void EventType::writeKeypoints(cv::FileStorage outfile) throw(runtime_error) {
if(outfile.isOpened()) {
outfile << getId() + "_pts" << getKeypoints();
} else {
throw runtime_error("File is not open for writing");
}
}
std::vector<LedMeasurement> const &
SBDBlobExtractor::extractBlobs(cv::Mat const &grayImage) {
m_latestMeasurements.clear();
m_lastGrayImage = grayImage.clone();
m_debugThresholdImageDirty = true;
m_debugBlobImageDirty = true;
getKeypoints(grayImage);
#if 0
// This code uses the Keypoint Detailer, but is slightly unreliable.
/// We'll apply the threshold here first, instead of trusting the flood
/// fill to repeatably find the same points.
cv::Mat thresholded;
cv::threshold(grayImage, thresholded, m_sbdParams.minThreshold, 255,
cv::THRESH_BINARY);
m_latestMeasurements =
m_keypointDetailer->augmentKeypoints(thresholded, m_keyPoints);
#endif
/// Use the LedMeasurement constructor to do the conversion from
/// keypoint to measurement right now.
m_latestMeasurements.resize(m_keyPoints.size());
std::transform(
begin(m_keyPoints), end(m_keyPoints), begin(m_latestMeasurements),
[](cv::KeyPoint const &kp) { return LedMeasurement{kp}; });
return m_latestMeasurements;
}
void EventType::writeForSVM(ofstream &outfile, string label, bool add_keypoints) throw(runtime_error) {
cv::Mat desc = getDescriptors();
vector<cv::Point2f> points = getKeypoints();
if(outfile.is_open()) {
for(int i=0; i<desc.rows; i++) {
outfile << label << " ";
for(int j=0; j<desc.cols; j++) {
outfile << j+1 << ":" << desc.at<float>(i, j) << " ";
}
if(add_keypoints) {
outfile << desc.cols+1 << ":" << points.at(i).x << " ";
outfile << desc.cols+2 << ":" << points.at(i).y << " ";
}
outfile << endl;
}
} else {
throw runtime_error("File is not open for writing");
}
}
void
pcl::rec_3d_framework::LocalRecognitionPipeline<Distance, PointInT, FeatureT>::recognize ()
{
models_.reset (new std::vector<ModelT>);
transforms_.reset (new std::vector<Eigen::Matrix4f, Eigen::aligned_allocator<Eigen::Matrix4f> >);
PointInTPtr processed;
typename pcl::PointCloud<FeatureT>::Ptr signatures (new pcl::PointCloud<FeatureT> ());
//pcl::PointCloud<int> keypoints_input;
PointInTPtr keypoints_pointcloud;
if (signatures_ != 0 && processed_ != 0 && (signatures_->size () == keypoints_pointcloud->points.size ()))
{
keypoints_pointcloud = keypoints_input_;
signatures = signatures_;
processed = processed_;
std::cout << "Using the ISPK ..." << std::endl;
}
else
{
processed.reset( (new pcl::PointCloud<PointInT>));
if (indices_.size () > 0)
{
PointInTPtr sub_input (new pcl::PointCloud<PointInT>);
pcl::copyPointCloud (*input_, indices_, *sub_input);
estimator_->estimate (sub_input, processed, keypoints_pointcloud, signatures);
}
else
{
estimator_->estimate (input_, processed, keypoints_pointcloud, signatures);
}
processed_ = processed;
}
std::cout << "Number of keypoints:" << keypoints_pointcloud->points.size () << std::endl;
int size_feat = sizeof(signatures->points[0].histogram) / sizeof(float);
//feature matching and object hypotheses
std::map<std::string, ObjectHypothesis> object_hypotheses;
{
for (size_t idx = 0; idx < signatures->points.size (); idx++)
{
float* hist = signatures->points[idx].histogram;
std::vector<float> std_hist (hist, hist + size_feat);
flann_model histogram;
histogram.descr = std_hist;
flann::Matrix<int> indices;
flann::Matrix<float> distances;
nearestKSearch (flann_index_, histogram, 1, indices, distances);
//read view pose and keypoint coordinates, transform keypoint coordinates to model coordinates
Eigen::Matrix4f homMatrixPose;
