void MetricNamesRep::setColoredTextList(std::vector<std::pair<QColor, QString> > text, Eigen::Array2d pos, vtkViewport *vp)
{
mDisplayText.clear();
if (vp==0)
{
vp = this->getRenderer();
}
// if (vp==0)
// {
// return;
// }
DoubleBoundingBox3D bb;
bb = this->findNormalizedBoundingBoxAroundText(text, pos, vp);
double meanHeight = bb.range()[1]/text.size();
for (unsigned i=0; i<text.size(); ++i)
{
TextDisplayPtr rep;
rep.reset( new TextDisplay( text[i].second, text[i].first, mFontSize) );
rep->textProperty()->SetJustificationToLeft();
rep->getActor()->GetPositionCoordinate()->SetCoordinateSystemToNormalizedViewport();
Vector3D currentPos = bb.bottomLeft() + (meanHeight*i)*Eigen::Vector3d::UnitY();
rep->setPosition(currentPos);
rep->setRenderer(this->getRenderer());
mDisplayText.push_back(rep);
}
}
void Rect3D::updatePosition(const DoubleBoundingBox3D bb, const Transform3D& M)
{
mPoints = vtkPointsPtr::New();
mPoints->InsertPoint(0, M.coord(bb.corner(0,0,0)).begin());
mPoints->InsertPoint(1, M.coord(bb.corner(0,1,0)).begin());
mPoints->InsertPoint(2, M.coord(bb.corner(1,1,0)).begin());
mPoints->InsertPoint(3, M.coord(bb.corner(1,0,0)).begin());
mPolyData->SetPoints(mPoints);
}
std::vector<int> InteractiveCropper::getDimensions()
{
std::vector<int> dimensions;
if(!mImage)
return dimensions;
double spacing_x = 1;
double spacing_y = 1;
double spacing_z = 1;
mImage->getBaseVtkImageData()->GetSpacing(spacing_x, spacing_y, spacing_z);
DoubleBoundingBox3D bb = getBoxWidgetSize();
int dim_x = (bb.begin()[1] - bb.begin()[0])/spacing_x + 1; //adding 1 because of some rounding errors, is there a better way to do this?
int dim_y = (bb.begin()[3] - bb.begin()[2])/spacing_y + 1;
int dim_z = (bb.begin()[5] - bb.begin()[4])/spacing_z + 1;
dimensions.push_back(dim_x);
dimensions.push_back(dim_y);
dimensions.push_back(dim_z);
return dimensions;
}
/**Normalize volume defined by in to volume defined by out.
*
* This is intended for creating transforms from one viewport to another, i.e.
* the two boxes should be aligned and differ only in translation + scaling.
*/
Transform3D createTransformNormalize(const DoubleBoundingBox3D& in, const DoubleBoundingBox3D& out)
{
// translate input bottomleft to origin, scale, translate back to output bottomleft.
Transform3D T0 = createTransformTranslate(-in.bottomLeft());
Vector3D inrange = in.range();
Vector3D outrange = out.range();
Vector3D scale;
// check for zero input dimensions
for (unsigned i = 0; i < scale.size(); ++i)
{
if (fabs(inrange[i]) < 1.0E-5)
scale[i] = 0;
else
scale[i] = outrange[i] / inrange[i];
}
Transform3D S = createTransformScale(scale);
Transform3D T1 = createTransformTranslate(out.bottomLeft());
Transform3D M = T1 * S * T0;
return M;
}
/** Initialize the volue parameters with sensible defaults.
*/
OutputVolumeParams::OutputVolumeParams(DoubleBoundingBox3D extent, double inputSpacing, double maxVolumeSize) :
mInputSpacing(inputSpacing), mMaxVolumeSize(maxVolumeSize), mValid(false)
{
mImage.setSpacingKeepDim(Eigen::Array3d(inputSpacing, inputSpacing, inputSpacing));
mImage.setDimKeepBoundsAlignSpacing(extent.range());
this->constrainVolumeSize();
if(mImage.getDim().minCoeff() <= 1) //At least one of the dimensions <= 1
mValid = false;
else
mValid = true;
}
Vector3D CustomMetric::getScale() const
{
if (!mScaleToP1 || !this->getModel() || this->getModel()->getType() == "image")
return Vector3D::Ones();
DoubleBoundingBox3D bounds = this->getModel()->boundingBox();
bounds = transform(this->getModel()->get_rMd(), bounds);
std::vector<Vector3D> coords = mArguments->getRefCoords();
double height = (coords[1] - coords[0]).length();
Vector3D dir = this->getDirection();
double p0 = dot(coords[0], dir);
double p1 = dot(coords[1], dir);
height = p1 - p0;
height -= (mOffsetFromP0 + mOffsetFromP1);
Vector3D scale(1,
height/bounds.range()[1],
1);
return scale;
}
DoubleBoundingBox3D DoubleBoundingBox3D::unionWith(const DoubleBoundingBox3D& other) const
{
std::vector<Vector3D> cloud;
cloud.push_back(corner(0,0,0));
cloud.push_back(other.corner(0,0,0));
cloud.push_back(corner(0,0,1));
cloud.push_back(other.corner(0,0,1));
cloud.push_back(corner(0,1,0));
cloud.push_back(other.corner(0,1,0));
cloud.push_back(corner(0,1,1));
cloud.push_back(other.corner(0,1,1));
cloud.push_back(corner(1,0,0));
cloud.push_back(other.corner(1,0,0));
cloud.push_back(corner(1,0,1));
cloud.push_back(other.corner(1,0,1));
cloud.push_back(corner(1,1,0));
cloud.push_back(other.corner(1,1,0));
cloud.push_back(corner(1,1,1));
cloud.push_back(other.corner(1,1,1));
return fromCloud(cloud);
}
bool similar(const DoubleBoundingBox3D& a, const DoubleBoundingBox3D& b, double tol)
{
return similar(a.bottomLeft(), b.bottomLeft(), tol) && similar(a.topRight(), b.topRight(), tol);
}
/**Transform bb using the transform m.
* Only the two defining corners are actually transformed.
*/
DoubleBoundingBox3D transform(const Transform3D& m, const DoubleBoundingBox3D& bb)
{
Vector3D a = m.coord(bb.bottomLeft());
Vector3D b = m.coord(bb.topRight());
return DoubleBoundingBox3D(a, b);
}