//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This is an incredibly rudimentary function used to modify landslide raster
// It takes a few rasters from the
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDSoilHydroRaster::NaiveLandslide(LSDRaster& FilledElevation, int initiationPixels,
int MinPixels, float landslide_thickness)
{
// Get a flow info object
// set no flux boundary conditions
vector<string> boundary_conditions(4);
boundary_conditions[0] = "No";
boundary_conditions[1] = "no flux";
boundary_conditions[2] = "no flux";
boundary_conditions[3] = "No flux";
// some values from the rasters
float local_elev;
float local_mask;
// get a flow info object
LSDFlowInfo FlowInfo(boundary_conditions,FilledElevation);
// get the contributing pixels
LSDIndexRaster ContributingPixels = FlowInfo.write_NContributingNodes_to_LSDIndexRaster();
vector<int> sources = FlowInfo.get_sources_index_threshold(ContributingPixels, initiationPixels);
// get a value vector for the landslides
vector<float> landslide_thicknesses;
for (int i = 0; i< int(sources.size()); i++)
{
landslide_thicknesses.push_back(landslide_thickness);
}
// get the mask
LSDRaster Mask = FlowInfo.get_upslope_node_mask(sources,landslide_thicknesses);
// now set all points that have elevation data but not landslide data to
// the value of the landslide thickness, removing data that is below the minium
// pixel area
for (int row = 0; row<NRows; row++)
{
for (int col = 0; col<NCols; col++)
{
local_elev = FilledElevation.get_data_element(row,col);
local_mask = Mask.get_data_element(row,col);
RasterData[row][col] = local_mask;
// Turn nodata points into 0s
if( local_mask == NoDataValue)
{
RasterData[row][col] = 0.0;
}
// remove data where there is no topographic information
if( local_elev == NoDataValue)
{
RasterData[row][col] = NoDataValue;
}
}
}
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
// Calculate w, a hyrdological index, used in the factor of safety equation.
// Call with the ratio of recharge to transmissivity.
// SWDG 13/6/16
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
LSDSoilHydroRaster LSDSoilHydroRaster::Calculate_w(LSDRaster& Slope, LSDRaster& DrainageArea){
Array2D<float> w(NRows, NCols, NoDataValue);
for (int i = 1; i < NRows - 1; ++i){
for (int j = 1; j < NCols - 1; ++j){
if (RasterData[i][j] != NoDataValue){
float value = RasterData[i][j] * (DrainageArea.get_data_element(i,j)/sin(Slope.get_data_element(i,j)));
if (value < 1.0){
w[i][j] = value;
}
else{
w[i][j] = 1.0;
}
}
}
}
LSDSoilHydroRaster output(NRows,NCols,XMinimum,YMinimum,DataResolution,NoDataValue,w,GeoReferencingStrings);
return output;
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This prints a chi map to csv with an area threshold in m^2
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDChiTools::chi_map_to_csv(LSDFlowInfo& FlowInfo, string chi_map_fname,
float A_0, float m_over_n, float area_threshold)
{
ofstream chi_map_csv_out;
chi_map_csv_out.open(chi_map_fname.c_str());
chi_map_csv_out.precision(9);
float chi_coord;
double latitude,longitude;
LSDCoordinateConverterLLandUTM Converter;
chi_map_csv_out << "latitude,longitude,chi" << endl;
LSDRaster Chi = FlowInfo.get_upslope_chi_from_all_baselevel_nodes(m_over_n, A_0, area_threshold);
float NDV = Chi.get_NoDataValue();
for(int row = 0; row<NRows; row++)
{
for(int col = 0; col<NCols; col++)
{
chi_coord = Chi.get_data_element(row,col);
if (chi_coord != NDV)
{
get_lat_and_long_locations(row, col, latitude, longitude, Converter);
chi_map_csv_out << latitude << "," << longitude << "," << chi_coord << endl;
}
}
}
chi_map_csv_out.close();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=---=-=-=-=-=-=-=-=-=-=-=-=-
// This function prints a chan file for assimilation into the chi analysis,
// but in this cases uses a discharge rather than a drainage area
//
// the file format is
// channel_number node_index node_on_reciever row column flow_dist elevation drainage_area
//
// SMM 07/05/2015
//
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
void LSDIndexChannelTree::print_LSDChannels_for_chi_network_ingestion(LSDFlowInfo& FlowInfo,
LSDRaster& Elevation_Raster, LSDRaster& FlowDistance, string fname,
LSDRaster& Discharge)
{
if (organization_switch != 1)
{
cout << "LSDIndexChannelTree you can't run LSDIndexChannelTree::retrieve_LSDChannels_from_tree" << endl;
cout << "with this channel organization, organization switch: " << organization_switch << endl;
exit(EXIT_FAILURE);
}
// open the outfile
ofstream channelfile_out;
channelfile_out.open(fname.c_str());
channelfile_out.precision(10);
float m_over_n = 0.5;
float A_0 = 1;
// get the vector of channels
vector<LSDChannel> vector_of_channels = retrieve_LSDChannels_from_tree(m_over_n, A_0, FlowInfo,Elevation_Raster);
int n_channels = vector_of_channels.size();
int n_nodes_in_channel;
int node,row,col;
float elev,chi,drain_area,flow_dist,this_discharge;
// first print out some data about the dem
channelfile_out << get_NRows() << endl;
channelfile_out << get_NCols() << endl;
channelfile_out << get_XMinimum() << endl;
channelfile_out << get_YMinimum() << endl;
channelfile_out << get_DataResolution() << endl;
channelfile_out << get_NoDataValue() << endl;
//loop through the channels
for (int i = 0; i< n_channels; i++)
{
// get the number of nodes in the channel
n_nodes_in_channel =IndexChannelVector[i].get_n_nodes_in_channel();
// now loop through the channel, printing out the data.
for(int ch_node= 0; ch_node<n_nodes_in_channel; ch_node++)
{
IndexChannelVector[i].get_node_row_col_in_channel(ch_node, node, row, col);
vector_of_channels[i].retrieve_node_information(ch_node, elev, chi, drain_area);
flow_dist = FlowDistance.get_data_element(row,col);
this_discharge = Discharge.get_data_element(row,col);
// print data to file
channelfile_out << i << " " << receiver_channel[i] << " " << node_on_receiver_channel[i] << " "
<< node << " " << row << " " << col << " " << flow_dist << " "
<< " " << elev << " " << this_discharge << endl;
}
}
channelfile_out.close();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=---=-=-=-=-=-=-=-=-=-=-=-=-
// Same as above but also reports the discharge
//
// SMM 06/05/2015
//
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDIndexChannelTree::convert_chan_file_for_ArcMap_ingestion(string fname, LSDRaster& DrainageArea, LSDRaster& Discharge)
{
// open the outfile
ifstream channelfile_in;
channelfile_in.open(fname.c_str());
unsigned dot = fname.find_last_of(".");
string prefix = fname.substr(0,dot);
//string suffix = str.substr(dot);
string insert = "_for_Arc.csv";
string outfname = prefix+insert;
cout << "the Arc channel filename is: " << outfname << endl;
ofstream ArcChan_out;
ArcChan_out.open(outfname.c_str());
ArcChan_out.precision(10);
// print the first line of the arcchan. This is going to be comma seperated!
ArcChan_out << "id,x,y,channel,reciever_channel,node_on_reciever_channel,node,row,col,flow_distance_m,elevation_m,drainage_area_m2,discharge_m2_times_precipunits" << endl;
// now go throught the file, collecting the data
int id,ch,rc,norc,n,r,c;
float fd,elev,da;
float x,y;
float xll;
float yll;
float datares;
float ndv;
int nrows;
int ncols;
float this_discharge;
float this_da;
// read in the first lines with DEM information
channelfile_in >> nrows >> ncols >> xll >> yll >> datares >> ndv;
id = 0;
// now loop through the file, calculating x and y locations as you go
while(channelfile_in >> ch >> rc >> norc >> n >> r >> c >> fd >> elev >> da)
{
id++;
x = xll + float(c)*datares + 0.5*datares;
y = yll + float(nrows-r)*datares - 0.5*datares; // this is because the DEM starts from the top corner
this_discharge = Discharge.get_data_element(r,c);
this_da = DrainageArea.get_data_element(r,c);
ArcChan_out << id << "," << x << "," << y << "," << ch << "," << rc
<< "," << norc << "," << n << "," << r << "," << c << ","
<< fd << "," << elev << "," << this_da << "," << this_discharge << endl;
}
channelfile_in.close();
ArcChan_out.close();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// Create function that takes the dimensions and georeferencing of a raster
// but then sets all data to value, setting the NoDataValues to
// the NoData of the raster
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDSoilHydroRaster::create(LSDRaster& OtherRaster, float value)
{
NRows = OtherRaster.get_NRows();
NCols = OtherRaster.get_NCols();
XMinimum = OtherRaster.get_XMinimum();
YMinimum = OtherRaster.get_YMinimum();
DataResolution = OtherRaster.get_DataResolution();
NoDataValue = OtherRaster.get_NoDataValue();
GeoReferencingStrings = OtherRaster.get_GeoReferencingStrings();
// set the raster data to be a certain value
Array2D<float> data(NRows,NCols,NoDataValue);
for (int row = 0; row <NRows; row++)
{
for (int col = 0; col<NCols; col++)
{
if (OtherRaster.get_data_element(row,col) != NoDataValue)
{
data[row][col] = value;
//cout << value << endl;
}
}
}
RasterData = data.copy();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
// Calculate the the sinmap Stability Index (SI).
