// extract alignment data for a given mate
// note that the mates can be different for the cigar, since mate 1 is always the anchor mate for cigars
AlignmentData CPUOutputBatch::get_mate(uint32 read_id, AlignmentMate mate, AlignmentMate cigar_mate)
{
return AlignmentData(&best_alignments[read_id].best[mate],
&best_alignments[read_id].second_best[mate],
read_id,
read_data[mate],
&cigar[cigar_mate],
&mds[cigar_mate]);
}
void VertexButton::updatePosition()
{
_border[0].position = sf::Vector2f(_bound.left, _bound.top);
_border[1].position = sf::Vector2f(_bound.left + _bound.width, _bound.top);
_border[2].position = sf::Vector2f(_bound.left + _bound.width, _bound.top + _bound.height);
_border[3].position = sf::Vector2f(_bound.left, _bound.top + _bound.height);
_border[4].position = sf::Vector2f(_bound.left, _bound.top);
_background[0].position = sf::Vector2f(_bound.left, _bound.top);
_background[1].position = sf::Vector2f(_bound.left + _bound.width, _bound.top);
_background[2].position = sf::Vector2f(_bound.left + _bound.width, _bound.top + _bound.height);
_background[3].position = sf::Vector2f(_bound.left, _bound.top + _bound.height);
zf::alignText(_text, _bound, AlignmentData());
}
void VertexButton::setString(std::string str)
{
_text.setString(str);
zf::alignText(_text, _bound, AlignmentData());
}