void StereoCalib(const vector<string>& imagelist, Size boardSize, bool useCalibrated=true, bool showRectified=true)
{
if( imagelist.size() % 2 != 0 )
{
cout << "Error: the image list contains odd (non-even) number of elements\n";
return;
}
printf("board size: %d x %d", boardSize.width, boardSize.height);
bool displayCorners = true;
const int maxScale = 2;
const float squareSize = 1.f; // Set this to your actual square size
// ARRAY AND VECTOR STORAGE:
vector<vector<Point2f> > imagePoints[2];
vector<vector<Point3f> > objectPoints;
Size imageSize;
int i, j, k, nimages = (int)imagelist.size()/2;
imagePoints[0].resize(nimages);
imagePoints[1].resize(nimages);
vector<string> goodImageList;
for( i = j = 0; i < nimages; i++ )
{
for( k = 0; k < 2; k++ )
{
const string& filename = imagelist[i*2+k];
Mat img = imread(filename, 0);
if(img.empty())
break;
if( imageSize == Size() )
imageSize = img.size();
else if( img.size() != imageSize )
{
cout << "The image " << filename << " has the size different from the first image size. Skipping the pair\n";
break;
}
bool found = false;
vector<Point2f>& corners = imagePoints[k][j];
for( int scale = 1; scale <= maxScale; scale++ )
{
Mat timg;
if( scale == 1 )
timg = img;
else
resize(img, timg, Size(), scale, scale);
found = findChessboardCorners(timg, boardSize, corners,
CV_CALIB_CB_ADAPTIVE_THRESH | CV_CALIB_CB_NORMALIZE_IMAGE);
if( found )
{
if( scale > 1 )
{
Mat cornersMat(corners);
cornersMat *= 1./scale;
}
break;
}
}
if( displayCorners )
{
cout << filename << endl;
Mat cimg, cimg1;
cvtColor(img, cimg, CV_GRAY2BGR);
drawChessboardCorners(cimg, boardSize, corners, found);
double sf = 640./MAX(img.rows, img.cols);
resize(cimg, cimg1, Size(), sf, sf);
imshow("corners", cimg1);
char c = (char)waitKey(500);
if( c == 27 || c == 'q' || c == 'Q' ) //Allow ESC to quit
exit(-1);
}
else
putchar('.');
if( !found )
break;
cornerSubPix(img, corners, Size(11,11), Size(-1,-1),
TermCriteria(CV_TERMCRIT_ITER+CV_TERMCRIT_EPS,
30, 0.01));
}
if( k == 2 )
{
goodImageList.push_back(imagelist[i*2]);
goodImageList.push_back(imagelist[i*2+1]);
j++;
}
}
cout << j << " pairs have been successfully detected.\n";
nimages = j;
if( nimages < 2 )
{
cout << "Error: too little pairs to run the calibration\n";
return;
}
imagePoints[0].resize(nimages);
imagePoints[1].resize(nimages);
objectPoints.resize(nimages);
for( i = 0; i < nimages; i++ )
{
for( j = 0; j < boardSize.height; j++ )
for( k = 0; k < boardSize.width; k++ )
objectPoints[i].push_back(Point3f(j*squareSize, k*squareSize, 0));
}
cout << "Running stereo calibration ...\n";
Mat cameraMatrix[2], distCoeffs[2];
cameraMatrix[0] = Mat::eye(3, 3, CV_64F);
cameraMatrix[1] = Mat::eye(3, 3, CV_64F);
Mat R, T, E, F;
double rms = stereoCalibrate(objectPoints, imagePoints[0], imagePoints[1],