// This is a wrapper around a lightly modified port of the original sinmap 2.0 implementation.
// call with any SoilHydroRaster, it's values are used for identification of NoDataValues.
//
// SWDG 15/6/16
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
LSDSoilHydroRaster LSDSoilHydroRaster::Calculate_sinmap_SI(LSDRaster Slope, LSDRaster DrainageArea, LSDSoilHydroRaster lo_C, LSDSoilHydroRaster hi_C, LSDSoilHydroRaster lo_phi, LSDSoilHydroRaster hi_phi, LSDSoilHydroRaster lo_RoverT, LSDSoilHydroRaster hi_RoverT, LSDSoilHydroRaster lo_r, LSDSoilHydroRaster hi_r, LSDSoilHydroRaster lo_FS, LSDSoilHydroRaster hi_FS){
Array2D<float> SI(NRows, NCols, NoDataValue);
for (int i = 1; i < NRows - 1; ++i){
for (int j = 1; j < NCols - 1; ++j){
if (RasterData[i][j] != NoDataValue){
SI[i][j] = StabilityIndex(Slope.get_data_element(i, j), DrainageArea.get_data_element(i, j), lo_C.get_data_element(i, j), hi_C.get_data_element(i, j), lo_phi.get_data_element(i, j), hi_phi.get_data_element(i, j), lo_RoverT.get_data_element(i, j), hi_RoverT.get_data_element(i, j), lo_r.get_data_element(i, j), hi_r.get_data_element(i, j), lo_FS.get_data_element(i, j), hi_FS.get_data_element(i, j));
}
}
}
LSDSoilHydroRaster output(NRows,NCols,XMinimum,YMinimum,DataResolution,NoDataValue,SI,GeoReferencingStrings);
return output;
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// Create function that just copies a raster into the hydro raster
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDSoilHydroRaster::create(LSDRaster& OtherRaster)
{
NRows = OtherRaster.get_NRows();
NCols = OtherRaster.get_NCols();
XMinimum = OtherRaster.get_XMinimum();
YMinimum = OtherRaster.get_YMinimum();
DataResolution = OtherRaster.get_DataResolution();
NoDataValue = OtherRaster.get_NoDataValue();
GeoReferencingStrings = OtherRaster.get_GeoReferencingStrings();
RasterData = OtherRaster.get_RasterData();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// Creates an LSDChiTools from an LSDRaster
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDChiTools::create(LSDRaster& ThisRaster)
{
NRows = ThisRaster.get_NRows();
NCols = ThisRaster.get_NCols();
XMinimum = ThisRaster.get_XMinimum();
YMinimum = ThisRaster.get_YMinimum();
DataResolution = ThisRaster.get_DataResolution();
NoDataValue = ThisRaster.get_NoDataValue();
GeoReferencingStrings = ThisRaster.get_GeoReferencingStrings();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
//
// Create function that reads from a raster
//
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDRasterInfo::create(LSDRaster& Raster)
{
///Number of rows.
NRows = Raster.get_NRows();
NCols = Raster.get_NCols();
XMinimum = Raster.get_XMinimum();
YMinimum = Raster.get_YMinimum();
DataResolution = Raster.get_DataResolution();
NoDataValue = Raster.get_NoDataValue();
GeoReferencingStrings = Raster.get_GeoReferencingStrings();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This function calculates a snow thickenss (effective, in g cm^-2 for cosmogenic
// applications) based on a bilinear model such as that of P Kirchner: http://escholarship.org/uc/item/9zn1c1mk#page-8
// The paper is here: http://www.hydrol-earth-syst-sci.net/18/4261/2014/hess-18-4261-2014.html
// This paper also agrees withy this general trend:
// http://www.the-cryosphere.net/8/2381/2014/tc-8-2381-2014.pdf
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDSoilHydroRaster::SetSnowEffDepthBilinear(float SlopeAscend, float SlopeDescend,
float PeakElevation, float PeakSnowpack, LSDRaster& Elevation)
{
float LocalElevation;
float ascendEffDepth;
float descendEffDepth;
float thisEffDepth = 0;
for (int row = 0; row <NRows; row++)
{
for (int col = 0; col<NCols; col++)
{
if (RasterData[row][col] != NoDataValue)
{
LocalElevation = Elevation.get_data_element(row,col);
if (LocalElevation != NoDataValue)
{
// get the effective depth on both the ascending and descending limb
ascendEffDepth = SlopeAscend*(LocalElevation-PeakElevation)+PeakSnowpack;
descendEffDepth = SlopeDescend*(LocalElevation-PeakElevation)+PeakSnowpack;
// the correct depth is the lesser of the two
if (ascendEffDepth < descendEffDepth)
{
thisEffDepth = ascendEffDepth;
}
else
{
thisEffDepth = descendEffDepth;
}
// if the depth is less than zero, then set to zero
if(thisEffDepth <0)
{
thisEffDepth = 0;
}
RasterData[row][col] = thisEffDepth;
}
else // if there ins't any elevation data, set the snow data to NoData
{
RasterData[row][col] = NoDataValue;
}
}
}
}
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This prints a chi map to csv with an area threshold in m^2. You feed it the chi map
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDChiTools::chi_map_to_csv(LSDFlowInfo& FlowInfo, string chi_map_fname,
LSDRaster& chi_coord)
{
ofstream chi_map_csv_out;
chi_map_csv_out.open(chi_map_fname.c_str());
float this_chi_coord;
double latitude,longitude;
LSDCoordinateConverterLLandUTM Converter;
chi_map_csv_out << "latitude,longitude,chi" << endl;
float NDV = chi_coord.get_NoDataValue();
for(int row = 0; row<NRows; row++)
{
for(int col = 0; col<NCols; col++)
{
this_chi_coord = chi_coord.get_data_element(row,col);
if (this_chi_coord != NDV)
{
get_lat_and_long_locations(row, col, latitude, longitude, Converter);
chi_map_csv_out.precision(9);
chi_map_csv_out << latitude << "," << longitude << ",";
chi_map_csv_out.precision(5);
chi_map_csv_out << this_chi_coord << endl;
}
}
}
chi_map_csv_out.close();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This function calculates a snow thickenss (effective, in g cm^-2 for cosmogenic
// applications) based on a richard's equsion sigmoidal growth model
// It was propoesd to represent peak SWE so we cruedly apply it to average annual SWE
// see
// http://onlinelibrary.wiley.com/doi/10.1002/2015GL063413/epdf
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDSoilHydroRaster::SetSnowEffDepthRichards(float MaximumEffDepth, float MaximumSlope, float v,
float lambda, LSDRaster& Elevation)
{
// Don't let V be less than or equal to zero
if (v <= 0)
{
v = 0.001;
}
// some variables to speed up compuation
float exp_term;
float thisEffDepth = 0;
float elev_mulitplier = (MaximumSlope/MaximumEffDepth)*pow((1+v),1+(1/v));
float LocalElevation;
for (int row = 0; row <NRows; row++)
{
for (int col = 0; col<NCols; col++)
{
if (RasterData[row][col] != NoDataValue)
{
LocalElevation = Elevation.get_data_element(row,col);
if (LocalElevation != NoDataValue)
{
// get the effective depth using the richards sigmoidal gorth function
exp_term = 1+v*exp(elev_mulitplier*(lambda-LocalElevation));
thisEffDepth = MaximumEffDepth*pow(exp_term,-(1/v));
// if the depth is less than zero, then set to zero
if(thisEffDepth <0)
{
thisEffDepth = 0;
}
// update the data
RasterData[row][col] = thisEffDepth;
}
else // if there ins't any elevation data, set the snow data to NoData
{
RasterData[row][col] = NoDataValue;
}
}
}
}
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
// Calculate the factor of safety using the sinmap definition.
// Call with the dimensionless cohesion (C) raster.
