int Coll_allgather_mvapich2_smp::allgather(void *sendbuf,int sendcnt, MPI_Datatype sendtype,
void *recvbuf, int recvcnt,MPI_Datatype recvtype,
MPI_Comm comm)
{
int rank, size;
int local_rank, local_size;
int leader_comm_size = 0;
int mpi_errno = MPI_SUCCESS;
MPI_Aint recvtype_extent = 0; /* Datatype extent */
MPI_Comm shmem_comm, leader_comm;
if(comm->get_leaders_comm()==MPI_COMM_NULL){
comm->init_smp();
}
if (not comm->is_uniform() || not comm->is_blocked())
THROWF(arg_error,0, "allgather MVAPICH2 smp algorithm can't be used with irregular deployment. Please insure that processes deployed on the same node are contiguous and that each node has the same number of processes");
if (recvcnt == 0) {
return MPI_SUCCESS;
}
rank = comm->rank();
size = comm->size();
/* extract the rank,size information for the intra-node communicator */
recvtype_extent=recvtype->get_extent();
shmem_comm = comm->get_intra_comm();
local_rank = shmem_comm->rank();
local_size = shmem_comm->size();
if (local_rank == 0) {
/* Node leader. Extract the rank, size information for the leader communicator */
leader_comm = comm->get_leaders_comm();
if(leader_comm==MPI_COMM_NULL){
leader_comm = MPI_COMM_WORLD;
}
leader_comm_size = leader_comm->size();
}
/*If there is just one node, after gather itself,
* root has all the data and it can do bcast*/
if(local_rank == 0) {
mpi_errno = Colls::gather(sendbuf, sendcnt,sendtype,
(void*)((char*)recvbuf + (rank * recvcnt * recvtype_extent)),
recvcnt, recvtype,
0, shmem_comm);
} else {
/*Since in allgather all the processes could have
* its own data in place*/
if(sendbuf == MPI_IN_PLACE) {
mpi_errno = Colls::gather((void*)((char*)recvbuf + (rank * recvcnt * recvtype_extent)),
recvcnt , recvtype,
recvbuf, recvcnt, recvtype,
0, shmem_comm);
} else {
mpi_errno = Colls::gather(sendbuf, sendcnt,sendtype,
recvbuf, recvcnt, recvtype,
0, shmem_comm);
}
}
/* Exchange the data between the node leaders*/
if (local_rank == 0 && (leader_comm_size > 1)) {
/*When data in each socket is different*/
if (comm->is_uniform() != 1) {
int *displs = NULL;
int *recvcnts = NULL;
int *node_sizes = NULL;
int i = 0;
node_sizes = comm->get_non_uniform_map();
displs = static_cast<int *>(xbt_malloc(sizeof (int) * leader_comm_size));
recvcnts = static_cast<int *>(xbt_malloc(sizeof (int) * leader_comm_size));
if (not displs || not recvcnts) {
return MPI_ERR_OTHER;
}
recvcnts[0] = node_sizes[0] * recvcnt;
displs[0] = 0;
for (i = 1; i < leader_comm_size; i++) {
displs[i] = displs[i - 1] + node_sizes[i - 1] * recvcnt;
recvcnts[i] = node_sizes[i] * recvcnt;
}
void* sendbuf=((char*)recvbuf)+recvtype->get_extent()*displs[leader_comm->rank()];
mpi_errno = Colls::allgatherv(sendbuf,
(recvcnt*local_size),
recvtype,
recvbuf, recvcnts,
displs, recvtype,
leader_comm);
xbt_free(displs);
xbt_free(recvcnts);
} else {
void* sendtmpbuf=((char*)recvbuf)+recvtype->get_extent()*(recvcnt*local_size)*leader_comm->rank();
mpi_errno = Coll_allgather_mpich::allgather(sendtmpbuf,
(recvcnt*local_size),
recvtype,
recvbuf, (recvcnt*local_size), recvtype,
leader_comm);
}
}
/*Bcast the entire data from node leaders to all other cores*/
mpi_errno = Colls::bcast (recvbuf, recvcnt * size, recvtype, 0, shmem_comm);
return mpi_errno;
}
int Coll_scatter_mvapich2::scatter(const void *sendbuf,
int sendcnt,
MPI_Datatype sendtype,
void *recvbuf,
