char*
StringMoveHistory(MemorySlice *history, bool abbrev)
{
Move move;
Memory *curr;
Side side = White;
StringBuilder builder = NewStringBuilder();
int fullMoveCount = 1;
for(curr = history->Vals; curr != history->Curr; curr++) {
move = curr->Move;
if(abbrev) {
AppendString(&builder, "%s ", StringMove(move));
} else {
switch(side) {
case White:
AppendString(&builder, "%d. %s",
fullMoveCount, StringMove(move));
break;
case Black:
AppendString(&builder, " %s\n",
StringMove(move));
fullMoveCount++;
break;
}
}
side = OPPOSITE(side);
}
return builder.Length == 0 ? NULL : BuildString(&builder, true);
}
// Test that our search finds example mates in one.
char*
TestMatesInTwo()
{
char *fen;
Game game;
int i, dummyVal;
Move actual, expected;
uint64_t dummy = 0;
StringBuilder builder = NewStringBuilder();
for(i = 0; i < COUNT; i++) {
fen = fens[i];
expected = ParseMove(mates[i]);
game = ParseFen(fen);
actual = Search(&game, &dummy, &dummyVal, 3);
if(actual != expected) {
AppendString(&builder, "Search failed mate-in-two for:-\n\n"
"%s\n"
"Expected move %s, engine selected %s.\n\n",
StringChessSet(&game.ChessSet), StringMove(expected), StringMove(actual));
}
}
return builder.Length == 0 ? NULL : BuildString(&builder, true);
}
/*****************************************************************************
*
* PersonIdPrint(pip, buf)
*
*****************************************************************************/
NLM_EXTERN CharPtr PersonIdPrint(PersonIdPtr pip, CharPtr buf)
{
CharPtr tmp;
NameStdPtr nsp;
if (buf == NULL) return NULL;
tmp = buf;
*tmp = '?';
*(tmp + 1) = '\0';
if (pip == NULL) return buf;
if (pip->choice == 2) /* std */
{
nsp = (NameStdPtr) (pip->data);
if (nsp != NULL)
{
if (nsp->names [3] != NULL) /* full name */
tmp = StringMove(tmp, nsp->names [3]);
else if (nsp->names[0] != NULL) /* make from parts */
{
if (nsp->names [1] != NULL && nsp->names [2] != NULL)
{
tmp = StringMove(tmp, nsp->names [1]); /* first */
*tmp = ' '; tmp++; *tmp='\0';
tmp = StringMove(tmp, nsp->names [2]); /* middle */
*tmp = ' '; tmp++; *tmp='\0';
}
else if ((nsp->names [4] != NULL) &&
(nsp->names [0] != NULL) &&
(StringLen(nsp->names[4]) < 10))
{
tmp = StringMove(tmp, nsp->names [4]); /* initials */
*tmp = ' '; tmp++; *tmp='\0';
}
else if (nsp->names [1] != NULL)
{
tmp = StringMove(tmp, nsp->names [1]);
*tmp = ' '; tmp++; *tmp='\0';
}
tmp = StringMove(tmp, nsp->names [0]); /* last */
if (nsp->names[5] != NULL) /* suffix */
{
*tmp = ' '; tmp++; *tmp='\0';
tmp = StringMove(tmp, nsp->names[5]);
}
}
}
}
else if (pip->choice == 3 || pip->choice == 4) /* ml or str */
StringMove(tmp, (CharPtr)(pip->data));
return buf;
}
/*****************************************************************************
*
* CharPtr AsnTypeDumpStack(str, aip)
* dump a typestack into str
* returns a pointer to the '\0' at the end of the str
*
*****************************************************************************/
NLM_EXTERN CharPtr LIBCALL AsnTypeDumpStack (CharPtr str, AsnIoPtr aip)
{
Int2 level, isa, lastnochoice;
lastnochoice = -1;
*str = '\0';
for(level = 0; level <= aip->type_indent; level++)
{
if (level == aip->type_indent)
{