// SWDG 13/6/16
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
LSDSoilHydroRaster LSDSoilHydroRaster::Calculate_sinmap_Fs(LSDRaster& Slope, LSDSoilHydroRaster& w, LSDSoilHydroRaster& r, LSDSoilHydroRaster& phi){
Array2D<float> Fs(NRows, NCols, NoDataValue);
for (int i = 1; i < NRows - 1; ++i){
for (int j = 1; j < NCols - 1; ++j){
if (RasterData[i][j] != NoDataValue){
Fs[i][j] = ( RasterData[i][j] + cos(Slope.get_data_element(i,j)) * (1.0-w.get_data_element(i,j)*r.get_data_element(i,j)) * tan(phi.get_data_element(i,j)) ) / sin(Slope.get_data_element(i,j));
}
}
}
LSDSoilHydroRaster output(NRows,NCols,XMinimum,YMinimum,DataResolution,NoDataValue,Fs,GeoReferencingStrings);
return output;
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
// Calculate h, the soil depth normal to the slope, used in the factor of safety equation.
// Call with the soil thickness raster.
// SWDG 13/6/16
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
LSDSoilHydroRaster LSDSoilHydroRaster::Calculate_h(LSDRaster& Slope){
Array2D<float> h(NRows, NCols, NoDataValue);
for (int i = 1; i < NRows - 1; ++i){
for (int j = 1; j < NCols - 1; ++j){
if (RasterData[i][j] != NoDataValue){
h[i][j] = RasterData[i][j] * cos(Slope.get_data_element(i,j));
}
}
}
LSDSoilHydroRaster output(NRows,NCols,XMinimum,YMinimum,DataResolution,NoDataValue,h,GeoReferencingStrings);
return output;
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
// this function prints chi values. It is used on the channel tree when channels are organized by links
// (that is organization switch == 0
//
// SMM 01/09/2012
//
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
void LSDIndexChannelTree::print_chi_vs_elevation_from_channel_tree(LSDRaster& Elevation, LSDFlowInfo& FlowInfo, LSDJunctionNetwork& ChannelNetwork,
float m_over_n, float A_0, string chi_vs_elev_fname)
{
if(organization_switch != 0)
{
cout << "LSDIndexChannelTree you can't run LSDIndexChannelTree::print_chi_vs_elevation_from_channel_tree with this channel organization" << endl;
exit(EXIT_FAILURE);
}
int n_channels = IndexChannelVector.size();
int n_nodes_in_link,current_node_index;
vector< vector<float> > chi_vectors = calculate_chi_from_channel_tree(FlowInfo, ChannelNetwork,
m_over_n, A_0);
// the chi iterator
vector< vector<float> >::iterator chi_iter;
chi_iter = chi_vectors.begin();
float current_chi;
float current_elev;
int curr_row,curr_col;
ofstream chi_elev_out;
chi_elev_out.open(chi_vs_elev_fname.c_str());
for (int i = 0; i<n_channels; i++)
{
n_nodes_in_link = IndexChannelVector[i].get_n_nodes_in_channel();
for (int this_node = 0; this_node<n_nodes_in_link; this_node++)
{
current_node_index = IndexChannelVector[i].get_node_in_channel(this_node);
current_chi = (*chi_iter)[this_node];
FlowInfo.retrieve_current_row_and_col(current_node_index,curr_row,curr_col);
current_elev = Elevation.get_data_element(curr_row,curr_col);
//cout << "current_node: " << current_node_index << " and chi: " << current_chi << endl;
//chi_elev_out << current_chi << " " << current_elev << endl;
}
chi_iter++;
}
chi_elev_out.close();
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=---=-=-=-=-=-=-=-=-=-=-=-=-
// this function prints chi and elevation, along with flow distance and the
// number of the tributary it all goes to one file
//
// the file format is
// channel_number node_index row column flow_dist chi elevation drainage_area
//
// SMM 01/09/2012
//
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDIndexChannelTree::print_LSDChannels_from_tree(float m_over_n, float A_0, LSDFlowInfo& FlowInfo,
LSDRaster& Elevation_Raster, LSDRaster& FlowDistance, string fname)
{
if (organization_switch != 1)
{
cout << "LSDIndexChannelTree you can't run LSDIndexChannelTree::retrieve_LSDChannels_from_tree" << endl;
cout << "with this channel organization, organization switch: " << organization_switch << endl;
exit(EXIT_FAILURE);
}
// open the outfile
ofstream channelfile_out;
channelfile_out.open(fname.c_str());
// get the vector of channels
vector<LSDChannel> vector_of_channels = retrieve_LSDChannels_from_tree(m_over_n, A_0, FlowInfo,Elevation_Raster);
int n_channels = vector_of_channels.size();
int n_nodes_in_channel;
int node,row,col;
float elev,chi,drain_area,flow_dist;
//loop through the channels
for (int i = 0; i< n_channels; i++)
{
// get the number of nodes in the channel
n_nodes_in_channel =IndexChannelVector[i].get_n_nodes_in_channel();
// now loop through the channel, printing out the data.
for(int ch_node= 0; ch_node<n_nodes_in_channel; ch_node++)
{
IndexChannelVector[i].get_node_row_col_in_channel(ch_node, node, row, col);
vector_of_channels[i].retrieve_node_information(ch_node, elev, chi, drain_area);
flow_dist = FlowDistance.get_data_element(row,col);
// print data to file
channelfile_out << i << " " << node << " " << row << " " << col << " " << flow_dist << " "
<< chi << " " << elev << " " << drain_area << endl;
}
}
channelfile_out.close();
}
int main(int nNumberofArgs, char *argv[])
{
//Test for correct input arguments
if (nNumberofArgs!=5)
{
cout << "FATAL ERROR: wrong number of inputs. The program needs the path (with trailing slash), the filename prefix, the DEM file format, the window size in spatial units.";
exit(EXIT_FAILURE);
}
//get input args
string path = argv[1];
string Prefix = argv[2];
string DEM_Format = argv[3];
int WindowSize = atoi(argv[4]);
//surface fitting
vector<int> raster_selection;
raster_selection.push_back(0);
raster_selection.push_back(1); //slope
raster_selection.push_back(0);
raster_selection.push_back(1); //curvature
//set up a writer to write the output data
ofstream WriteData;
//create an output filename based on the dem name
stringstream ss;
ss << path << Prefix << "_ChtResData.txt";
WriteData.open(ss.str().c_str());
//write headers
WriteData << "resoulution 2pc 25pc median mean 75pc 98pc minimum maximum" << endl;
//array of resolutions to load
int Resolutions[] = {1, 2, 3, 4, 5, 6, 7, 8, 9, 10};
// vectors to hold the stats about the fitted surface
vector<float> Curv_vec;
//set boundary conditions
vector<string> BoundaryConditions(4, "No Flux");
for (int a = 0; a < 10; ++a){
cout << "Processing DEM " << a+1 << " of " << "10" << endl;
//load the DEM
//build the string of the filename to load
stringstream ss2;
ss2 << path << Prefix << "_" << Resolutions[a] << "_DEM";
LSDRaster DEM(ss2.str(), DEM_Format);
//Fill
float MinSlope = 0.0001;
LSDRaster FilledDEM = DEM.fill(MinSlope);
int CurrentWindowSize = WindowSize;
vector<LSDRaster> Surfaces = FilledDEM.calculate_polyfit_surface_metrics(CurrentWindowSize, raster_selection);
// get a flow info object
LSDFlowInfo FlowInfo(BoundaryConditions,FilledDEM);
//get stream net from channel heads
vector<int> sources = FlowInfo.Ingest_Channel_Heads((path+Prefix+"_CH"), "csv", 2);
LSDJunctionNetwork ChanNetwork(sources, FlowInfo);
// extract hilltops
LSDRaster hilltops = ChanNetwork.ExtractRidges(FlowInfo);
LSDRaster Hilltops = ChanNetwork.ExtractHilltops(hilltops, Surfaces[1], 0.4);
//get hilltop curvature using filter to remove positive curvatures
LSDRaster cht_raster = FilledDEM.get_hilltop_curvature(Surfaces[3], Hilltops);
LSDRaster CHT = FilledDEM.remove_positive_hilltop_curvature(cht_raster);
//go through the landscape and get every curvature value into a 1D vector
Curv_vec = Flatten_Without_Nodata(CHT.get_RasterData(), CHT.get_NoDataValue());
stringstream ss3;
ss3 << path << Prefix << "_" << Resolutions[a] << "_Hist_CHT.txt";
print_histogram(Curv_vec, 0.01, ss3.str());
vector<float> Boxplot = BoxPlot(Curv_vec);
//write the values to the output file
WriteData << Resolutions[a] << " " << Boxplot[0] << " " << Boxplot[1] << " " << Boxplot[2] << " " << Boxplot[3] << " " << Boxplot[4] << " " << Boxplot[5] << " " << Boxplot[6] << " " << Boxplot[7];
WriteData << endl;
}
WriteData.close();
}
int main (int nNumberofArgs,char *argv[])
