bool action::is_equal(action const & a) const {
if (kind() != a.kind())
return false;
switch (kind()) {
case action_kind::Skip:
return true;
case action_kind::Binder: case action_kind::Binders: case action_kind::Expr:
return rbp() == a.rbp();
case action_kind::Ext:
return m_ptr == a.m_ptr;
case action_kind::LuaExt:
return get_lua_fn() == a.get_lua_fn();
case action_kind::Exprs:
return
rbp() == a.rbp() &&
get_sep() == a.get_sep() &&
get_rec() == a.get_rec() &&
get_initial() == a.get_initial() &&
get_terminator() == a.get_terminator() &&
is_fold_right() == a.is_fold_right();
case action_kind::ScopedExpr:
return
rbp() == a.rbp() &&
get_rec() == a.get_rec();
}
lean_unreachable(); // LCOV_EXCL_LINE
}
STATIC void node_dump(Linear_s *t, Blknum_t blknum, int indent)
{
Buf_s *buf;
Node_s *node;
Blknum_t overflow;
if (!blknum) return;
buf = t_get(t, blknum);
node = buf->d;
Hrec_s rec;
unint i;
if (Dump_buf) {
pr_buf(buf, indent);
}
pr_head(node, indent);
for (i = 0; i < node->numrecs; i++) {
rec = get_rec(node, i);
pr_indent(indent);
printf("%ld. ", i);
rec_dump(rec);
}
overflow = node->overflow;
buf_put(&buf);
if (overflow) {
node_dump(t, overflow, indent+1);
}
}
STATIC void rec_copy(Node_s *dst, int a, Node_s *src, int b)
{
Hrec_s rec = get_rec(src, b);
store_lump(dst, rec.val);
store_key(dst, rec.key);
store_end(dst, a);
}
void mem_free(long index)
{
// Check if index is a valid start of a memory block
if (get_rec(index) != START)
return;
// Free index
set_rec(index, FREE);
// Free all folowing USED longs
for (long i = index + 1; i < N; i++)
{
if (get_rec(i) == USED)
{
set_rec(i, FREE);
}
else
break;
}
}
STATIC void delete_rec(Node_s *node, unint i)
{
Hrec_s rec;
aver(i < node->numrecs);
rec = get_rec(node, i);
node->free += rec.val.size + LEAF_OVERHEAD;
--node->numrecs;
if (i < node->numrecs) {
memmove( &node->rec[i], &node->rec[i+1],
(node->numrecs - i) * SZ_U16);
}
}
STATIC void pr_node(Node_s *node)
{
unint i;
Hrec_s rec;
pr_head(node, 0);
for (i = 0; i < node->numrecs; i++) {
rec = get_rec(node, i);
printf("%3ld. ", i);
pr_rec(rec);
putchar('\n');
}
}
void mem_available(long *empty, long *large, long *n_holes)
{
long index, start = -1;
*empty = 0;
*large = 0;
*n_holes = 0;
for (index = 0; index < N; index++)
{
if (start < 0 && get_rec(index) == FREE)
{
start = index;
}
if (start >= 0)
{
if (get_rec(index) == FREE)
{
*empty += 1;
}
else
{
*n_holes += 1;
if (*large < index - start)
*large = index - start;
start = -1;
}
}
}
if (start >= 0)
{
*n_holes += 1;
if (*large < N - start)
*large = N - start;
}
}
bool lemur::file::Keyfile::get( const char* key, void* value, int& actualSize,
int maxSize ) const {
assert( key && "key cannot be null" );
assert( value && "value cannot be null" );
assert( _handle && "call open() or create() first" );
assert( maxSize > 0 && "maxSize must be positive" );
int len = strlen(key); // fix for UTF-8
int error = get_rec( _handle, const_cast<char*>(key), len,
(char*)value, &actualSize, maxSize );
if( error && error != getnokey_err )
LEMUR_THROW( LEMUR_KEYFILE_IO_ERROR, "Caught an internal error while getting record for key: " + key );
return error != getnokey_err;
}
STATIC void lf_audit(const char *fn, unsigned line, Node_s *node)
{
Hrec_s rec;
int free = BLOCK_SIZE - SZ_HEAD;
int i;
for (i = 0; i < node->numrecs; i++) {
rec = get_rec(node, i);
free -= rec.val.size + LEAF_OVERHEAD;
}
if (free != node->free) {
printf("%s<%d> free:%d != %d:node->free\n",
fn, line, free, node->free);
exit(2);
}
}
int build (char *ref_name, char *target_path, int k_mer, double error_rate, char *prefix)
{
char *position = mmaping (ref_name);
bloom *bl = NEW (bloom);
if (k_mer != 0)
bl->k_mer = k_mer;
else
bl->k_mer = kmer_suggestion (get_size (ref_name));
bl->stat.e = error_rate;
bl->dx = bl->k_mer*bl->k_mer;
bl->stat.capacity = strlen (position);
get_rec (&bl->stat);
bloom_init (bl, bl->stat.elements, bl->stat.capacity, bl->stat.e, bl->stat.ideal_hashes, NULL, 3);
ref_add (bl, position);
save_bloom (ref_name, bl, prefix, target_path);
return 0;
}
void pr_mem_node(Node_s *node)
{
int i;
printf("blknum %lld overflow %lld",
(u64)node->blknum,
(u64)node->overflow);
printf(" numrecs %d free %d end %d\n",
node->numrecs, node->free, node->end);
for (i = 0; i < node->numrecs; i++) {
printf(" %d", node->rec[i]);
}
printf("\n");
for (i = 0; i < node->numrecs; i++) {
Hrec_s rec = get_rec(node, i);
printf("%lld %d %s\n",
(u64)rec.key, rec.val.size,
(char *)rec.val.d);
}
}
void prg2txt (FILE *in, FILE *out, char *fname, int lowercase)
{
Addy_type start_addy;
Basrec_type rec;
char oline [MAXLINE];
int x;
if (get_addy (in, &start_addy) == EOF
|| start_addy.whole_addy != START_ADDY)
exit_wrong_fmt (fname);
get_rec_len (ADDY_NULL);
while (! (x = get_rec (in, &rec)))
if (detoken (&rec, oline, MAXLINE, lowercase))
fprintf (out, "%u %s\n", rec.line_num.whole_addy, oline);
if (x == EOF) exit_wrong_fmt (fname);
return;
}
NcValues* NcVar::get_rec(long rec)
{
return get_rec(get_dim(0), rec);
}
NcValues* NcVar::get_rec(void)
{
return get_rec(get_dim(0), cur_rec[0]);
}
STATIC void lf_rec_move(Node_s *dst, int i, Node_s *src, int j)
{
Hrec_s rec = get_rec(src, j);
store_rec(dst, rec.key, rec.val, i);
lf_del_rec(src, j);
}
