int opt2(t_specs opt, char *c, int *i, char **str)
{
if (*str[0] == 0)
{
if (!(opt.flags & 0x04))
{
*str = treat_options(*str, opt, c[*i], 1);
ft_putstr(*str);
}
ft_putchar(0);
if (opt.flags & 0x04)
{
*str = treat_options(*str, opt, c[*i], 1);
ft_putstr(*str);
}
(*i)++;
return (ft_strlen(*str) + 1);
}
else
*str = treat_options(*str, opt, c[*i], 0);
return (0);
}
int main( int argc, char *argv[] ) {
int argindex = treat_options( argc, argv );
if( argindex != argc - 2 ){
perr( "You must provide two filenames as arguments\n" );
usage();
}
perr( "Reading input profiles into hashmap...\n" );
read_profiles_file( argv[ argindex + 1 ] );
perr( "Generalizing...\n" );
sim_file = open_file_read( argv[ argindex ] );
sim_index = get_index_column_name( sim_file, score_name );
if( sim_index < 4 ) {
fprintf( stderr, "Column named \"%s\" not found!\nYou must ", score_name );
perr( "specify a valid -s option. Chose among SIM-FILE column headers.\n");
perr( "Remember that the 1st 4 fields cannot be used as scores.\n" );
usage();
}
if( nb_threads > 1 ) {
run_multi_threaded( &read_sim_and_generalize, nb_threads );
}
else {
perr( "Not using threads\n" );
read_sim_and_generalize_serial();
}
// Clean and free to avoid memory leaks
perr( "Finished, cleaning up...\n" );
fclose( sim_file );
g_hash_table_destroy( c_dict );
g_hash_table_destroy( t_dict );
if( t_filter ) {
g_hash_table_destroy( t_filter );
}
if( n_filter ) {
g_hash_table_destroy( n_filter );
}
if( c_filter ) {
g_hash_table_destroy( c_filter );
}
return 0;
}