{
//Test for correct input arguments
if (nNumberofArgs!=7)
{
cout << "FATAL ERROR: wrong number of inputs. The program needs the path (with trailing slash), the filename prefix, the DEM file format, the window radius, ";
cout << "basin order, and a switch to write rasters if desired." << endl;
exit(EXIT_SUCCESS);
}
//load input arguments
string Path = argv[1];
string Prefix = argv[2];
string DEM_Format = argv[3];
float window_radius = atof(argv[4]); //6
int BasinOrder = atoi(argv[5]); //2
int WriteRasters = atoi(argv[6]); //0 (do not write rasters) or 1 (write rasters)
//set up writers to write the output data
stringstream ssLH;
stringstream ssR;
ssLH << Path << Prefix << "_LHResData_variable.txt";
ssR << Path << Prefix << "_RResData_variable.txt";
ofstream WriteLHData;
WriteLHData.open(ssLH.str().c_str());
ofstream WriteRData;
WriteRData.open(ssR.str().c_str());
//write headers
WriteLHData << "resolution 2pc 25pc median mean 75pc 98pc minimum maximum" << endl;
WriteRData << "resolution 2pc 25pc median mean 75pc 98pc minimum maximum" << endl;
//set boundary conditions
vector<string> BoundaryConditions(4, "No Flux");
//array of resolutions to load
int Resolutions[] = {2, 3, 4, 5, 6, 7, 8, 9, 10, 12, 14, 16, 18, 20, 22, 24, 26, 28, 30};
for (int a = 0; a < 19; ++a){
cout << "Processing DEM " << a+1 << " of " << "19" << endl;
//create an output filename based on the dem name and the resolution
stringstream ss;
ss << Path << Prefix << "_" << Resolutions[a];
string Filename = ss.str();
//load dem
LSDRaster DEM((Filename + "_DEM"), DEM_Format);
stringstream ssa;
ssa << Path << Prefix << "_" << Resolutions[a] << "_variable";
string Filename_variable = ssa.str();
//Fill
float MinSlope = 0.0001;
LSDRaster FilledDEM = DEM.fill(MinSlope);
//surface fitting
vector<int> raster_selection;
raster_selection.push_back(0);
raster_selection.push_back(1); //slope
raster_selection.push_back(1); //aspect
raster_selection.push_back(1); //curvature
raster_selection.push_back(1); //plan curvature
raster_selection.push_back(0);
raster_selection.push_back(0);
raster_selection.push_back(0);
int CurrentWindowSize = window_radius;
vector<LSDRaster> Surfaces = FilledDEM.calculate_polyfit_surface_metrics(CurrentWindowSize, raster_selection);
LSDRaster slope = Surfaces[1];
LSDRaster aspect = Surfaces[2];
cout << "\nGetting drainage network and basins\n" << endl;
// get a flow info object
LSDFlowInfo FlowInfo(BoundaryConditions,FilledDEM);
//get stream net from channel heads
stringstream ss_ch;
ss_ch << Path << "Pelletier/" << Prefix << "_" << Resolutions[a] << "_CH";
vector<int> sources = FlowInfo.Ingest_Channel_Heads(ss_ch.str(), "bil");
LSDJunctionNetwork ChanNetwork(sources, FlowInfo);
LSDIndexRaster StreamNetwork = ChanNetwork.StreamOrderArray_to_LSDIndexRaster();
//Extract basins based on input stream order
vector< int > basin_junctions = ChanNetwork.ExtractBasinJunctionOrder(BasinOrder, FlowInfo);
LSDIndexRaster Basin_Raster = ChanNetwork.extract_basins_from_junction_vector(basin_junctions, FlowInfo);
cout << "\nExtracting hilltops and hilltop curvature" << endl;
// extract hilltops - no critical slope filtering is performed here
LSDRaster hilltops = ChanNetwork.ExtractRidges(FlowInfo);
//get hilltop curvature using filter to remove positive curvatures
LSDRaster cht_raster = FilledDEM.get_hilltop_curvature(Surfaces[3], hilltops);
LSDRaster CHT = FilledDEM.remove_positive_hilltop_curvature(cht_raster);
cout << "Starting hilltop flow routing\n" << endl;
// these params do not need changed during normal use of the HFR algorithm
bool print_paths_switch = false;
int thinning = 1;
string trace_path = "";
bool basin_filter_switch = false;
vector<int> Target_Basin_Vector;
//run HFR
vector< Array2D<float> > HFR_Arrays = FlowInfo.HilltopFlowRouting(FilledDEM, hilltops, slope, StreamNetwork, aspect, Filename_variable, Basin_Raster, Surfaces[4], print_paths_switch, thinning, trace_path, basin_filter_switch, Target_Basin_Vector);
LSDRaster HFR_LH = hilltops.LSDRasterTemplate(HFR_Arrays[1]);
LSDRaster relief = hilltops.LSDRasterTemplate(HFR_Arrays[3]);
//Filter Relief and LH data to remove any values < 2 pixels, as in Grieve et al (2015)
LSDRaster LH1 = HFR_LH.RemoveBelow(2.0*Resolutions[a]);
LSDRaster Relief1 = relief.RemoveBelow(2.0*Resolutions[a]);
//Filter Relief and LH data to remove any values > 10000
//These are created due to using 1m channel heads on low res data, and inadvertantly
//sampling nodata values, which gives us massive relief values
LSDRaster LH = LH1.RemoveAbove(10000);
LSDRaster Relief = Relief1.RemoveAbove(10000);
//go through the lh raster and get every value into a 1D vector
vector<float> LH_vec = Flatten_Without_Nodata(LH.get_RasterData(), LH.get_NoDataValue());
vector<float> Boxplot = BoxPlot(LH_vec);
//write the values to the output file
WriteLHData << Resolutions[a] << " " << Boxplot[0] << " " << Boxplot[1] << " " << Boxplot[2] << " " << Boxplot[3] << " " << Boxplot[4] << " " << Boxplot[5] << " " << Boxplot[6] << " " << Boxplot[7];
WriteLHData << endl;
stringstream ss3;
ss3 << Path << Prefix << "_" << Resolutions[a] << "_Hist_LH_variable.txt";
print_histogram(LH_vec, 1, ss3.str());
//go through the relief raster and get every value into a 1D vector
vector<float> R_vec = Flatten_Without_Nodata(Relief.get_RasterData(), Relief.get_NoDataValue());
vector<float> Boxplot_R = BoxPlot(R_vec);
//write the values to the output file
WriteRData << Resolutions[a] << " " << Boxplot_R[0] << " " << Boxplot_R[1] << " " << Boxplot_R[2] << " " << Boxplot_R[3] << " " << Boxplot_R[4] << " " << Boxplot_R[5] << " " << Boxplot_R[6] << " " << Boxplot_R[7];
WriteRData << endl;
stringstream ss4;
ss4 << Path << Prefix << "_" << Resolutions[a] << "_Hist_R_variable.txt";
print_histogram(R_vec, 1, ss4.str());
//if the user requests the rasters to be written, write the rasters
if (WriteRasters == 1){
cout << "Writing Rasters\n" << endl;
Surfaces[1].write_raster((Filename + "_Slope_variable"), DEM_Format);
CHT.write_raster((Filename + "_CHT_variable"), DEM_Format);
LH.write_raster((Filename + "_HFR_LH_variable"), DEM_Format);
Relief.write_raster((Filename + "_Relief_variable"), DEM_Format);
}
}
WriteLHData.close();
WriteRData.close();
}
int main (int nNumberofArgs,char *argv[])
{
//Test for correct input arguments
if (nNumberofArgs!=7)
{
cout << "FATAL ERROR: wrong number of inputs. The program needs the path (with trailing slash), the filename prefix, window radius, ";
cout << "basin order, a switch to use or exclude floodplains and a switch to write rasters if desired." << endl;
exit(EXIT_SUCCESS);
}
//load input arguments
string path = argv[1];
string filename = argv[2];
float window_radius = atof(argv[3]); //6
int BasinOrder = atoi(argv[4]); //2
int FloodplainSwitch = atoi(argv[5]);
int WriteRasters = atoi(argv[6]); //0 (do not write rasters) or 1 (write rasters)
//set boundary conditions
vector<string> BoundaryConditions(4, "No Flux");
//load dem
LSDRaster DEM((path+filename+"_dem"), "flt");
//Fill
float MinSlope = 0.0001;
LSDRaster FilledDEM = DEM.fill(MinSlope);
//surface fitting
vector<int> raster_selection;
raster_selection.push_back(0);
raster_selection.push_back(1); //slope
raster_selection.push_back(1); //aspect
raster_selection.push_back(1); //curvature
raster_selection.push_back(1); //plan curvature
raster_selection.push_back(0);
raster_selection.push_back(0);
raster_selection.push_back(0);
vector<LSDRaster> Surfaces = FilledDEM.calculate_polyfit_surface_metrics(window_radius, raster_selection);
LSDRaster slope = Surfaces[1];
LSDRaster aspect = Surfaces[2];
cout << "\nGetting drainage network and basins\n" << endl;
// get a flow info object
LSDFlowInfo FlowInfo(BoundaryConditions,FilledDEM);
//get stream net from channel heads
vector<int> sources = FlowInfo.Ingest_Channel_Heads((path+filename+"_dem_CH"), "flt"); //swap to csv?
