x)
        {
            if (!expectFail)
            {
                LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest unexpected exception: "
                              << x.getStringifiedLongErrorCode());
                failed = true;
            }
            else if (x.getLongErrorCode() != SCIDB_LE_CHUNK_TOO_LARGE)
            {
                LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest incorrect exception: "
                              << x.getStringifiedLongErrorCode());
                failed = true;
            }
        }

        // set the chunk size limit back
        try
        {
            Config::getInstance()->setOptionValue("chunk-size-limit-mb",
                                                  oldLimit);
        }
        catch (Exception const& e)
        {
            LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest unexpected exception: "
                          << e.getStringifiedLongErrorCode());
            throw SYSTEM_EXCEPTION(SCIDB_SE_INTERNAL, SCIDB_LE_UNITTEST_FAILED)
                << "UnitTestChunkLimitPhysical" << "setOptionValue2";
        }

        if (failed)
        {
            LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest Failed [type=" << type << "][count=" << count
                          << "][mode=" << mode << "][expectFail=" << expectFail << "]");
            throw SYSTEM_EXCEPTION(SCIDB_SE_INTERNAL, SCIDB_LE_UNITTEST_FAILED)
                << "UnitTestChunkLimitPhysical" << "unexpected status";
        }
        else
        {
            LOG4CXX_DEBUG(logger, "ChunkLimit UnitTest Success [type=" << type << "][count=" << count
                          << "][mode=" << mode << "][expectFail=" << expectFail << "]");
        }
    }
    ArrayDesc inferSchema(std::vector< ArrayDesc> schemas, boost::shared_ptr< Query> query)
    {
        assert(schemas.size() == 1);
        assert(_parameters[0]->getParamType() == PARAM_ATTRIBUTE_REF);
        assert(_parameters[1]->getParamType() == PARAM_LOGICAL_EXPRESSION);

        if ( _parameters.size() % 2 != 0 )
        {
            throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_WRONG_OPERATOR_ARGUMENTS_COUNT2) << "tile_apply";
        }

        Attributes outAttrs;
        AttributeID nextAttrId =0;

        for (size_t i=0; i<schemas[0].getAttributes().size(); i++) {
            AttributeDesc const& attr = schemas[0].getAttributes()[i];
            if(attr.getType()!=TID_INDICATOR) {
                outAttrs.push_back( AttributeDesc(nextAttrId++,
                                                  attr.getName(),
                                                  attr.getType(),
                                                  attr.getFlags(),
                                                  attr.getDefaultCompressionMethod(),
                                                  attr.getAliases(),
                                                  attr.getReserve(),
                                                  &attr.getDefaultValue(),
                                                  attr.getDefaultValueExpr(),
                                                  attr.getVarSize()));
            }
        }

        size_t k;
        for (k=0; k<_parameters.size(); k+=2) {

            const string &attributeName = ((boost::shared_ptr<OperatorParamReference>&)_parameters[k])->getObjectName();
            Expression expr;
            expr.compile(((boost::shared_ptr<OperatorParamLogicalExpression>&)_parameters[k+1])->getExpression(),
                         query, _properties.tile, TID_VOID, schemas);
            assert(!_properties.tile);

            int flags = 0;
            if (expr.isNullable()) {
                flags = (int)AttributeDesc::IS_NULLABLE;
            }

            for (size_t j = 0; j < nextAttrId; j++) {
                AttributeDesc const& attr = outAttrs[j];
                if (attr.getName() ==  attributeName)
                {
                    throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_DUPLICATE_ATTRIBUTE_NAME) << attributeName;
                }
            }

            outAttrs.push_back(AttributeDesc(nextAttrId++,
                                             attributeName,
                                             expr.getType(),
                                             flags,
                                             0));
        }

        if(schemas[0].getEmptyBitmapAttribute()) {
            AttributeDesc const* emptyTag = schemas[0].getEmptyBitmapAttribute();
            for (size_t j = 0; j < nextAttrId; j++) {
                AttributeDesc const& attr = outAttrs[j];
                if (attr.getName() ==  emptyTag->getName()) {
                    throw USER_EXCEPTION(SCIDB_SE_INFER_SCHEMA, SCIDB_LE_DUPLICATE_ATTRIBUTE_NAME) << attr.getName();
                }
            }
            outAttrs.push_back( AttributeDesc(nextAttrId,
                                              emptyTag->getName(),
                                              emptyTag->getType(),
                                              emptyTag->getFlags(),
                                              emptyTag->getDefaultCompressionMethod(),
                                              emptyTag->getAliases(),
                                              emptyTag->getReserve(),
                                              &emptyTag->getDefaultValue(),
                                              emptyTag->getDefaultValueExpr(),
                                              emptyTag->getVarSize()));
        }
        return ArrayDesc(schemas[0].getName(), outAttrs, schemas[0].getDimensions());
    }