getPose (flann_models_.at (indices[0][0]).model, flann_models_.at (indices[0][0]).view_id, homMatrixPose);
typename pcl::PointCloud<PointInT>::Ptr keypoints (new pcl::PointCloud<PointInT> ());
getKeypoints (flann_models_.at (indices[0][0]).model, flann_models_.at (indices[0][0]).view_id, keypoints);
PointInT view_keypoint = keypoints->points[flann_models_.at (indices[0][0]).keypoint_id];
PointInT model_keypoint;
model_keypoint.getVector4fMap () = homMatrixPose.inverse () * view_keypoint.getVector4fMap ();
typename std::map<std::string, ObjectHypothesis>::iterator it_map;
if ((it_map = object_hypotheses.find (flann_models_.at (indices[0][0]).model.id_)) != object_hypotheses.end ())
{
//if the object hypothesis already exists, then add information
ObjectHypothesis oh = (*it_map).second;
oh.correspondences_pointcloud->points.push_back (model_keypoint);
oh.correspondences_to_inputcloud->push_back (
pcl::Correspondence (static_cast<int> (oh.correspondences_pointcloud->points.size () - 1),
static_cast<int> (idx), distances[0][0]));
oh.feature_distances_->push_back (distances[0][0]);
}
else
{
//create object hypothesis
ObjectHypothesis oh;
typename pcl::PointCloud<PointInT>::Ptr correspondences_pointcloud (new pcl::PointCloud<PointInT> ());
correspondences_pointcloud->points.push_back (model_keypoint);
oh.model_ = flann_models_.at (indices[0][0]).model;
oh.correspondences_pointcloud = correspondences_pointcloud;
//last keypoint for this model is a correspondence the current scene keypoint
pcl::CorrespondencesPtr corr (new pcl::Correspondences ());
oh.correspondences_to_inputcloud = corr;
oh.correspondences_to_inputcloud->push_back (pcl::Correspondence (0, static_cast<int> (idx), distances[0][0]));
boost::shared_ptr < std::vector<float> > feat_dist (new std::vector<float>);
feat_dist->push_back (distances[0][0]);
oh.feature_distances_ = feat_dist;
object_hypotheses[oh.model_.id_] = oh;
}
}
}
typename std::map<std::string, ObjectHypothesis>::iterator it_map;
std::vector<float> feature_distance_avg;
{
//pcl::ScopeTime t("Geometric verification, RANSAC and transform estimation");
for (it_map = object_hypotheses.begin (); it_map != object_hypotheses.end (); it_map++)
{
std::vector < pcl::Correspondences > corresp_clusters;
cg_algorithm_->setSceneCloud (keypoints_pointcloud);
cg_algorithm_->setInputCloud ((*it_map).second.correspondences_pointcloud);
cg_algorithm_->setModelSceneCorrespondences ((*it_map).second.correspondences_to_inputcloud);
cg_algorithm_->cluster (corresp_clusters);
std::cout << "Instances:" << corresp_clusters.size () << " Total correspondences:" << (*it_map).second.correspondences_to_inputcloud->size () << " " << it_map->first << std::endl;
std::vector<bool> good_indices_for_hypothesis (corresp_clusters.size (), true);
if (threshold_accept_model_hypothesis_ < 1.f)
{
//sort the hypotheses for each model according to their correspondences and take those that are threshold_accept_model_hypothesis_ over the max cardinality
int max_cardinality = -1;
for (size_t i = 0; i < corresp_clusters.size (); i++)
{
//std::cout << (corresp_clusters[i]).size() << " -- " << (*(*it_map).second.correspondences_to_inputcloud).size() << std::endl;
if (max_cardinality < static_cast<int> (corresp_clusters[i].size ()))
{
max_cardinality = static_cast<int> (corresp_clusters[i].size ());
}
}
for (size_t i = 0; i < corresp_clusters.size (); i++)
{
if (static_cast<float> ((corresp_clusters[i]).size ()) < (threshold_accept_model_hypothesis_ * static_cast<float> (max_cardinality)))
{
good_indices_for_hypothesis[i] = false;
}
}
}