LSDJunctionNetwork ChanNetwork(sources, FlowInfo);
LSDIndexRaster StreamNetwork = ChanNetwork.StreamOrderArray_to_LSDIndexRaster();
//load floodplain and merge with the channel network if required, otherwise the
//floodplain mask will only contain the channel data
LSDIndexRaster ChannelAndFloodplain;
if (FloodplainSwitch == 1){
LSDIndexRaster Floodplains((path+filename+"_FloodPlain"), "flt");
ChannelAndFloodplain = StreamNetwork.MergeChannelWithFloodplain(Floodplains);
}
else{
ChannelAndFloodplain = StreamNetwork;
}
//Extract basins based on input stream order
vector< int > basin_junctions = ChanNetwork.ExtractBasinJunctionOrder(BasinOrder, FlowInfo);
LSDIndexRaster Basin_Raster = ChanNetwork.extract_basins_from_junction_vector(basin_junctions, FlowInfo);
cout << "\nExtracting hilltops and hilltop curvature" << endl;
// extract hilltops - no critical slope filtering is performed here
LSDRaster hilltops = ChanNetwork.ExtractRidges(FlowInfo);
//get hilltop curvature using filter to remove positive curvatures
LSDRaster cht_raster = FilledDEM.get_hilltop_curvature(Surfaces[3], hilltops);
LSDRaster CHT = FilledDEM.remove_positive_hilltop_curvature(cht_raster);
//get d infinity flowdirection and flow area
Array2D<float> dinf = FilledDEM.D_inf_FlowDir();
LSDRaster dinf_rast = FilledDEM.LSDRasterTemplate(dinf);
LSDRaster DinfArea = FilledDEM.D_inf_units();
cout << "Starting hilltop flow routing\n" << endl;
//start of Hilltop flow routing
string prefix = (path+filename+"_dreich_"); //set a path to write the hillslope length data to, based on the input path and filename given by the user
// these params do not need changed during normal use of the HFR algorithm
bool print_paths_switch = false;
int thinning = 1;
string trace_path = "";
bool basin_filter_switch = false;
vector<int> Target_Basin_Vector;
//run HFR
vector< Array2D<float> > HFR_Arrays = FlowInfo.HilltopFlowRouting(FilledDEM, hilltops, slope, ChannelAndFloodplain, aspect, prefix, Basin_Raster, Surfaces[4], print_paths_switch, thinning, trace_path, basin_filter_switch, Target_Basin_Vector);
LSDRaster HFR_LH = hilltops.LSDRasterTemplate(HFR_Arrays[1]);
LSDRaster HFR_Slope = hilltops.LSDRasterTemplate(HFR_Arrays[2]);
LSDRaster relief = hilltops.LSDRasterTemplate(HFR_Arrays[3]);
//end of HFR
//create lsdbasin objects in a loop over each junction number
vector< LSDBasin > Basins;
//slope area plotting parameters - these defaults are usually fine
float log_bin_width = 0.1;
int SplineResolution = 10000;
int bin_threshold = 0;
float CriticalSlope = 1.2; //this needs modified to generate proper E*R* data
cout << "\nCreating each LSDBasin" << endl;
//loop over each basin, generating an LSDBasin object which contains that basin's measurements
for (int w = 0; w < int(basin_junctions.size()); ++w){
cout << (w+1) << " / " << basin_junctions.size() << endl;
LSDBasin Basin(basin_junctions[w], FlowInfo, ChanNetwork);
Basin.set_FlowLength(StreamNetwork, FlowInfo);
Basin.set_DrainageDensity();
Basin.set_all_HillslopeLengths(FlowInfo, HFR_LH, slope, DinfArea, log_bin_width, SplineResolution, bin_threshold);
Basin.set_SlopeMean(FlowInfo, slope);
Basin.set_AspectMean(FlowInfo, aspect);
Basin.set_ElevationMean(FlowInfo, FilledDEM);
Basin.set_ReliefMean(FlowInfo, relief);
Basin.set_CHTMean(FlowInfo, CHT);
Basin.set_EStar_RStar(CriticalSlope);
Basins.push_back(Basin);
}
//create a filestream to write the output data
// use the input arguments to generate a path and filename for the output file
ofstream WriteData;
stringstream ss;
ss << path << filename << "_dreich_PaperData.txt";
WriteData.open(ss.str().c_str());
//write headers
WriteData << "BasinID HFR_mean HFR_median HFR_stddev HFR_stderr HFR_Nvalues HFR_range HFR_min HFR_max SA_binned_LH SA_Spline_LH LH_Density Area Basin_Slope_mean Basin_Slope_median Basin_Slope_stddev Basin_Slope_stderr Basin_Slope_Nvalues Basin_Slope_range Basin_Slope_min Basin_Slope_max Basin_elev_mean Basin_elev_median Basin_elev_stddev Basin_elev_stderr Basin_elev_Nvalues Basin_elev_Range Basin_elev_min Basin_elev_max Aspect_mean CHT_mean CHT_median CHT_stddev CHT_stderr CHT_Nvalues CHT_range CHT_min CHT_max EStar RStar HT_Slope_mean HT_Slope_median HT_Slope_stddev HT_Slope_stderr HT_Slope_Nvalues HT_Slope_range HT_Slope_min HT_Slope_max HT_relief_mean HT_relief_median HT_relief_stddev HT_relief_stderr HT_relief_Nvalues HT_relief_range HT_relief_min HT_relief_max" << endl;
cout << "\nWriting data to file\n" << endl;
//write all data to the opened file, ensuring that there are data points to be written in each basin
for (int q = 0; q < int(Basins.size()); ++q){
// only work where we have data points
if (Basins[q].CalculateNumDataPoints(FlowInfo, HFR_LH) != 0 && Basins[q].CalculateNumDataPoints(FlowInfo, slope) != 0 && Basins[q].CalculateNumDataPoints(FlowInfo, FilledDEM) != 0 && Basins[q].CalculateNumDataPoints(FlowInfo, CHT) != 0 && Basins[q].CalculateNumDataPoints(FlowInfo, HFR_Slope) != 0 && Basins[q].CalculateNumDataPoints(FlowInfo, relief) != 0){
// BasinID
WriteData << Basins[q].get_Junction()<< " ";
//HFR
WriteData << Basins[q].get_HillslopeLength_HFR() << " " << Basins[q].CalculateBasinMedian(FlowInfo, HFR_LH) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, HFR_LH) << " " << Basins[q].CalculateBasinStdError(FlowInfo, HFR_LH) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, HFR_LH) << " " << Basins[q].CalculateBasinRange(FlowInfo, HFR_LH) << " " << Basins[q].CalculateBasinMin(FlowInfo, HFR_LH) << " " << Basins[q].CalculateBasinMax(FlowInfo, HFR_LH)<< " ";
//SA_Bins
WriteData << Basins[q].get_HillslopeLength_Binned()<< " ";
//SA_Spline
WriteData << Basins[q].get_HillslopeLength_Spline()<< " ";
//Density
WriteData << Basins[q].get_HillslopeLength_Density()<< " ";
//Area
WriteData << Basins[q].get_Area()<< " ";
//Slope_Basin
WriteData << Basins[q].get_SlopeMean() << " " << Basins[q].CalculateBasinMedian(FlowInfo, slope) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, slope) << " " << Basins[q].CalculateBasinStdError(FlowInfo, slope) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, slope) << " " << Basins[q].CalculateBasinRange(FlowInfo, slope) << " " << Basins[q].CalculateBasinMin(FlowInfo, slope) << " " << Basins[q].CalculateBasinMax(FlowInfo, slope)<< " ";
//Elev_Basin
WriteData << Basins[q].get_ElevationMean() << " " << Basins[q].CalculateBasinMedian(FlowInfo, FilledDEM) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, FilledDEM) << " " << Basins[q].CalculateBasinStdError(FlowInfo, FilledDEM) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, FilledDEM) << " " << Basins[q].CalculateBasinRange(FlowInfo, FilledDEM) << " " << Basins[q].CalculateBasinMin(FlowInfo, FilledDEM) << " " << Basins[q].CalculateBasinMax(FlowInfo, FilledDEM)<< " ";
//Aspect_Basin
WriteData << Basins[q].get_AspectMean()<< " ";
//CHT
WriteData << Basins[q].get_CHTMean() << " " << Basins[q].CalculateBasinMedian(FlowInfo, CHT) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, CHT) << " " << Basins[q].CalculateBasinStdError(FlowInfo, CHT) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, CHT) << " " << Basins[q].CalculateBasinRange(FlowInfo, CHT) << " " << Basins[q].CalculateBasinMin(FlowInfo, CHT) << " " << Basins[q].CalculateBasinMax(FlowInfo, CHT) << " ";
//EStar
WriteData << Basins[q].get_EStar()<< " ";
//RStar
WriteData << Basins[q].get_RStar()<< " ";
//Slope_mean
WriteData << Basins[q].CalculateBasinMean(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinMedian(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinStdError(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinRange(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinMin(FlowInfo, HFR_Slope) << " " << Basins[q].CalculateBasinMax(FlowInfo, HFR_Slope)<< " ";
//Relief_mean
