C++ (Cpp) gt_feature_node_new_standard_gene Beispiele

Beispiel #1

Datei: diagram.c Projekt: AlexWoroschilow/uni_hamburg

int gt_diagram_unit_test(GtError *err)
{
  int had_err = 0;
  GtGenomeNode *gn;
  GtDiagramTestShared sh;
  GtRange testrng = {100, 10000};
  gt_error_check(err);

  gn = gt_feature_node_new_standard_gene();
  sh.fi = gt_feature_index_memory_new();
  sh.sty = gt_style_new(err);
  sh.err = err;
  sh.errstatus = 0;
  gt_feature_index_add_feature_node(sh.fi, gt_feature_node_cast(gn), err);
  gt_genome_node_delete(gn);
  sh.d = gt_diagram_new(sh.fi, "ctg123", &testrng, sh.sty, err);

  /* removed the multithreading test for now until it is fixed */
  gt_diagram_unit_test_sketch_func(&sh);
  gt_ensure(sh.errstatus == 0);

  gt_style_delete(sh.sty);
  gt_diagram_delete(sh.d);
  gt_feature_index_delete(sh.fi);

  return had_err;
}

Beispiel #2

Datei: feature_node_iterator.c Projekt: 9beckert/TIR

int gt_feature_node_iterator_example(GT_UNUSED GtError *err)
{
  GtFeatureNodeIterator *fni;
  GtFeatureNode *fn, *node;
  fn = (GtFeatureNode*) gt_feature_node_new_standard_gene();

  /* an example genome node iterator use case */
  fni = gt_feature_node_iterator_new(fn);
  while ((node = gt_feature_node_iterator_next(fni))) {
    /* do something with <node> */
  }
  gt_feature_node_iterator_delete(fni);

  gt_genome_node_delete((GtGenomeNode*) fn);
  return 0;
}