if ((aip->type & ASNIO_OUT) ||
((aip->type & ASNIO_IN) && (aip->read_id == FALSE)))
str = StringMove(str, "<");
}
if (aip->typestack[level].type == NULL)
str = StringMove(str, " ");
else
{
isa = AsnFindBaseIsa(aip->typestack[level].type);
if (aip->typestack[level].type->name != NULL)
str = StringMove(str, aip->typestack[level].type->name);
else if ((lastnochoice == SEQOF_TYPE) ||
(lastnochoice == SETOF_TYPE))
str = StringMove(str, "E");
else
str = StringMove(str, "?");
if (isa != CHOICE_TYPE)
lastnochoice = isa;
}
if (level != aip->type_indent)
str = StringMove(str, ".");
else
{
if ((aip->type & ASNIO_OUT) ||
((aip->type & ASNIO_IN) && (aip->read_id == FALSE)))
str = StringMove(str, ">");
}
}
return str;
}
static void PrintSequence (BioseqPtr bsp, SeqFeatPtr sfp,
FILE *fp, Boolean is_na)
{
Char buffer [255];
Uint1 code;
Int2 count;
Uint1 repr;
Uint1 residue;
SeqPortPtr spp;
CharPtr title;
CharPtr tmp;
if (bsp != NULL && fp != NULL) {
if ((Boolean) ISA_na (bsp->mol) == is_na) {
repr = Bioseq_repr (bsp);
if (repr == Seq_repr_raw || repr == Seq_repr_const) {
title = BioseqGetTitle (bsp);
tmp = StringMove (buffer, ">");
tmp = SeqIdPrint (bsp->id, tmp, PRINTID_FASTA_LONG);
tmp = StringMove (tmp, " ");
StringNCpy (tmp, title, 200);
fprintf (fp, "%s\n", buffer);
if (pmon != NULL)
MonitorStrValue(pmon, buffer);
if (is_na) {
code = Seq_code_iupacna;
} else {
code = Seq_code_iupacaa;
}
if (sfp != NULL) {
spp = SeqPortNewByLoc (sfp->location, code);
} else {
spp = SeqPortNew (bsp, 0, -1, 0, code);
}
if (spp != NULL) {
count = 0;
while ((residue = SeqPortGetResidue (spp)) != SEQPORT_EOF) {
if (! IS_residue (residue)) {
buffer [count] = '\0';
fprintf (fp, "%s\n", buffer);
count = 0;
switch (residue) {
case SEQPORT_VIRT :
fprintf (fp, "[Gap]\n");
break;
case SEQPORT_EOS :
fprintf (fp, "[EOS]\n");
break;
default :
fprintf (fp, "[Invalid Residue]\n");
break;
}
} else {
buffer [count] = residue;
count++;
if (count >= CHARSPERLINE) {
buffer [count] = '\0';
fprintf (fp, "%s\n", buffer);
count = 0;
}
}
}
if (count != 0) {
buffer [count] = '\0';
fprintf (fp, "%s\n", buffer);
}
SeqPortFree (spp);
}
}
}
}
}
/*****************************************************************************
*
* FileBuildPath()
*
*****************************************************************************/
NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_FileBuildPath (Nlm_CharPtr root, Nlm_CharPtr sub_path, Nlm_CharPtr filename)
{
Nlm_CharPtr tmp;
Nlm_Boolean dir_start = FALSE;
#ifdef OS_VMS
Nlm_Boolean had_root = FALSE;
#endif
if (root == NULL) /* no place to put it */
return NULL;
tmp = root;
if (*tmp != '\0') /* if not empty */
{
#ifndef OS_VMS
dir_start = TRUE;
#else
had_root = TRUE;
#endif
while (*tmp != '\0')
{
#ifdef OS_VMS
if (*tmp == '[')
dir_start = TRUE;
#endif
tmp++;
}
if ((*(tmp - 1) != DIRDELIMCHR) && (dir_start))
{
*tmp = DIRDELIMCHR;
tmp++; *tmp = '\0';
}
}
if (sub_path != NULL)
{
#ifdef OS_VMS
if (dir_start)
{
*(tmp-1) = '.';
if (*sub_path == '[')
sub_path++;
}
else if ((had_root) && (*sub_path != '['))
{
*tmp = '[';
tmp++; *tmp = '\0';
}
#else
if ((dir_start) && (*sub_path == DIRDELIMCHR))
sub_path++;
#endif