WriteData << Basins[q].get_ReliefMean() << " " << Basins[q].CalculateBasinMedian(FlowInfo, relief) << " " << Basins[q].CalculateBasinStdDev(FlowInfo, relief) << " " << Basins[q].CalculateBasinStdError(FlowInfo, relief) << " " << Basins[q].CalculateNumDataPoints(FlowInfo, relief) << " " << Basins[q].CalculateBasinRange(FlowInfo, relief) << " " << Basins[q].CalculateBasinMin(FlowInfo, relief) << " " << Basins[q].CalculateBasinMax(FlowInfo, relief)<< "\n";
}
}
// close the output file
WriteData.close();
//if the user requests the raster to be written, write the rasters
if (WriteRasters == 1){
cout << "Writing Rasters\n" << endl;
// FilledDEM.write_raster((path+filename+"_Fill"), "flt");
Surfaces[1].write_raster((path+filename+"_dreich_Slope"),"flt");
//Surfaces[2].write_raster((path+filename+"_Aspect"),"flt");
//Surfaces[3].write_raster((path+filename+"_Curvature"),"flt");
//StreamNetwork.write_raster((path+filename+"_STNET"), "flt");
//Basin_Raster.write_raster((path+filename+"_Basins"), "flt");
CHT.write_raster((path+filename+"_dreich_CHT"),"flt");
HFR_LH.write_raster((path+filename+"_dreich_HFR_LH"),"flt");
HFR_Slope.write_raster((path+filename+"_dreich_HFR_SLP"),"flt");
relief.write_raster((path+filename+"_dreich_Relief"),"flt");
//perform a hillshade
//LSDRaster Hillshade = FilledDEM.hillshade(45.0,315.0,1.0);
//Hillshade.write_raster((path+filename+"_HS"),"flt");
}
}
int main (int nNumberofArgs,char *argv[])
{
//Test for correct input arguments
if (nNumberofArgs!=3)
{
cout << "FATAL ERROR: wrong number inputs. The program needs the path name and the file name" << endl;
exit(EXIT_SUCCESS);
}
string path_name = argv[1];
// make sure there is a slash on the end of the file
string lchar = path_name.substr(path_name.length()-2,1);
string slash = "/";
if (lchar != slash)
{
cout << "You forgot the frontslash at the end of the path. Appending." << endl;
path_name = path_name+slash;
}
string f_name = argv[2];
cout << "\nYou are running the write junctions driver." << endl
<<"IMPORTANT: this has been updated to load an ENVI DEM, whith extension .bil" << endl
<<"You can convert your DEM to this file format using gdal_translate, with -of ENVI" << endl
<<"See documentation at: http://www.geos.ed.ac.uk/~smudd/LSDTT_docs/html/gdal_notes.html" << endl << endl;
cout << "The path is: " << path_name << " and the filename is: " << f_name << endl;
string full_name = path_name+f_name;
ifstream file_info_in;
file_info_in.open(full_name.c_str());
if( file_info_in.fail() )
{
cout << "\nFATAL ERROR: the header file \"" << full_name
<< "\" doesn't exist" << endl;
exit(EXIT_FAILURE);
}
string DEM_name;
string fill_ext = "_fill";
file_info_in >> DEM_name;
int junction_number;
float pruning_threshold;
int threshold;
float A_0;
int minimum_segment_length;
float sigma;
float start_movern;
float d_movern;
float Minimum_Slope;
int n_movern;
int target_nodes;
int n_iterations;
float fraction_dchi_for_variation;
float vertical_interval;
float horizontal_interval;
float area_thin_frac;
int target_skip;
file_info_in >> Minimum_Slope >> threshold >> junction_number
>> pruning_threshold >> A_0 >> minimum_segment_length >> sigma >> start_movern
>> d_movern >> n_movern >> target_nodes >> n_iterations >> fraction_dchi_for_variation
>> vertical_interval >> horizontal_interval >> area_thin_frac >> target_skip;
cout << "Paramters of this run: " << endl
<< "junction number: " << junction_number << endl
<< "pruning_threshold: " << pruning_threshold << endl
<< "threshold: " << threshold << endl
<< "A_0: " << A_0 << endl
<< "minimum_segment_length: " << minimum_segment_length << endl
<< "sigma: " << sigma << endl
<< "start_movern " << start_movern << endl
<< "d_movern: " << d_movern << endl
<< "n_movern: " << n_movern << endl
<< "target_nodes: " << target_nodes << endl
<< "n_iterarions: " << n_iterations << endl
<< "fraction_dchi_for_variation: " << fraction_dchi_for_variation << endl
<< "vertical interval: " << vertical_interval << endl
<< "horizontal interval: " << horizontal_interval << endl
<< "area thinning fraction for SA analysis: " << area_thin_frac << endl
<< "target_skip is: " << target_skip << endl;
cout << "=================================================================" << endl
<< "You are also loading a precipitation raster to get the discharge" << endl
<< "The precipitation raster should: " << endl
<< "1) Have units of m/yr" << endl
<< "Have the same prefix as the DEM, but will have the extension _PRECIP"<< endl
<< "For example, if the DEM is my_DEM.bil, the precip file will be" << endl
<< "my_DEM_precip.bil" << endl
<< "=================================================================" << endl;
string jn_name = itoa(junction_number);
string uscore = "_";
jn_name = uscore+jn_name;
file_info_in.close();
string DEM_f_name = path_name+DEM_name+fill_ext;
string DEM_bil_extension = "bil";
string precip_ext = "_PRECIP";
string Precip_f_name = path_name+DEM_name+precip_ext;
// set no flux boundary conditions
vector<string> boundary_conditions(4);
boundary_conditions[0] = "No";
boundary_conditions[1] = "no flux";
boundary_conditions[2] = "no flux";
boundary_conditions[3] = "No flux";
// load the filled DEM
LSDRaster filled_topo_test((path_name+DEM_name+fill_ext), DEM_bil_extension);
// get a flow info object
LSDFlowInfo FlowInfo(boundary_conditions,filled_topo_test);
// calcualte the distance from outlet
LSDRaster DistanceFromOutlet = FlowInfo.distance_from_outlet();
LSDIndexRaster ContributingPixels = FlowInfo.write_NContributingNodes_to_LSDIndexRaster();
// calculate the discharge
// note: not discharge yet, need to multiply by cell area
LSDRaster VolumePrecipitation(Precip_f_name, DEM_bil_extension);
float dx = VolumePrecipitation.get_DataResolution();
// volume precipitation per time precipitation times the cell areas
VolumePrecipitation.raster_multiplier(dx*dx);
// discharge accumulates this precipitation
LSDRaster Discharge = FlowInfo.upslope_variable_accumulator(VolumePrecipitation);
string Q_ext = "_Q";
string Q_f_name = path_name+DEM_name+Q_ext;
Discharge.write_raster(Q_f_name,DEM_bil_extension);
// get the sources
vector<int> sources;
sources = FlowInfo.get_sources_index_threshold(ContributingPixels, threshold);
// now get the junction network
LSDJunctionNetwork ChanNetwork(sources, FlowInfo);
// now get a junction and look for the longest channel upstream
cout << "creating main stem" << endl;
LSDIndexChannel main_stem = ChanNetwork.generate_longest_index_channel_in_basin(junction_number, FlowInfo, DistanceFromOutlet);
cout << "got main stem channel, with n_nodes " << main_stem.get_n_nodes_in_channel() << endl;
string Basin_name = "_basin";
LSDIndexRaster BasinArray = ChanNetwork.extract_basin_from_junction(junction_number,junction_number,FlowInfo);
BasinArray.write_raster((path_name+DEM_name+Basin_name+jn_name),DEM_bil_extension);
// now get the best fit m over n for all the tributaries
int organization_switch = 1;
int pruning_switch = 1;
LSDIndexChannelTree ChannelTree(FlowInfo, ChanNetwork, junction_number, organization_switch,
DistanceFromOutlet, pruning_switch, pruning_threshold);
LSDRaster DrainageArea = FlowInfo.write_DrainageArea_to_LSDRaster();
// print a file that can be ingested by the chi fitting algorithm
string Chan_fname = "_ChanNet";
string Chan_ext = ".chan";
string Chan_for_chi_ingestion_fname = path_name+DEM_name+Chan_fname+jn_name+Chan_ext;
ChannelTree.print_LSDChannels_for_chi_network_ingestion(FlowInfo,
filled_topo_test, DistanceFromOutlet, Chan_for_chi_ingestion_fname,
Discharge);
ChannelTree.convert_chan_file_for_ArcMap_ingestion(Chan_for_chi_ingestion_fname,DrainageArea,Discharge);
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This function is a much more rudimentary version that mimics the
// channel steepness caluclations.