int recvcnt,
MPI_Datatype recvtype,
int root, MPI_Comm comm)
{
int range = 0, range_threshold = 0, range_threshold_intra = 0;
int mpi_errno = MPI_SUCCESS;
// int mpi_errno_ret = MPI_SUCCESS;
int rank, nbytes, comm_size;
int partial_sub_ok = 0;
int conf_index = 0;
MPI_Comm shmem_comm;
// MPID_Comm *shmem_commptr=NULL;
if(mv2_scatter_thresholds_table==NULL)
init_mv2_scatter_tables_stampede();
if(comm->get_leaders_comm()==MPI_COMM_NULL){
comm->init_smp();
}
comm_size = comm->size();
rank = comm->rank();
if (rank == root) {
int sendtype_size = sendtype->size();
nbytes = sendcnt * sendtype_size;
} else {
int recvtype_size = recvtype->size();
nbytes = recvcnt * recvtype_size;
}
// check if safe to use partial subscription mode
if (comm->is_uniform()) {
shmem_comm = comm->get_intra_comm();
if (mv2_scatter_table_ppn_conf[0] == -1) {
// Indicating user defined tuning
conf_index = 0;
}else{
int local_size = shmem_comm->size();
int i = 0;
do {
if (local_size == mv2_scatter_table_ppn_conf[i]) {
conf_index = i;
partial_sub_ok = 1;
break;
}
i++;
} while(i < mv2_scatter_num_ppn_conf);
}
}
if (partial_sub_ok != 1) {
conf_index = 0;
}
/* Search for the corresponding system size inside the tuning table */
while ((range < (mv2_size_scatter_tuning_table[conf_index] - 1)) &&
(comm_size > mv2_scatter_thresholds_table[conf_index][range].numproc)) {
range++;
}
/* Search for corresponding inter-leader function */
while ((range_threshold < (mv2_scatter_thresholds_table[conf_index][range].size_inter_table - 1))
&& (nbytes >
mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold].max)
&& (mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold].max != -1)) {
range_threshold++;
}
/* Search for corresponding intra-node function */
while ((range_threshold_intra <
(mv2_scatter_thresholds_table[conf_index][range].size_intra_table - 1))
&& (nbytes >
mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra].max)
&& (mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra].max !=
-1)) {
range_threshold_intra++;
}
MV2_Scatter_function = mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold]
.MV2_pt_Scatter_function;
if(MV2_Scatter_function == &MPIR_Scatter_mcst_wrap_MV2) {
#if defined(_MCST_SUPPORT_)
if(comm->ch.is_mcast_ok == 1
&& mv2_use_mcast_scatter == 1
&& comm->ch.shmem_coll_ok == 1) {
MV2_Scatter_function = &MPIR_Scatter_mcst_MV2;
} else
#endif /*#if defined(_MCST_SUPPORT_) */
{
if(mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold + 1].
MV2_pt_Scatter_function != NULL) {
MV2_Scatter_function = mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold + 1]
.MV2_pt_Scatter_function;
} else {
/* Fallback! */
MV2_Scatter_function = &MPIR_Scatter_MV2_Binomial;
}
}
}
if( (MV2_Scatter_function == &MPIR_Scatter_MV2_two_level_Direct) ||
(MV2_Scatter_function == &MPIR_Scatter_MV2_two_level_Binomial)) {
if( comm->is_blocked()) {
MV2_Scatter_intra_function = mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra]
.MV2_pt_Scatter_function;
mpi_errno =
MV2_Scatter_function(sendbuf, sendcnt, sendtype,
recvbuf, recvcnt, recvtype, root,
comm);
} else {
mpi_errno = MPIR_Scatter_MV2_Binomial(sendbuf, sendcnt, sendtype,
recvbuf, recvcnt, recvtype, root,
comm);
}
} else {
mpi_errno = MV2_Scatter_function(sendbuf, sendcnt, sendtype,
recvbuf, recvcnt, recvtype, root,
comm);
}
return (mpi_errno);
}