for (size_t i = 0; i < corresp_clusters.size (); i++)
{
if (!good_indices_for_hypothesis[i])
continue;
//drawCorrespondences (processed, it_map->second, keypoints_pointcloud, corresp_clusters[i]);
Eigen::Matrix4f best_trans;
typename pcl::registration::TransformationEstimationSVD < PointInT, PointInT > t_est;
t_est.estimateRigidTransformation (*(*it_map).second.correspondences_pointcloud, *keypoints_pointcloud, corresp_clusters[i], best_trans);
models_->push_back ((*it_map).second.model_);
transforms_->push_back (best_trans);
}
}
}
std::cout << "Number of hypotheses:" << models_->size() << std::endl;
/**
* POSE REFINEMENT
**/
if (ICP_iterations_ > 0)
{
pcl::ScopeTime ticp ("ICP ");
//Prepare scene and model clouds for the pose refinement step
PointInTPtr cloud_voxelized_icp (new pcl::PointCloud<PointInT> ());
pcl::VoxelGrid<PointInT> voxel_grid_icp;
voxel_grid_icp.setInputCloud (processed);
voxel_grid_icp.setLeafSize (VOXEL_SIZE_ICP_, VOXEL_SIZE_ICP_, VOXEL_SIZE_ICP_);
voxel_grid_icp.filter (*cloud_voxelized_icp);
source_->voxelizeAllModels (VOXEL_SIZE_ICP_);
#pragma omp parallel for schedule(dynamic,1) num_threads(omp_get_num_procs())
for (int i = 0; i < static_cast<int>(models_->size ()); i++)
{
ConstPointInTPtr model_cloud;
PointInTPtr model_aligned (new pcl::PointCloud<PointInT>);
model_cloud = models_->at (i).getAssembled (VOXEL_SIZE_ICP_);
pcl::transformPointCloud (*model_cloud, *model_aligned, transforms_->at (i));
typename pcl::registration::CorrespondenceRejectorSampleConsensus<PointInT>::Ptr rej (
new pcl::registration::CorrespondenceRejectorSampleConsensus<PointInT> ());
rej->setInputTarget (cloud_voxelized_icp);
rej->setMaximumIterations (1000);
rej->setInlierThreshold (0.005f);
rej->setInputSource (model_aligned);
pcl::IterativeClosestPoint<PointInT, PointInT> reg;
reg.addCorrespondenceRejector (rej);
reg.setInputTarget (cloud_voxelized_icp); //scene
reg.setInputSource (model_aligned); //model
reg.setMaximumIterations (ICP_iterations_);
reg.setMaxCorrespondenceDistance (VOXEL_SIZE_ICP_ * 4.f);
typename pcl::PointCloud<PointInT>::Ptr output_ (new pcl::PointCloud<PointInT> ());
reg.align (*output_);
Eigen::Matrix4f icp_trans = reg.getFinalTransformation ();
transforms_->at (i) = icp_trans * transforms_->at (i);
}
}
/**
* HYPOTHESES VERIFICATION
**/
if (hv_algorithm_)
{
pcl::ScopeTime thv ("HV verification");
std::vector<typename pcl::PointCloud<PointInT>::ConstPtr> aligned_models;
aligned_models.resize (models_->size ());
for (size_t i = 0; i < models_->size (); i++)
{
ConstPointInTPtr model_cloud = models_->at (i).getAssembled (0.0025f);
//ConstPointInTPtr model_cloud = models_->at (i).getAssembled (VOXEL_SIZE_ICP_);
PointInTPtr model_aligned (new pcl::PointCloud<PointInT>);
pcl::transformPointCloud (*model_cloud, *model_aligned, transforms_->at (i));
aligned_models[i] = model_aligned;
}
std::vector<bool> mask_hv;
hv_algorithm_->setSceneCloud (input_);
hv_algorithm_->addModels (aligned_models, true);
hv_algorithm_->verify ();
hv_algorithm_->getMask (mask_hv);
boost::shared_ptr < std::vector<ModelT> > models_temp;
boost::shared_ptr < std::vector<Eigen::Matrix4f, Eigen::aligned_allocator<Eigen::Matrix4f> > > transforms_temp;
models_temp.reset (new std::vector<ModelT>);
transforms_temp.reset (new std::vector<Eigen::Matrix4f, Eigen::aligned_allocator<Eigen::Matrix4f> >);
for (size_t i = 0; i < models_->size (); i++)
{
if (!mask_hv[i])
continue;
models_temp->push_back (models_->at (i));
transforms_temp->push_back (transforms_->at (i));
}
models_ = models_temp;
transforms_ = transforms_temp;
}
}