// chi needs tobe calculated outside of the function
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDChiTools::chi_map_automator_rudimentary(LSDFlowInfo& FlowInfo,
vector<int> source_nodes,
vector<int> outlet_nodes,
LSDRaster& Elevation, LSDRaster& FlowDistance,
LSDRaster& DrainageArea, LSDRaster& chi_coordinate,
int regression_nodes)
{
// the data is stored in maps, for easier testing if a node has been
// visited.
// You might consider having these as data elements in the object so you don't
// have to pass them
map<int,float> gradient_data_map;
map<int,float> intercept_data_map;
map<int,float> R2_data_map;
map<int,float> chi_coordinate_data_map;
map<int,float> elevation_data_map;
map<int,float> flow_distance_map;
map<int,float> area_map;
vector<int> node_order;
// check if the number of nodes are odd .If not add 1
if (regression_nodes % 2 == 0)
{
cout << "Hello user. You need an odd number of regression nodes." << endl;
regression_nodes = regression_nodes+1;
cout << " Changing your regression nodes to " << regression_nodes << endl;
}
// now get the midpoint
int mp_nodes = (regression_nodes-1)/2;
//cout << "The number of mp nodes is: " << mp_nodes << endl;
// these keep track of the beginning and ending nodes of a given channel
int channel_start_node;
int channel_end_node;
float channel_end_elevation;
// vectors for holding the chi elevation data
vector<float> chi_vec;
vector<float> elev_vec;
vector<float> empty_vec;
// these are extracted from the channel segments using linear regression
float intercept,gradient,R_squared;
//float this_chi;
//float this_elev;
int this_mp_node;
int this_end_node;
int this_start_node;
// these are for getting information out of the FlowInfo object
int row,col, this_node;
int r_node, r_row,r_col; // reciever row and column.
// The way this works is that it starts at the top of a channel. It then works
// its way down and find the node that is the midpoint and the node that is the
// end point. The midpoint node is where the data will be recorded.
// It then puts the data from the start node to the end node into a vector
// and performs a linear regression of this vector. The regression data from these
// vectors are recorded at the nodes.
// We then want to cover all the nodes with data so what happens if some nodes
// do not become midpoints?
// We could start at the top and get the first midpoint.
// From there we can work our way down checking if the top of the regression segment
// is more than one node down from the end point...
// get the number of channels
int n_channels = int(source_nodes.size());
// now loop through the channels
for(int chan = 0; chan<n_channels; chan++)
{
channel_start_node = source_nodes[chan];
channel_end_node = outlet_nodes[chan];
// Get the elevation of the end node as a secondary check of the ending of the channel
// segment
FlowInfo.retrieve_current_row_and_col(channel_end_node,row,col);
channel_end_elevation = Elevation.get_data_element(row,col);
// reset the flag for ending the channel
bool is_end_of_channel = false;
// set the segment start node to the channel start node
this_start_node = channel_start_node;
// now retrieve the midpoint node
this_node = channel_start_node;
for(int n = 0; n<mp_nodes; n++)
{
FlowInfo.retrieve_receiver_information(this_node,r_node,r_row,r_col);
this_node = r_node;
}
this_mp_node = this_node;
this_node = r_node;
// now go down one step
FlowInfo.retrieve_receiver_information(this_node,r_node,r_row,r_col);
this_node = r_node;
// now get the end node
for(int n = 0; n<mp_nodes; n++)
{
FlowInfo.retrieve_receiver_information(this_node,r_node,r_row,r_col);
this_node = r_node;
}
this_end_node = this_node;
//================================================
// This loop is for bug checking
//this_node = this_start_node;
//do
//{
// // get the elevation and chi vectors by following the flow
// cout << "This node is: " << this_node << endl;
// FlowInfo.retrieve_current_row_and_col(this_node,row,col);
// FlowInfo.retrieve_receiver_information(this_node,r_node,r_row,r_col);
// this_node = r_node;
//}
//while(this_node != this_end_node);
//
//cout << "And the midpoint node was: " << this_mp_node << endl;
//================================================
// we search down the channel, collecting linear regressions at the
// midpoint of the intervals
while (not is_end_of_channel)
{
// get a vector of chi and elevation from the start node to the end node
chi_vec = empty_vec;
elev_vec = empty_vec;
// copy the data elements into the vecotrs. This is a little stupid
// because one might just use a deque to pop the first element
// and push the last, but the linear regression takes vectors,
// not deques so you would have to copy the deque element-wise anyway
// If you wanted, you could speed this up by implementing a linear regression
// of deques, but that will need to wait for another day.
this_node = this_start_node;
do
{
// get the elevation and chi vectors by following the flow
FlowInfo.retrieve_current_row_and_col(this_node,row,col);
chi_vec.push_back(chi_coordinate.get_data_element(row,col));
elev_vec.push_back(Elevation.get_data_element(row,col));
FlowInfo.retrieve_receiver_information(this_node,r_node,r_row,r_col);
this_node = r_node;
} while(this_node != this_end_node);
// do a linear regression on the segment
least_squares_linear_regression(chi_vec,elev_vec, intercept, gradient, R_squared);
// now add the intercept and gradient data to the correct node
// only take data that has not been calculated before
// The channels are in order of descending length so data from
// longer channels take precidence.
if (gradient_data_map.find(this_mp_node) == gradient_data_map.end() )
{
FlowInfo.retrieve_current_row_and_col(this_mp_node,row,col);
gradient_data_map[this_mp_node] = gradient;
intercept_data_map[this_mp_node] = intercept;
R2_data_map[this_mp_node] = R_squared;
chi_coordinate_data_map[this_mp_node] = chi_coordinate.get_data_element(row,col);
elevation_data_map[this_mp_node] = Elevation.get_data_element(row,col);
flow_distance_map[this_mp_node] = FlowDistance.get_data_element(row,col);
area_map[this_mp_node] = DrainageArea.get_data_element(row,col);
node_order.push_back(this_mp_node);
}
else
{
is_end_of_channel = true;
}
// now move all the nodes down one
FlowInfo.retrieve_receiver_information(this_start_node,r_node,r_row,r_col);
this_start_node = r_node;
FlowInfo.retrieve_receiver_information(this_mp_node,r_node,r_row,r_col);
this_mp_node = r_node;
FlowInfo.retrieve_receiver_information(this_end_node,r_node,r_row,r_col);
this_end_node = r_node;
// check if we are at the end of the channel
if (this_end_node == channel_end_node)
{
is_end_of_channel = true;
}
// also check if the end node is lower elevation than the end node,
// just to try and stop the channel passing the end node
FlowInfo.retrieve_current_row_and_col(this_end_node,row,col);
if (channel_end_elevation > Elevation.get_data_element(row,col))
{
is_end_of_channel = true;
}
} // This finishes the regression segment loop
} // This finishes the channel and resets channel start and end nodes
// set the data objects
M_chi_data_map = gradient_data_map;
b_chi_data_map = intercept_data_map;
elev_data_map = elevation_data_map;
chi_data_map = chi_coordinate_data_map;
flow_distance_data_map = flow_distance_map;
drainage_area_data_map = area_map;
node_sequence = node_order;
}
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
// This function is for calculating segments from all sources in a DEM
// The sources and their outlets are supplied by the source and outlet nodes
// vectors. These are generated from the LSDJunctionNetwork function
// get_overlapping_channels
//=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
void LSDChiTools::chi_map_automator(LSDFlowInfo& FlowInfo,
vector<int> source_nodes,
vector<int> outlet_nodes,
LSDRaster& Elevation, LSDRaster& FlowDistance,
LSDRaster& DrainageArea, LSDRaster& chi_coordinate,
int target_nodes,
int n_iterations, int skip,
int minimum_segment_length, float sigma)
{
// IMPORTANT THESE PARAMETERS ARE NOT USED BECAUSE CHI IS CALUCALTED SEPARATELY
// However we need to give something to pass to the Monte carlo functions
// even through they are not used (they are inherited)
float A_0 = 1;
float m_over_n = 0.5;
// These elements access the chi data
vector< vector<float> > chi_m_means;
vector< vector<float> > chi_b_means;
vector< vector<float> > chi_coordinates;
vector< vector<int> > chi_node_indices;
// these are for the individual channels
vector<float> these_chi_m_means;
vector<float> these_chi_b_means;
vector<float> these_chi_coordinates;
vector<int> these_chi_node_indices;
// these are maps that will store the data
map<int,float> m_means_map;
map<int,float> b_means_map;
map<int,float> chi_coord_map;
map<int,float> elev_map;
map<int,float> area_map;
map<int,float> flow_distance_map;
vector<int> node_sequence_vec;
// these are for working with the FlowInfo object
int this_node,row,col;
// get the number of channels
int n_channels = int(source_nodes.size());
for(int chan = 0; chan<n_channels; chan++)
{
cout << "Sampling channel " << chan+1 << " of " << n_channels << endl;
// get this particualr channel (it is a chi network with only one channel)
LSDChiNetwork ThisChiChannel(FlowInfo, source_nodes[chan], outlet_nodes[chan],
Elevation, FlowDistance, DrainageArea,chi_coordinate);
// split the channel
//cout << "Splitting channels" << endl;
ThisChiChannel.split_all_channels(A_0, m_over_n, n_iterations, skip, target_nodes, minimum_segment_length, sigma);
// monte carlo sample all channels
//cout << "Entering the monte carlo sampling" << endl;
ThisChiChannel.monte_carlo_sample_river_network_for_best_fit_after_breaks(A_0, m_over_n, n_iterations, skip, minimum_segment_length, sigma);
// okay the ChiNetwork has all the data about the m vales at this stage.