tmp = StringMove(tmp, sub_path);
if (*(tmp-1) != DIRDELIMCHR)
{
*tmp = DIRDELIMCHR;
tmp++; *tmp = '\0';
}
}
if (filename != NULL)
StringMove(tmp, filename);
return root;
}
static void AddXMLname(AsnTypePtr atp, AsnTypePtr PNTR typestack, Int2 stackptr)
{
Char buf[80];
AsnTypePtr atp2;
Boolean found=FALSE, getparent=TRUE, doitem = FALSE, done = FALSE;
CharPtr tmp;
Int2 i, isa;
if (atp->XMLname == NULL) /* only do it once */
{
tmp = buf; *tmp = '\0';
if (atp->name == NULL)
{
doitem = TRUE;
}
else if (IS_UPPER(*(atp->name)))
{
getparent = FALSE;
tmp = StringMove(tmp, atp->name);
}
if ((getparent) && (stackptr))
{
atp2 = typestack[stackptr - 1];
isa = AsnFindBaseIsa(atp2);
if ((doitem) && ((isa == SEQOF_TYPE) || (isa == SETOF_TYPE)))
{
atp2 = AsnFindBaseTypeDTD(atp);
if (atp2 != NULL)
{
if (atp2->name == NULL)
{
atp2 = typestack[stackptr - 1];
if (atp->type != NULL)
{
if (ISA_BASETYPE(atp->type->isa))
{
if (atp2->XMLname != NULL)
{
tmp = StringMove(tmp, atp2->XMLname);
getparent = FALSE;
found = TRUE;
}
}
}
}
else
{
if (atp2->XMLname != NULL)
tmp = StringMove(tmp, atp2->XMLname);
else if (atp2->name != NULL)
tmp = StringMove(tmp, atp2->name);
if (*buf != '\0')
{
doitem = FALSE;
getparent = FALSE;
done = TRUE;
found = TRUE;
}
}
}
}
atp2 = typestack[stackptr - 1];
if ((getparent) && (atp2->XMLname != NULL)) /* already nested */
{
tmp = StringMove(tmp, atp2->XMLname);
tmp = StringMove(tmp, "_");
getparent = FALSE;
found = TRUE;
}
if ((stackptr) && (getparent))
{
found = FALSE;
for (i = (stackptr - 1); (i >= 0) && (! found); i--)
{
atp2 = AsnFindBaseTypeDTD(typestack[i]);
if ((atp2 != NULL) && (atp2->name != NULL) && (IS_UPPER(*(atp2->name))))
{
while (i < stackptr)
{
atp2 = AsnFindBaseTypeDTD(typestack[i]);
if (atp2->name == NULL)
tmp = StringMove(tmp, "E");
else
tmp = StringMove(tmp, atp2->name);
tmp = StringMove(tmp, "_");
i++;
}
found = TRUE;
}
}
}
if ((! done) && found)
{
if (doitem)
tmp = StringMove(tmp, "_E");
else
tmp = StringMove(tmp, atp->name);
}
}
if (*buf != '\0')
{
atp->XMLname = StringSave(buf);
}
}
atp2 = AsnFindBaseTypeDTD(atp);
if ((! atp->imported) && (atp2 != NULL) && (atp2->type != NULL))
{
isa = atp2->type->isa;
if ((isa == SEQ_TYPE) || (isa == SET_TYPE))
{
typestack[stackptr] = atp;
for (atp2 = atp->branch; atp2 != NULL; atp2 = atp2->next)
AddXMLname(atp2, typestack, (Int2)(stackptr + 1));
}
else if ((isa == SEQOF_TYPE) || (isa == SETOF_TYPE))
{
typestack[stackptr] = atp;
for (atp2 = atp->branch; atp2 != NULL; atp2 = atp2->next)
AddXMLname(atp2, typestack, (Int2)(stackptr + 1));
}
else if (isa == CHOICE_TYPE)
{
typestack[stackptr] = atp;
for (atp2 = atp->branch; atp2 != NULL; atp2 = atp2->next)
AddXMLname(atp2, typestack, (Int2)(stackptr + 1));
}
}
return;
}
NLM_EXTERN Nlm_Boolean LIBCALL StringSubString(char FAR *theString, char FAR *Find, char FAR *Replace, Nlm_Int4 MaxLength)
/* replaces all non-overlapping instances of the string Find in the
string theString with the string Replace. The strings do not have to be the
same size. The new string is truncated at MaxLength characters
Including the final NULL). If MaxLength is zero, the string's current
length is presumed to be the maximum.
