Beispiel #1
0
int main(int argc, Char *argv[])
{  /* Read in sequences or frequencies and bootstrap or jackknife them */
#ifdef MAC
  argc = 1;                /* macsetup("SeqBoot","");                */
  argv[0] = "SeqBoot";
#endif
  init(argc,argv);
  openfile(&infile, INFILE, "input file", "r", argv[0], infilename);
  ibmpc = IBMCRT;
  ansi = ANSICRT;
  doinput(argc, argv);
  bootwrite();
  
  freenewer();
  freenew();
  freerest();

  if (nodep)
    matrix_char_delete(nodep, spp);
  if (nodef)
    matrix_double_delete(nodef, spp);

  FClose(infile);
  if (factors) {
    FClose(factfile);
    FClose(outfactfile);
  }
  if (weights)
    FClose(weightfile);
  if (categories) {
    FClose(catfile);
    FClose(outcatfile);
  }
  if(mixture)
    FClose(outmixfile);
  if(ancvar)
    FClose(outancfile);
  if (justwts && !permute) {
    FClose(outweightfile);
  }
  else
    FClose(outfile);
#ifdef MAC
  fixmacfile(outfilename);
  if (justwts && !permute)
    fixmacfile(outweightfilename);
  if (categories)
    fixmacfile(outcatfilename);
  if (mixture)
    fixmacfile(outmixfilename);
#endif
  printf("Done.\n\n");
#ifdef WIN32
  phyRestoreConsoleAttributes();
#endif
  return 0;
}
Beispiel #2
0
int main(int argc, Char *argv[])
{   /* Read in sequences or frequencies and bootstrap or jackknife them */
    init(argc,argv);
    openfile(&infile, argv[1], "input file", "r", argv[0], infilename);
    reps = atol(argv[2]);
    doinput(argc, argv);
    bootwrite();

    freenewer();
    freenew();
    freerest();

    if (nodep)
        matrix_char_delete(nodep, spp);

    FClose(infile);

    return 0;
}