// Get these vales and print them to a raster
chi_m_means = ThisChiChannel.get_m_means();
chi_b_means = ThisChiChannel.get_b_means();
chi_coordinates = ThisChiChannel.get_chis();
chi_node_indices = ThisChiChannel.get_node_indices();
// now get the number of channels. This should be 1!
int n_channels = int(chi_m_means.size());
if (n_channels != 1)
{
cout << "Whoa there, I am trying to make a chi map but something seems to have gone wrong with the channel extraction." << endl;
cout << "I should only have one channel per look but I have " << n_channels << " channels." << endl;
}
// now get the m_means out
these_chi_m_means = chi_m_means[0];
these_chi_b_means = chi_b_means[0];
these_chi_coordinates = chi_coordinates[0];
these_chi_node_indices = chi_node_indices[0];
//cout << "I have " << these_chi_m_means.size() << " nodes." << endl;
int n_nodes_in_channel = int(these_chi_m_means.size());
for (int node = 0; node< n_nodes_in_channel; node++)
{
this_node = these_chi_node_indices[node];
//cout << "This node is " << this_node << endl;
// only take the nodes that have not been found
if (m_means_map.find(this_node) == m_means_map.end() )
{
FlowInfo.retrieve_current_row_and_col(this_node,row,col);
//cout << "This is a new node; " << this_node << endl;
m_means_map[this_node] = these_chi_m_means[node];
b_means_map[this_node] = these_chi_b_means[node];
chi_coord_map[this_node] = these_chi_coordinates[node];
elev_map[this_node] = Elevation.get_data_element(row,col);
area_map[this_node] = DrainageArea.get_data_element(row,col);
flow_distance_map[this_node] = FlowDistance.get_data_element(row,col);
node_sequence_vec.push_back(this_node);
}
else
{
//cout << "I already have node: " << this_node << endl;
}
}
}
// set the opject data members
M_chi_data_map =m_means_map;
b_chi_data_map = b_means_map;
elev_data_map = elev_map;
chi_data_map = chi_coord_map;
flow_distance_data_map = flow_distance_map;
drainage_area_data_map = area_map;
node_sequence = node_sequence_vec;
}
void LSDSoilHydroRaster::create(LSDRaster& DEM, LSDRaster& OtherRaster, int min_max)
{
NRows = OtherRaster.get_NRows();
NCols = OtherRaster.get_NCols();
XMinimum = OtherRaster.get_XMinimum();
YMinimum = OtherRaster.get_YMinimum();
DataResolution = OtherRaster.get_DataResolution();
NoDataValue = OtherRaster.get_NoDataValue();
GeoReferencingStrings = OtherRaster.get_GeoReferencingStrings();
// set the raster data to be a certain value
Array2D<float> data(NRows,NCols,NoDataValue);
float min_max_val = NoDataValue;
if (min_max == 0){
// get the minimum value of OtherRaster
Array2D<float> tmp = OtherRaster.get_RasterData();
min_max_val = Get_Minimum(tmp, NoDataValue);
}
else if (min_max == 1){
// get the maximum value of OtherRaster
Array2D<float> tmp = OtherRaster.get_RasterData();
min_max_val = Get_Maximum(tmp, NoDataValue);
}
// for each cell, if there is no paramter data but there is topo, fill in the data with the minimum/maximum value
// otherwise, just keep the minimum value.
for (int i = 0; i < NRows; ++i){
for (int j = 0; j < NCols; ++j){
if (DEM.get_data_element(i, j) != NoDataValue && OtherRaster.get_data_element(i,j) == NoDataValue){
data[i][j] = min_max_val;
}
else if (DEM.get_data_element(i, j) != NoDataValue && OtherRaster.get_data_element(i, j) != NoDataValue){
data[i][j] = OtherRaster.get_data_element(i,j);
}
}
}
RasterData = data.copy();
}
int main (int nNumberofArgs,char *argv[])
{
// the driver version
string driver_version = "Driver_version: 0.01";
// some paramters
//Test for correct input arguments
if (nNumberofArgs!=5)
{
cout << endl;
cout << "=====================================================================" << endl;
cout << "|| Welcome to the Topographic Shielding tool! ||" << endl;
cout << "|| This program is used to calculate topographic shielding_driver ||" << endl;
cout << "|| rasters following the method of Codilean (2006). ||" << endl;
cout << "=====================================================================" << endl;
cout << "This program requires four inputs: " << endl;
cout << "* First the path to the DEM files." << endl;
cout << " The path must have a slash at the end." << endl;
cout << " (Either \\ or / depending on your operating system.)" << endl;
cout << "* Second the prefix of the DEM (that is, without the .bil)." << endl;
cout << " For example if you DEM is Ladakh.bil, you should enter Ladakh" << endl;
cout << " (Note that the DEM should be in *.bil format)" << endl;
cout << "* Third the increment in azimuth (in degrees) over which you" << endl;
cout << " want shielding calculated. Recommended values is 5" << endl;
cout << "* Fourth the increment in inclination (in degrees) over which you" << endl;
cout << " want shielding calculated. Recommended values is 5" << endl;
cout << "=====================================================================" << endl;
cout << "For more documentation, see readme and online documentation" << endl;
cout << "=====================================================================" << endl;
cout << endl;
exit(EXIT_SUCCESS);
}
cout << endl;
cout << "===============================================================" << endl;
cout << "Welcome to the Topographic Shielding tool" << endl;
cout << "This software was developed at the University of Edinburgh," << endl;
cout << "by the Land Surface Dynamics group. For questions email" << endl;
cout << "simon.m.mudd _at_ ed.ac.uk" << endl;
cout << "This software is released under a GNU public license." << endl;
cout << "You are using " << driver_version << endl;
cout << "================================================================" << endl;
cout << "++IMPORTANT++ The DEM must be an ENVI bil format file" << endl;
cout << "ENVI bil files are required because, unlike asc or flt files, " << endl;
cout << "they use georeferencing information." << endl;
cout << "For more information about changing DEM formatting, see: " << endl;
cout << "http://lsdtopotools.github.io/LSDTT_book/#_gdal_2" << endl;
cout << "================================================================" << endl;
//Assign values from input arguments
string path_name = argv[1];
string file_name = argv[2];
string azimuth_str = argv[3];
string inclination_str = argv[4];
//Set the DEM filename
file_name = path_name+file_name;
//Convert the angle increments to integers
int azimuth_step = atoi(azimuth_str.c_str());
int inclination_step = atoi(inclination_str.c_str());
// check the parameter values
check_azimuth_and_inclination(azimuth_step,inclination_step);
//load dem
LSDRaster DEM(file_name, "bil");
//launch toposhielding
LSDRaster TopoShielding = DEM.TopographicShielding(azimuth_step,inclination_step);
TopoShielding.write_raster(file_name+"_TopoShield","bil");
cout << "Done!" << endl << endl;
}