It returns TRUE if any strings were replaced, else FALSE.
*/
{
Nlm_CharPtr FindPtr,ComparePtr,StringPtr,NewString, NewStringPtr;
Nlm_Int4 SpaceNeeded,Len;
Nlm_Boolean Replaced = FALSE;
if (*Find == NULLB)
return(FALSE);
Len = Nlm_StringLen(theString);
SpaceNeeded = MAX( (Nlm_Int4)((Len * Nlm_StringLen(Replace)
* sizeof(Nlm_Char) )
/ Nlm_StringLen(Find) + 1),Len) + 1;
NewStringPtr = NewString = (Nlm_CharPtr)
Nlm_MemGet((size_t)SpaceNeeded, MGET_ERRPOST);
StringPtr = theString;
while (*StringPtr != NULLB)
{
FindPtr = Find;
ComparePtr = StringPtr;
while ( (*FindPtr != NULLB) && (*FindPtr == *ComparePtr) )
{
FindPtr++;
ComparePtr++;
}
/* if we found the entire string, replace it. */
if (*FindPtr == NULLB)
{
NewStringPtr = StringMove(NewStringPtr,Replace);
StringPtr = ComparePtr;
Replaced = TRUE;
}
else
/* otherwise, move on to the next character. */
*NewStringPtr++ = *StringPtr++;
}
*NewStringPtr = NULLB;
if (MaxLength <= 0)
MaxLength = strlen(theString) + 1;
/* Truncate the string, if necessary.*/
if ((Nlm_Int4)strlen(NewString) >= MaxLength - 1)
{
NewString[MaxLength-1] = NULLB;
}
Nlm_StringCpy(theString,NewString);
Nlm_MemFree(NewString);
return(Replaced);
}
void BioseqRawToRaw(BioseqPtr bsp, Boolean idonly,
short whichSeq, short *seqnum,
char **seq, char **seqid, long *seqlen)
{
SeqPortPtr spp;
SeqIdPtr bestid;
Uint1 repr, code, residue;
CharPtr tmp, title;
long outlen, outmax;
char localid[256], *sp;
/* !!! this may be called several times for a single sequence
because SeqEntryExplore looks for parts and joins them...
