// public methods
void TransitionPQPReader::convertTargetedExperimentToPQP(const char* filename, OpenMS::TargetedExperiment& targeted_exp)
{
if (targeted_exp.containsInvalidReferences())
{
throw Exception::IllegalArgument(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION,
"Your input file contains invalid references, cannot process file.");
}
writePQPOutput_(filename, targeted_exp);
}
