int main(int argc,char **argv)
{
char ofile[255];
int j,res;
if(argc==1)
{
printf("\nUse:asm85 [option] <filename>");
printf("\noptions:");
printf("\n-o <file> - Give the output filename");
printf("\n-s Show the machine opcode table");
printf("\n-i Enter opcodes into opcode table");
printf("\nDefault mot file is mot.dat");
printf("\n");
return EXIT_SUCCESS;
}
if(argc>=2)
{
int flag=1;
j=strcmp(*(argv+1),"-o");
if(j==0)
{
flag=0;
if(*(argv+2)==NULL)
{
printf("\nYou must specify an output file");
return EXIT_SUCCESS;
}
else
strcpy(ofile,*(argv+2));
if(*(argv+3)==NULL)
{
printf("\nasm85: no input files specified");
return EXIT_SUCCESS;
}
strcpy(filename,*(argv+3));
}
j=strcmp(*(argv+1),"-s");
if(j==0)
{
char *file[]={"sdf","mot.dat"};
flag=0;
disp(2,&file);
exit(EXIT_SUCCESS);
}
j=strcmp(*(argv+1),"-i");
if(j==0)
{
char *file[]={"df","mot.dat"};
flag=0;
input(2,&file);
exit(EXIT_SUCCESS);
}
if(flag)
{
strcpy(filename,*(argv+1));
strcpy(ofile,"c:\\outfile.txt");
}
}
else
{
strcpy(filename,*(argv+1));
strcpy(ofile,"c:\\outfile.txt");
}
pass1();
pass2();
/*ASSEMBLING DONE, WRITE THE OUPUT FILES */
res=writeoutfile(ofile);
if(res==1)
{
fprintf(stderr,"\nAn error occur while writing to output file");
return EXIT_FAILURE;
}
else
printf("\nOutput written to %s",ofile);
return EXIT_SUCCESS;
}
void IMT_MRGui::readcalcwrite_thread()
{
unsigned int num_rows = 0;
unsigned int num_columns = 0;
unsigned int num_coils = 0;
std::vector<TType_data> matrix_read;
std::vector<TType_image> image_data;
QString name_index;
unsigned short int acq, sli, par, echo, pha, rep, set, seg;
unsigned short int acq_info, sli_info, par_info, echo_info, pha_info, rep_info, set_info, seg_info;
std::vector<INDEX_select> index_vector;
int error = 0;
matrix_read.clear(); //clear all elements
image_data.clear(); //clear all elements
_seconds = time (NULL);
if( ((read_siemens == 0) && !_readmatlab) || (_readmatlab && (_matlab_num_rows == 0)))
{
emit sendInfo("Load Data first!", false);
emit sendWarning("Load Data first!");
}
else
{
if(!_readmatlab)
read_siemens->getRawdata_info(num_rows, num_columns, num_coils, acq_info, sli_info, par_info, echo_info,
pha_info, rep_info, set_info, seg_info);
else
{
num_rows = _matlab_num_rows;
num_columns = _matlab_num_columns;
num_coils = _matlab_num_coils;
}
if(ui->cb_cropFOV->isChecked() == true)
{
_num_rows_calc = num_rows;
_num_columns_calc = num_rows;
}
else
{
_num_rows_calc = num_rows;
_num_columns_calc = num_columns;
}
if(!_readmatlab)
generate_idx(read_siemens, index_vector);
for(int i=0; i<_num_columns_calc*_num_rows_calc; ++i)
zero_vec_cpu_.push_back(TType_real(0));
matrix_read.reserve(2*_num_columns_data*_num_rows_data*_num_coils_data);
image_data.reserve(_num_columns_calc*_num_rows_calc);
if(!_readmatlab)
{
for(int i=0; i<index_vector.size();++i) //get threw all user-selected idx
{
// endselect = setcheckindex(read_siemens, acq, sli, par, echo, pha, rep, set, seg );
acq = index_vector[i].acq;
sli = index_vector[i].sli;
par = index_vector[i].par;
echo = index_vector[i].echo;
pha = index_vector[i].pha;
rep = index_vector[i].rep;
set = index_vector[i].set;
seg = index_vector[i].seg;
qDebug() <<"\n\nactual selection: "<<sli<<" "<< acq<<" "<< rep<<" "<< par<<" "<< echo<<" "<< pha<<" "<< set<<" "<< seg;
if (ui->combo_seg_select->currentText() == "All")
{
for(int i=0; i<= seg_info;++i)
{
read_siemens->getRawdata(matrix_read,acq, sli, par, echo, pha, rep, set, i);
}
}
else
{
read_siemens->getRawdata(matrix_read,acq, sli, par, echo, pha, rep, set, seg);
}
// TEST READ
//agile::readMatrixFile3D("brain_151x256x6.bin", num_rows, num_columns, num_coils, matrix_read);
//agile::readMatrixFile3D("braindata.bin", num_rows, num_columns, num_coils, matrix_read);