assume seq, seqid, seqlen may contain data (or NULL)
*/
if (bsp == NULL) return;
repr = Bioseq_repr(bsp);
if (!(repr == Seq_repr_raw || repr == Seq_repr_const)) return;
(*seqnum)++;
if (!(whichSeq == *seqnum || whichSeq == 0)) return;
bestid = SeqIdFindBest(bsp->id, (Uint1) 0);
title = BioseqGetTitle(bsp);
if (idonly) {
sprintf(localid, " %d) ", *seqnum);
tmp= localid + strlen(localid)-1;
}
else {
strcpy(localid," ");
tmp= localid;
}
tmp = SeqIdPrint(bestid, tmp, PRINTID_FASTA_SHORT);
tmp = StringMove(tmp, " ");
StringNCpy(tmp, title, 200);
/* fprintf(stderr,"BioseqRawToRaw: localid='%s'\n",localid); */
/* < seqid is fixed storage */
/* strcpy( *seqid, localid); */
/* < seqid is variable sized */
outmax= strlen(localid) + 3;
if (*seqid==NULL) {
*seqid= (char*) malloc(outmax);
if (*seqid==NULL) return;
strcpy(*seqid, localid);
}
else {
outmax += strlen(*seqid) + 2;
*seqid= (char*) realloc( *seqid, outmax);
if (*seqid==NULL) return;
if (!idonly) strcat(*seqid, "; ");
strcat(*seqid, localid);
}
if (idonly) {
strcat(*seqid,"\n");
return;
}
if (ISA_na(bsp->mol)) code = Seq_code_iupacna;
else code = Seq_code_iupacaa;
spp = SeqPortNew(bsp, 0, -1, 0, code);
SeqPortSeek(spp, 0, SEEK_SET);
sp= *seq;
if (sp==NULL) { /* this is always true now !? */
outlen= 0;
outmax= 500;
sp= (char*) malloc(outmax);
}
else {
outlen= strlen(sp);
outmax= outlen + 500;
sp= (char*) realloc( sp, outmax);
}
if (sp==NULL) return;
while ((residue = SeqPortGetResidue(spp)) != SEQPORT_EOF) {
if (outlen>=outmax) {
outmax= outlen + 500;
sp= (char*) realloc(sp, outmax);
if (sp==NULL) return;
}
sp[outlen++] = residue;
}
sp= (char*) realloc(sp, outlen+1);
if (sp!=NULL) sp[outlen]= '\0';
*seq= sp;
*seqlen= outlen;
SeqPortFree(spp);
return;
}
Int2 Main (void)
{
Int2 m_argModuleIn=0, f_arg_moduleOut=1,
X_argDTDModuleOut=2, T_argTreeDumpOut=3,
v_argPrintFileIn = 4, p_argPrintFileOut = 5,
x_argXMLDataOut=6, d_argBinaryFileIn = 7
, t_argAsnTypeName = 8, e_argBinaryFileOut = 9
, o_argHeadFile = 10, l_argLoadFile = 11
, b_argBufferSize = 12, w_argTokenMax = 13
/*--- args below here are capitilized and for code generation, only--*/
/*-- Except for the 'M' arg, which will also affect normal use ---*/
, G_argGenerateCode = 14, M_argMoreModuleFiles = 15
, B_argCodeFileName = 16, D_argCodeGenDebugLevel = 17
, S_argDebugFileName = 18, I_argExtraIncludeName = 19
, Z_argBitTwiddle = 20, K_argLoadName = 21
, J_objMgrEntry = 22, L_objMgrLabel = 23, P_argXMLmodulePrefix = 24
, V_argChoiceStruct = 25;
AsnIoPtr aip = NULL,
aipout = NULL,
xaipout = NULL,
aipencode = NULL;
FILE * fp;
AsnModulePtr amp = NULL,
currentmod = NULL,
nextmod, thisamp;
AsnTypePtr atp;
Boolean print_each_module = FALSE;
AsnCodeInfoPtr acip = (AsnCodeInfoPtr)MemNew(sizeof(AsnCodeInfo));
CharPtr filename = NULL, p, last_comma, objmgrentry = NULL;
int len;
/* never abort on error, but show it */
ErrSetFatalLevel(SEV_MAX);
ErrSetMessageLevel(SEV_MIN);
