void PiecewiseLinearDiscontinuousScalarSpaceBarycentric<BasisFunctionType>::dumpClusterIdsEx(
const char* fileName,
const std::vector<unsigned int>& clusterIdsOfDofs,
DofType dofType) const
{
// Note: this will probably only work for spaces on full grids
// (not on segments)
if (dofType != GLOBAL_DOFS && dofType != FLAT_LOCAL_DOFS)
throw std::invalid_argument("PiecewiseLinearDiscontinuousScalarSpaceBarycentricScalarSpace::"
"dumpClusterIds(): invalid DOF type");
const size_t idCount = clusterIdsOfDofs.size();
if ((dofType == GLOBAL_DOFS && idCount != globalDofCount()) ||
(dofType == FLAT_LOCAL_DOFS && idCount != flatLocalDofCount()))
throw std::invalid_argument("PiecewiseLinearDiscontinuousScalarSpaceBarycentricScalarSpace::"
"dumpClusterIds(): incorrect dimension");
std::auto_ptr<VtkWriter> vtkWriter = this->gridView().vtkWriter();
if (dofType == GLOBAL_DOFS) {
arma::Row<double> data(idCount);
for (size_t i = 0; i < idCount; ++i)
data(i) = clusterIdsOfDofs[i];
vtkWriter->addVertexData(data, "ids");
vtkWriter->write(fileName);
} else {
arma::Mat<double> data(idCount, globalDofCount());
data.fill(0.);
size_t row = 0;
for (size_t id = 0; id < idCount; ++id) {
bool exists = false;
for (size_t fldof = 0; fldof < idCount; ++fldof) {
if (clusterIdsOfDofs[fldof] == id) {
LocalDof ldof = m_flatLocal2localDofs[fldof];
GlobalDofIndex gdof = m_local2globalDofs[ldof.entityIndex][ldof.dofIndex];
data(row, gdof) = 1;
exists = true;
}
}
if (!exists)
data.shed_row(row); // very inefficient, of course
else
++row;
}
std::cout << "about to write" <<std::endl;
vtkWriter->addVertexData(data, "ids");
vtkWriter->write(fileName);
}
}
void PiecewiseLinearDiscontinuousScalarSpace<BasisFunctionType>::
dumpClusterIdsEx(const char *fileName,
const std::vector<unsigned int> &clusterIdsOfDofs,
DofType dofType) const {
if (dofType != GLOBAL_DOFS && dofType != FLAT_LOCAL_DOFS)
throw std::invalid_argument("PiecewiseLinearDiscontinuousScalarSpace::"
"dumpClusterIds(): invalid DOF type");
const size_t idCount = clusterIdsOfDofs.size();
if ((dofType == GLOBAL_DOFS && idCount != globalDofCount()) ||
(dofType == FLAT_LOCAL_DOFS && idCount != flatLocalDofCount()))
throw std::invalid_argument("PiecewiseLinearDiscontinuousScalarSpace::"
"dumpClusterIds(): incorrect dimension");
std::unique_ptr<GridView> view = this->grid()->leafView();
std::unique_ptr<VtkWriter> vtkWriter = view->vtkWriter();
Matrix<double> data(idCount, globalDofCount());
data.setZero();
size_t row = 0;
for (size_t id = 0; id < idCount; ++id) {
bool exists = false;
for (size_t fldof = 0; fldof < idCount; ++fldof) {
if (clusterIdsOfDofs[fldof] == id) {
LocalDof ldof = m_flatLocal2localDofs[fldof];
GlobalDofIndex gdof =
m_local2globalDofs[ldof.entityIndex][ldof.dofIndex];
data(row, gdof) = 1;
exists = true;
}
}
if (!exists)
eigenRemoveRowFromMatrix(data, row); // very inefficient, of course
else
++row;
}
std::cout << "about to write" << std::endl;
vtkWriter->addVertexData(data, "ids");
vtkWriter->write(fileName);
}
void PiecewiseLinearDiscontinuousScalarSpaceBarycentric<BasisFunctionType>::getGlobalDofNormals(
std::vector<Point3D<CoordinateType> >& normals) const
{
const int gridDim = this->domainDimension();
const int globalDofCount_ = globalDofCount();
const int worldDim = this->grid()->dimWorld();
normals.resize(globalDofCount_);
const IndexSet& indexSet = this->gridView().indexSet();
int elementCount = this->gridView().entityCount(0);
arma::Mat<CoordinateType> elementNormals(worldDim, elementCount);
std::auto_ptr<EntityIterator<0> > it = this->gridView().template entityIterator<0>();
arma::Col<CoordinateType> center(gridDim);
center.fill(0.5);
arma::Col<CoordinateType> normal;
while (!it->finished()) {
const Entity<0>& e = it->entity();
int index = indexSet.entityIndex(e);
e.geometry().getNormals(center, normal);
for (int dim = 0; dim < worldDim; ++dim)
elementNormals(dim, index) = normal(dim);
