END_TEST
START_TEST (test_Reaction_compartment)
{
const char *name = "Cell";
Reaction_t * r = Reaction_create(3, 1);
Reaction_setCompartment(r, name);
fail_unless( !strcmp(Reaction_getCompartment(r), name) );
fail_unless( Reaction_isSetCompartment(r) );
if (Reaction_getCompartment(r) == name)
{
fail("Reaction_setCompartment(...) did not make a copy of string.");
}
/* Reflexive case (pathological) */
Reaction_setCompartment(r, Reaction_getCompartment(r));
fail_unless( !strcmp(Reaction_getCompartment(r), name) );
Reaction_unsetCompartment(r);
fail_unless( !Reaction_isSetCompartment(r) );
if (Reaction_getCompartment(r) != NULL)
{
fail("Reaction_unsetCompartment(r) did not clear string.");
}
Reaction_free(r);
}
END_TEST
START_TEST (test_Reaction_createWithNS )
{
XMLNamespaces_t *xmlns = XMLNamespaces_create();
XMLNamespaces_add(xmlns, "http://www.sbml.org", "testsbml");
SBMLNamespaces_t *sbmlns = SBMLNamespaces_create(2,1);
SBMLNamespaces_addNamespaces(sbmlns,xmlns);
Reaction_t *object =
Reaction_createWithNS (sbmlns);
fail_unless( SBase_getTypeCode ((SBase_t *) object) == SBML_REACTION );
fail_unless( SBase_getMetaId ((SBase_t *) object) == NULL );
fail_unless( SBase_getNotes ((SBase_t *) object) == NULL );
fail_unless( SBase_getAnnotation((SBase_t *) object) == NULL );
fail_unless( SBase_getLevel ((SBase_t *) object) == 2 );
fail_unless( SBase_getVersion ((SBase_t *) object) == 1 );
fail_unless( Reaction_getNamespaces (object) != NULL );
fail_unless( XMLNamespaces_getLength(Reaction_getNamespaces(object)) == 2 );
Reaction_free(object);
XMLNamespaces_free(xmlns);
SBMLNamespaces_free(sbmlns);
}
END_TEST
START_TEST (test_Reaction_addModifier1)
{
Reaction_t *m = Reaction_create(2, 2);
SpeciesReference_t *p
= SpeciesReference_createModifier(2, 2);
SpeciesReference_t *p1
= SpeciesReference_createModifier(2, 2);
SpeciesReference_setSpecies(p1, "k");
SpeciesReference_setId(p1, "k1");
int i = Reaction_addModifier(m, p);
fail_unless( i == LIBSBML_INVALID_OBJECT);
SpeciesReference_setSpecies(p, "k");
SpeciesReference_setId(p, "k1");
i = Reaction_addModifier(m, p);
fail_unless( i == LIBSBML_OPERATION_SUCCESS);
fail_unless( Reaction_getNumModifiers(m) == 1);
i = Reaction_addModifier(m, p1);
fail_unless( i == LIBSBML_DUPLICATE_OBJECT_ID);
fail_unless( Reaction_getNumModifiers(m) == 1);
SpeciesReference_free(p);
SpeciesReference_free(p1);
Reaction_free(m);
}
END_TEST
START_TEST (test_Reaction_createKineticLaw)
{
Reaction_t *r = Reaction_create(2, 2);
KineticLaw_t *kl = Reaction_createKineticLaw(r);
fail_unless( Reaction_isSetKineticLaw(r) == 1);
fail_unless( SBase_getLevel((SBase_t *) (kl)) == 2 );
fail_unless( SBase_getVersion((SBase_t *) (kl)) == 2 );
Reaction_free(r);
}
END_TEST
START_TEST (test_Reaction_createModifier)
{
Reaction_t *m = Reaction_create(2, 2);
SpeciesReference_t *p = Reaction_createModifier(m);
fail_unless( Reaction_getNumModifiers(m) == 1);
fail_unless( SBase_getLevel((SBase_t *) (p)) == 2 );
fail_unless( SBase_getVersion((SBase_t *) (p)) == 2 );
Reaction_free(m);
}
END_TEST
START_TEST (test_Reaction_addModifier3)
{
Reaction_t *m = Reaction_create(2, 2);
SpeciesReference_t *p = NULL;
int i = Reaction_addModifier(m, p);
fail_unless( i == LIBSBML_OPERATION_FAILED);
fail_unless( Reaction_getNumModifiers(m) == 0);
Reaction_free(m);
}
END_TEST
START_TEST (test_Reaction_setName3)
{
Reaction_t *p =
Reaction_create(2, 2);
int i = Reaction_setName(p, NULL);
fail_unless( i == LIBSBML_OPERATION_SUCCESS );
fail_unless( !Reaction_isSetName(p) );
Reaction_free(p);
}
END_TEST
START_TEST (test_Reaction_addModifier2)
{
Reaction_t *m = Reaction_create(2, 2);
SpeciesReference_t *p
= SpeciesReference_createModifier(2, 1);
SpeciesReference_setSpecies(p, "k");
int i = Reaction_addModifier(m, p);
fail_unless( i == LIBSBML_VERSION_MISMATCH);
fail_unless( Reaction_getNumModifiers(m) == 0);
SpeciesReference_free(p);
Reaction_free(m);
}
END_TEST
START_TEST (test_Reaction_addProduct3)
{
Reaction_t *m = Reaction_create(2, 2);
SpeciesReference_t *p
= SpeciesReference_create(1, 2);
SpeciesReference_setSpecies(p, "k");
int i = Reaction_addProduct(m, p);
fail_unless( i == LIBSBML_LEVEL_MISMATCH);
fail_unless( Reaction_getNumProducts(m) == 0);
SpeciesReference_free(p);
Reaction_free(m);
}
END_TEST
//START_TEST (test_Reaction_createWith)
//{
// KineticLaw_t *kl = KineticLaw_create(2, 4);
// Reaction_t *r = Reaction_createWithKineticLaw("r1", "", kl, 0, 1);
//
//
// fail_unless( SBase_getTypeCode ((SBase_t *) r) == SBML_REACTION );
// fail_unless( SBase_getMetaId ((SBase_t *) r) == NULL );
// fail_unless( SBase_getNotes ((SBase_t *) r) == NULL );
// fail_unless( SBase_getAnnotation((SBase_t *) r) == NULL );
//
// fail_unless( Reaction_getName(r) == NULL );
//
// fail_unless( !strcmp(Reaction_getId(r), "r1") );
//
// //fail_unless( Reaction_getKineticLaw(r) == kl );
// fail_unless( Reaction_getReversible(r) == 0 );
// fail_unless( Reaction_getFast (r) == 1 );
//
// fail_unless( Reaction_isSetId (r) );
// fail_unless( !Reaction_isSetName (r) );
// fail_unless( Reaction_isSetKineticLaw(r) );
//
// fail_unless( Reaction_getNumReactants(r) == 0 );
// fail_unless( Reaction_getNumProducts (r) == 0 );
// fail_unless( Reaction_getNumModifiers(r) == 0 );
//
// KineticLaw_free(kl);
// Reaction_free(r);
//}
//END_TEST
START_TEST (test_Reaction_free_NULL)
{
Reaction_free(NULL);
}
void
ReactionTest_teardown (void)
{
Reaction_free(R);
}