asnargs[P_argXMLmodulePrefix].defaultvalue = (const char *)AsnGetXMLmodulePrefix();
if (! GetArgs("AsnTool 4", NUMARGS, asnargs))
return 1;
ErrClear();
AsnSetXMLmodulePrefix((CharPtr)(asnargs[P_argXMLmodulePrefix].strvalue));
/*
if (! GetArgs("AsnTool 4", NUMARGS, asnargs))
return 1;
ErrClear();
*/
if (! AsnIoSetBufsize(NULL, (Int2)asnargs[b_argBufferSize].intvalue))
return 1;
if ((aip = AsnIoOpen(asnargs[m_argModuleIn].strvalue, "r")) == NULL)
{
ErrShow();
return 1;
}
acip -> loadname = asnargs[m_argModuleIn].strvalue;
if (asnargs[K_argLoadName].strvalue != NULL) {
acip -> loadname = asnargs[K_argLoadName].strvalue; /* overrides m_argModuleIn, if set */
}
if (asnargs[e_argBinaryFileOut].strvalue != NULL) /* output a binary value file */
if ((aipencode = AsnIoOpen(asnargs[e_argBinaryFileOut].strvalue, "wb")) == NULL)
{
ErrShow();
return 1;
}
/** parse the module(s) ***/
if (asnargs[f_arg_moduleOut].strvalue != NULL)
{
if ((aipout = AsnIoOpen(asnargs[f_arg_moduleOut].strvalue, "w")) == NULL)
{
ErrShow();
return 1;
}
}
thisamp = NULL;
while ((nextmod = AsnLexTReadModule(aip)) != NULL )
{
if (thisamp == NULL)
thisamp = nextmod;
if (amp == NULL)
amp = nextmod;
else
currentmod->next = nextmod;
currentmod = nextmod;
}
acip -> last_amp = currentmod; /* last module of main file */
AsnStoreTree(acip->loadname, thisamp); /* store and link tree */
/*--- read additional module files that will be used for everything
but code generation.
---*/
if (asnargs[M_argMoreModuleFiles].strvalue != NULL)
for (p = asnargs[M_argMoreModuleFiles].strvalue; *p; p = last_comma + 1) {
/*--- extract next filename for reading ASN.1 definitions ---*/
for (last_comma = p; *last_comma; last_comma++) {
if (*last_comma == ',')
break;
}
len = last_comma - p;
filename = (char *)MemFree (filename);
filename = (char *)MemNew (len + 1);
StringNCpy (filename, p, len);
filename[len] = '\0';
#ifdef WIN_DUMB
printf ("Loading %s \n", filename);
#endif
if ((aip = AsnIoOpen(filename, "r")) == NULL)
{
ErrShow();
return 1;
}
/*--- read the modules in this current file ---*/
thisamp = NULL;
while ((nextmod = AsnLexTReadModule(aip)) != NULL )
{
if (thisamp == NULL)
thisamp = nextmod;
if (amp == NULL)
amp = nextmod;
else
currentmod->next = nextmod;
currentmod = nextmod;
}
AsnStoreTree(filename, thisamp); /* store and link tree */
if (!*last_comma)
break;
aip = AsnIoClose(aip);
}
aip = AsnIoClose(aip);
if (amp == NULL)
{
ErrPostEx(SEV_FATAL,0,0, "Unable to continue due to bad ASN.1 module");
ErrShow();
return 1;
}
if (asnargs[f_arg_moduleOut].strvalue != NULL)
{
if ((aipout = AsnIoOpen(asnargs[f_arg_moduleOut].strvalue, "w")) == NULL)
{
ErrShow();
return 1;
}
currentmod = amp;
do
{
AsnPrintModule(currentmod, aipout);
if (currentmod == acip->last_amp) /* last main module */
currentmod = NULL;
else
currentmod = currentmod->next;
} while (currentmod != NULL);
aipout = AsnIoClose(aipout);
}
if (asnargs[X_argDTDModuleOut].strvalue != NULL)