it->next();
}
if (gridDim == 1)
for (size_t g = 0; g < globalDofCount_; ++g) {
normals[g].x = 0.;
normals[g].y = 0.;
for (size_t l = 0; l < m_global2localDofs[g].size(); ++l) {
normals[g].x += elementNormals(0, m_global2localDofs[g][l].entityIndex);
normals[g].y += elementNormals(1, m_global2localDofs[g][l].entityIndex);
}
normals[g].x /= m_global2localDofs[g].size();
normals[g].y /= m_global2localDofs[g].size();
}
else // gridDim == 2
for (size_t g = 0; g < globalDofCount_; ++g) {
normals[g].x = 0.;
normals[g].y = 0.;
for (size_t l = 0; l < m_global2localDofs[g].size(); ++l) {
normals[g].x += elementNormals(0, m_global2localDofs[g][l].entityIndex);
normals[g].y += elementNormals(1, m_global2localDofs[g][l].entityIndex);
normals[g].z += elementNormals(2, m_global2localDofs[g][l].entityIndex);
}
normals[g].x /= m_global2localDofs[g].size();
normals[g].y /= m_global2localDofs[g].size();
normals[g].z /= m_global2localDofs[g].size();
}
}
void PiecewiseLinearDiscontinuousScalarSpaceBarycentric<BasisFunctionType>::
getFlatLocalDofBoundingBoxes(
std::vector<BoundingBox<CoordinateType> >& bboxes) const
{
// TODO: extract this loop into a private function
const IndexSet& indexSet = this->gridView().indexSet();
const int elementCount = this->gridView().entityCount(0);
std::vector<arma::Mat<CoordinateType> > elementCorners(elementCount);
std::auto_ptr<EntityIterator<0> > it = this->gridView().template entityIterator<0>();
while (!it->finished()) {
const Entity<0>& e = it->entity();
int index = indexSet.entityIndex(e);
const Geometry& geo = e.geometry();
geo.getCorners(acc(elementCorners, index));
it->next();
}
BoundingBox<CoordinateType> model;
const CoordinateType maxCoord = std::numeric_limits<CoordinateType>::max();
model.lbound.x = model.lbound.y = model.lbound.z = maxCoord;
model.ubound.x = model.ubound.y = model.ubound.z = -maxCoord;
const int flatLocalDofCount_ = m_flatLocal2localDofs.size();
bboxes.resize(flatLocalDofCount_, model);
for (int i = 0; i < flatLocalDofCount_; ++i) {
const LocalDof& localDof = acc(m_flatLocal2localDofs, i);
BoundingBox<CoordinateType>& bbox = acc(bboxes, i);
extendBoundingBox(bbox, acc(elementCorners, localDof.entityIndex));
setBoundingBoxReference<CoordinateType>(
bbox,
acc(elementCorners, localDof.entityIndex).col(
localDof.dofIndex));
}
#ifndef NDEBUG
const int globalDofCount_ = globalDofCount();
for (size_t i = 0; i < globalDofCount_; ++i) {
assert(bboxes[i].reference.x >= bboxes[i].lbound.x);
assert(bboxes[i].reference.y >= bboxes[i].lbound.y);
assert(bboxes[i].reference.z >= bboxes[i].lbound.z);
assert(bboxes[i].reference.x <= bboxes[i].ubound.x);
assert(bboxes[i].reference.y <= bboxes[i].ubound.y);
assert(bboxes[i].reference.z <= bboxes[i].ubound.z);
}
#endif // NDEBUG
}
void PiecewiseConstantDiscontinuousScalarSpaceBarycentric<
BasisFunctionType>::dumpClusterIdsEx(const char *fileName,
const std::vector<unsigned int> &
clusterIdsOfGlobalDofs,
DofType dofType) const {
if (dofType != GLOBAL_DOFS && dofType != FLAT_LOCAL_DOFS)
throw std::invalid_argument(
"PiecewiseConstantDiscontinuousScalarSpaceBarycentric::"
"dumpClusterIds(): invalid DOF type");
const size_t idCount = clusterIdsOfGlobalDofs.size();
if ((dofType == GLOBAL_DOFS && idCount != globalDofCount()) ||
(dofType == FLAT_LOCAL_DOFS && idCount != flatLocalDofCount()))
throw std::invalid_argument("PiecewiseConstantDiscontinuousScalarSpaceBaryc"
"entric::dumpClusterIds(): "
"clusterIds has incorrect length");
std::unique_ptr<GridView> view = this->grid()->leafView();
std::unique_ptr<VtkWriter> vtkWriter = view->vtkWriter();
arma::Row<double> data(idCount);
for (size_t i = 0; i < idCount; ++i)
data(i) = clusterIdsOfGlobalDofs[i];
vtkWriter->addCellData(data, "ids");
vtkWriter->write(fileName);
}
size_t
PiecewiseLinearDiscontinuousScalarSpace<BasisFunctionType>::flatLocalDofCount()
const {
return globalDofCount();
}