cameraMatrix[0], distCoeffs[0],
cameraMatrix[1], distCoeffs[1],
imageSize, R, T, E, F,
TermCriteria(CV_TERMCRIT_ITER+CV_TERMCRIT_EPS, 100, 1e-5),
CV_CALIB_FIX_ASPECT_RATIO +
CV_CALIB_ZERO_TANGENT_DIST +
//CV_CALIB_SAME_FOCAL_LENGTH +
CV_CALIB_RATIONAL_MODEL +
CV_CALIB_FIX_K3 + CV_CALIB_FIX_K4 + CV_CALIB_FIX_K5);
cout << "done with RMS error=" << rms << endl;
// CALIBRATION QUALITY CHECK
// because the output fundamental matrix implicitly
// includes all the output information,
// we can check the quality of calibration using the
// epipolar geometry constraint: m2^t*F*m1=0
double err = 0;
int npoints = 0;
vector<Vec3f> lines[2];
for( i = 0; i < nimages; i++ )
{
int npt = (int)imagePoints[0][i].size();
Mat imgpt[2];
for( k = 0; k < 2; k++ )
{
imgpt[k] = Mat(imagePoints[k][i]);
undistortPoints(imgpt[k], imgpt[k], cameraMatrix[k], distCoeffs[k], Mat(), cameraMatrix[k]);
computeCorrespondEpilines(imgpt[k], k+1, F, lines[k]);
}
for( j = 0; j < npt; j++ )
{
double errij = fabs(imagePoints[0][i][j].x*lines[1][j][0] +
imagePoints[0][i][j].y*lines[1][j][1] + lines[1][j][2]) +
fabs(imagePoints[1][i][j].x*lines[0][j][0] +
imagePoints[1][i][j].y*lines[0][j][1] + lines[0][j][2]);
err += errij;
}
npoints += npt;
}
cout << "average reprojection err = " << err/npoints << endl;
// save intrinsic parameters
FileStorage fs("calib/intrinsics.yml", CV_STORAGE_WRITE);
if( fs.isOpened() )
{
fs << "M1" << cameraMatrix[0] << "D1" << distCoeffs[0] <<
"M2" << cameraMatrix[1] << "D2" << distCoeffs[1];
fs.release();
}
else
cout << "Error: can not save the intrinsic parameters\n";
Mat R1, R2, P1, P2, Q;
Rect validRoi[2];
stereoRectify(cameraMatrix[0], distCoeffs[0],
cameraMatrix[1], distCoeffs[1],
imageSize, R, T, R1, R2, P1, P2, Q,
CALIB_ZERO_DISPARITY, 1, imageSize, &validRoi[0], &validRoi[1]);
fs.open("calib/extrinsics.yml", CV_STORAGE_WRITE);
if( fs.isOpened() )
{
fs << "R" << R << "T" << T << "R1" << R1 << "R2" << R2 << "P1" << P1 << "P2" << P2 << "Q" << Q;
fs.release();
}
else
cout << "Error: can not save the intrinsic parameters\n";
// OpenCV can handle left-right
// or up-down camera arrangements
bool isVerticalStereo = fabs(P2.at<double>(1, 3)) > fabs(P2.at<double>(0, 3));
// COMPUTE AND DISPLAY RECTIFICATION
if( !showRectified )
return;
Mat rmap[2][2];
// IF BY CALIBRATED (BOUGUET'S METHOD)
if( useCalibrated )
{
// we already computed everything
}
// OR ELSE HARTLEY'S METHOD
else
// use intrinsic parameters of each camera, but
// compute the rectification transformation directly
// from the fundamental matrix
{
vector<Point2f> allimgpt[2];
for( k = 0; k < 2; k++ )
{
for( i = 0; i < nimages; i++ )
std::copy(imagePoints[k][i].begin(), imagePoints[k][i].end(), back_inserter(allimgpt[k]));
}
F = findFundamentalMat(Mat(allimgpt[0]), Mat(allimgpt[1]), FM_8POINT, 0, 0);