{
Char tbuf[250];
CharPtr ptr;
if (! StringCmp(asnargs[X_argDTDModuleOut].strvalue, "m"))
{
print_each_module = TRUE;
}
else
{
if ((aipout = AsnIoOpen(asnargs[X_argDTDModuleOut].strvalue, "wx")) == NULL)
{
ErrShow();
return 1;
}
}
currentmod = amp;
do
{
if (print_each_module)
{
StringMove(tbuf, currentmod->modulename);
for (ptr = tbuf; *ptr != '\0'; ptr++)
{
if (*ptr == '-')
*ptr = '_';
}
StringMove(ptr, ".dtd");
AsnPrintModuleXMLInc(currentmod, tbuf);
StringMove(ptr, ".mod");
aipout = AsnIoOpen(tbuf, "wx");
}
AsnPrintModuleXML(currentmod, aipout);
if (print_each_module)
aipout = AsnIoClose(aipout);
if (currentmod == acip->last_amp) /* last main module */
currentmod = NULL;
else
currentmod = currentmod->next;
} while (currentmod != NULL);
if (! print_each_module)
aipout = AsnIoClose(aipout);
}
if (asnargs[T_argTreeDumpOut].strvalue != NULL)
{
if ((fp = FileOpen(asnargs[T_argTreeDumpOut].strvalue, "w")) == NULL)
{
ErrShow();
return 1;
}
currentmod = amp;
do
{
AsnPrintTreeModule(currentmod, fp);
if (currentmod == acip->last_amp) /* last main module */
currentmod = NULL;
else
currentmod = currentmod->next;
} while (currentmod != NULL);
FileClose(fp);
}
acip -> amp = amp;
/* print a value file */
if (asnargs[p_argPrintFileOut].strvalue != NULL)
{
if ((aipout = AsnIoOpen(asnargs[p_argPrintFileOut].strvalue, "w")) == NULL)
{
ErrShow();
return 1;
}
}
/* print an XML file */
if (asnargs[x_argXMLDataOut].strvalue != NULL)
{
if ((xaipout = AsnIoOpen(asnargs[x_argXMLDataOut].strvalue, "wx")) == NULL)
{
ErrShow();
return 1;
}
}
if (asnargs[v_argPrintFileIn].strvalue != NULL) /* read a printvalue file */
{
if ((aip = AsnIoOpen(asnargs[v_argPrintFileIn].strvalue, "r")) == NULL)
{
ErrShow();
return 1;
}
AsnTxtReadValFile(amp, aip, aipout, aipencode, xaipout);
ErrShow();
}
aip = AsnIoClose(aip);
if (asnargs[d_argBinaryFileIn].strvalue != NULL) /* read a ber file */
{
if ((asnargs[t_argAsnTypeName].strvalue == NULL) || (! TO_UPPER(*asnargs[t_argAsnTypeName].strvalue)))
{
ErrPostEx(SEV_FATAL,0,0, "Must use -t Type to define contents of decode file");
ErrShow();
return 1;
}
atp = AsnTypeFind(amp, asnargs[t_argAsnTypeName].strvalue);
if (atp == NULL)
{
#ifdef WIN_MSWIN
ErrPostEx(SEV_FATAL,0,0, "Couldn't find Type %Fs", asnargs[t_argAsnTypeName].strvalue);
#else
ErrPostEx(SEV_FATAL,0,0, "Couldn't find Type %s", asnargs[t_argAsnTypeName].strvalue);
#endif
ErrShow();
return 1;
}
if ((aip = AsnIoOpen(asnargs[d_argBinaryFileIn].strvalue, "rb")) == NULL)
{
ErrShow();
return 1;
}
AsnBinReadValFile(atp, aip, aipout, aipencode, xaipout);
ErrShow();
}
AsnIoClose(xaipout);
AsnIoClose(aipout);
AsnIoClose(aip);
AsnIoClose(aipencode);
if (asnargs[o_argHeadFile].strvalue != NULL) /* produce header file */
AsnOutput(asnargs[o_argHeadFile].strvalue, amp, FALSE, (Int2)asnargs[w_argTokenMax].intvalue);
if (asnargs[l_argLoadFile].strvalue != NULL) /* produce loader file */