QString str_acq, str_sli, str_par, str_echo, str_pha, str_rep, str_set, str_seg;
str_acq.setNum(acq);
str_sli.setNum(sli);
str_par.setNum(par);
str_echo.setNum(echo);
str_pha.setNum(pha);
str_rep.setNum(rep);
str_set.setNum(set);
str_seg.setNum(seg);
_infotext.append("\n===================\n");
//_strselection = "===================\n";
_infotext.append("| "+str_sli+" - "+str_acq+" - "+str_par+" - "+str_echo+" - "+str_pha+" - "+str_rep+" - "
+str_set+" - "+str_seg+" |");
_infotext.append("\n-------------------------------------");
error = startcalculation(_num_rows_calc, _num_columns_calc, _num_coils_data, matrix_read, image_data);
if(error == 0)
{
time_t timet=time (NULL);
unsigned time = unsigned(timet) - unsigned(_seconds);
QString str_time;
str_time.setNum(time);
_infotext.append("\nFinished in "+str_time+"sec\n");
}
if(error != 0)
std::cerr<<"\n Calculation Error - nb: "<<error;
else
{
unsigned dummy=0;
std::ostringstream filename;
filename <<std::setfill ('0') << std::setw (4)<<_write_file_index
<<std::setfill ('0') << std::setw (2)<<dummy
<<std::setfill ('0') << std::setw (2)<<ui->cb_savingtype->currentIndex()+1
<<std::setfill ('0') << std::setw (2)<<sli
<<std::setfill ('0') << std::setw (2)<<echo
<<std::setfill ('0') << std::setw (2)<<dummy
<<std::setfill ('0') << std::setw (2)<<acq;
// filename << "_"<<std::setfill ('0') << std::setw (4)<<sli
// <<std::setfill ('0') << std::setw (4)<<acq
// <<std::setfill ('0') << std::setw (4)<<par
// <<std::setfill ('0') << std::setw (4)<<echo
// <<std::setfill ('0') << std::setw (4)<<pha
// <<std::setfill ('0') << std::setw (4)<<rep
// <<std::setfill ('0') << std::setw (4)<<set
// <<std::setfill ('0') << std::setw (4)<<seg;
name_index = (filename.str().c_str());
writeoutfile(_num_rows_calc, _num_columns_calc, _num_coils_data, image_data, matrix_read,name_index);
_write_file_index++;
}
}
}
else
{
QString path = _pathsetting->get_matlabpath() +"/"+ _outfilename+".bin";
agile::readMatrixFile3D(path.toStdString().c_str(), num_rows, num_columns, num_coils, matrix_read);
//qDebug()<<"\n path: "<<path<<" size: "<<matrix_read.size();
_infotext.append("\n===================");
error = startcalculation(_num_rows_calc, _num_columns_calc, _num_coils_data, matrix_read, image_data);
if(error == 0)
{
time_t timet=time (NULL);
unsigned time = unsigned(timet) - unsigned(_seconds);
QString str_time;
str_time.setNum(time);
_infotext.append("\nFinished in "+str_time+"sec\n");
}
if(error != 0)
std::cerr<<"\n Calculation Error - nb: "<<error;
else
{
unsigned dummy=0;
std::ostringstream filename;
filename <<std::setfill ('0') << std::setw (4)<<_write_file_index
<<std::setfill ('0') << std::setw (2)<<dummy
<<std::setfill ('0') << std::setw (2)<<ui->cb_savingtype->currentIndex()+1
<<std::setfill ('0') << std::setw (2)<<sli
<<std::setfill ('0') << std::setw (2)<<echo
<<std::setfill ('0') << std::setw (2)<<dummy
<<std::setfill ('0') << std::setw (2)<<acq;
// filename << "_"<<std::setfill ('0') << std::setw (4)<<sli
// <<std::setfill ('0') << std::setw (4)<<acq
// <<std::setfill ('0') << std::setw (4)<<par
// <<std::setfill ('0') << std::setw (4)<<echo
// <<std::setfill ('0') << std::setw (4)<<pha
// <<std::setfill ('0') << std::setw (4)<<rep
// <<std::setfill ('0') << std::setw (4)<<set
// <<std::setfill ('0') << std::setw (4)<<seg;
name_index = (filename.str().c_str());
writeoutfile(_num_rows_calc, _num_columns_calc, _num_coils_data, image_data, matrix_read,name_index);
_write_file_index++;
}
}
if(error==0)
{
if(_pathsetting->get_archiveactive())
copytoarchive();
emit sendInfo(_infotext,false);
_act_index++;
}
else
{
_infotext.append("\nError\n");
emit sendInfo(_infotext,false);
}
if(_automatic_on == true)
_cycleread_thread->cycle_read(_pathsetting->get_dcmrawpath());
}
}