AsnOutput(asnargs[l_argLoadFile].strvalue, amp, TRUE, (Int2)asnargs[w_argTokenMax].intvalue);
if (asnargs[G_argGenerateCode ].intvalue != 0)
{
acip -> filename = asnargs[B_argCodeFileName].strvalue;
acip -> do_bit_twiddle = asnargs[Z_argBitTwiddle].intvalue;
acip -> force_choice_struct = asnargs[V_argChoiceStruct].intvalue;
acip -> include_filename = asnargs[I_argExtraIncludeName].strvalue;
acip -> maxDefineLength = asnargs[w_argTokenMax].intvalue;
acip -> debug_level = asnargs[D_argCodeGenDebugLevel ].intvalue;
acip -> object_manager_entry = asnargs[J_objMgrEntry].strvalue;
acip -> object_label = asnargs[L_objMgrLabel].strvalue;
if (asnargs[S_argDebugFileName].strvalue != NULL) {
(acip -> bug_fp) = FileOpen (asnargs[S_argDebugFileName].strvalue, "w");
} else {
(acip -> bug_fp) = FileOpen ("stderr", "w");
}
AsnCode(acip);
}
MemFree(acip);
MemFree(filename);
return 0;
}
Int2 LIBCALLBACK VSMGenericBinAsnOpen ( Pointer data )
{
Char filename[255];
AsnIoPtr aip;
Pointer ptr;
Uint2 entityID;
Int2 ct, i, retval = OM_MSG_RET_OK;
ObjMgrPtr omp;
ObjMgrTypePtr omtp = NULL;
OMProcControlPtr ompcp;
WindoW w;
GrouP g;
ButtoN b;
VSMReadBinStr vrb;
VSeqMgrPtr vsmp;
ompcp = (OMProcControlPtr)data;
vsmp = VSeqMgrGet();
omp = vsmp->omp;
filename[0] = '\0';
if (GetInputFileName(filename, (size_t)254, NULL, NULL))
{
vrb.do_it = FALSE;
vrb.window_done = FALSE;
vrb.the_type = 0;
w = ModalWindow (-50, -33, -10, -10, NULL);
SetWindowExtra(w, &vrb, NULL);
g = HiddenGroup(w, 0, 2, NULL);
StaticPrompt(g, "Select ASN.1 type:", 0,0,systemFont,'l');
vrb.p = PopupList(g, TRUE, NULL);
i = 0;
ct = 0;
omtp = NULL;
while ((omtp = ObjMgrTypeFindNext(omp, omtp)) != NULL)
{
if (omtp->asnname != NULL)
{
i++;
PopupItem(vrb.p, omtp->asnname);
if (! StringCmp(vsmp->lastASNtype, omtp->asnname))
ct = i;
}
}
if (! i)
{
ErrPostEx(SEV_ERROR,0,0, "No ASN.1 types are registered");
Remove(w);
return OM_MSG_RET_ERROR;
}
if (! ct)
ct = 1;
SetValue(vrb.p, ct);
g = HiddenGroup(w, 2, 0, NULL);
DefaultButton(g, "Accept", AsnBinAcceptProc);
b = PushButton(g, "Cancel", AsnBinCancelProc);
Show(w);
Nlm_WaitForCondition (! vrb.window_done);
ProcessAnEvent();
if (! vrb.do_it)
return retval;
i = 0;
omtp = NULL;
while ((omtp = ObjMgrTypeFindNext(omp, omtp)) != NULL)
{
i++;
if (i == vrb.the_type)
break;
}
if (omtp == NULL)
{
ErrPostEx(SEV_ERROR,0,0,"Couldn't find vrb.the_type");
return OM_MSG_RET_ERROR;
}
StringMove(vsmp->lastASNtype, omtp->asnname);
WatchCursor();
aip = AsnIoOpen(filename, "rb");
ptr = (*(omtp->asnread))(aip, NULL);
AsnIoClose(aip);
if (ptr == NULL)
{
ErrPostEx(SEV_ERROR,0,0,"Couldn't read [%s], type [%s]", filename, omtp->asnname);
retval = OM_MSG_RET_ERROR;
}
else
{
entityID = ObjMgrRegister(omtp->datatype, ptr);
ompcp->output_data = ptr;
ompcp->output_entityID = entityID;
PromoteToSeqEntry (entityID, omtp->datatype, ptr);
retval = OM_MSG_RET_DONE;
}
ArrowCursor();
}
else
retval = OM_MSG_RET_OK;
return retval;
}