Mat H1, H2;
stereoRectifyUncalibrated(Mat(allimgpt[0]), Mat(allimgpt[1]), F, imageSize, H1, H2, 3);
R1 = cameraMatrix[0].inv()*H1*cameraMatrix[0];
R2 = cameraMatrix[1].inv()*H2*cameraMatrix[1];
P1 = cameraMatrix[0];
P2 = cameraMatrix[1];
}
//Precompute maps for cv::remap()
initUndistortRectifyMap(cameraMatrix[0], distCoeffs[0], R1, P1, imageSize, CV_16SC2, rmap[0][0], rmap[0][1]);
initUndistortRectifyMap(cameraMatrix[1], distCoeffs[1], R2, P2, imageSize, CV_16SC2, rmap[1][0], rmap[1][1]);
Mat canvas;
double sf;
int w, h;
if( !isVerticalStereo )
{
sf = 600./MAX(imageSize.width, imageSize.height);
w = cvRound(imageSize.width*sf);
h = cvRound(imageSize.height*sf);
canvas.create(h, w*2, CV_8UC3);
}
else
{
sf = 300./MAX(imageSize.width, imageSize.height);
w = cvRound(imageSize.width*sf);
h = cvRound(imageSize.height*sf);
canvas.create(h*2, w, CV_8UC3);
}
for( i = 0; i < nimages; i++ )
{
for( k = 0; k < 2; k++ )
{
Mat img = imread(goodImageList[i*2+k], 0), rimg, cimg;
remap(img, rimg, rmap[k][0], rmap[k][1], CV_INTER_LINEAR);
cvtColor(rimg, cimg, CV_GRAY2BGR);
Mat canvasPart = !isVerticalStereo ? canvas(Rect(w*k, 0, w, h)) : canvas(Rect(0, h*k, w, h));
resize(cimg, canvasPart, canvasPart.size(), 0, 0, CV_INTER_AREA);
if( useCalibrated )
{
Rect vroi(cvRound(validRoi[k].x*sf), cvRound(validRoi[k].y*sf),
cvRound(validRoi[k].width*sf), cvRound(validRoi[k].height*sf));
rectangle(canvasPart, vroi, Scalar(0,0,255), 3, 8);
}
}
if( !isVerticalStereo )
for( j = 0; j < canvas.rows; j += 16 )
line(canvas, Point(0, j), Point(canvas.cols, j), Scalar(0, 255, 0), 1, 8);
else
for( j = 0; j < canvas.cols; j += 16 )
line(canvas, Point(j, 0), Point(j, canvas.rows), Scalar(0, 255, 0), 1, 8);
imshow("rectified", canvas);
char c = (char)waitKey();
if( c == 27 || c == 'q' || c == 'Q' )
break;
}
}
KDvoid CornerSubPix ( KDint nIdx )
{
string sMsg;
KDchar szStr [ 256 ];
Mat tSrc;
Mat tDst;
Mat tGray;
KDint nThresh;
RNG tRng ( 12345 );
nThresh = 205;
// Load source image and convert it to gray
tSrc = imread ( "/res/image/apple.png" );
cvtColor ( tSrc, tGray, CV_BGR2GRAY );
//
// Apply Shi-Tomasi corner detector
//
// Parameters for Shi-Tomasi algorithm
vector<Point2f> aCorners;
KDdouble dQualityLevel = 0.01;
KDdouble dMinDistance = 10;
KDint nMaxCorners = 4;
KDint nBlockSize = 3;
bool bUseHarrisDetector = false;
KDdouble dK = 0.04;
// Copy the source image
tDst = tSrc.clone ( );
// Apply corner detection
goodFeaturesToTrack ( tGray, aCorners, nMaxCorners, dQualityLevel, dMinDistance, Mat ( ), nBlockSize, bUseHarrisDetector, dK );
// Draw corners detected
kdSprintfKHR ( szStr, "** Number of corners detected: %d\n", aCorners.size ( ) );
sMsg = szStr;
KDint nR = 4;
for ( KDuint i = 0; i < aCorners.size ( ); i++ )
{
circle ( tDst, aCorners [ i ], nR, Scalar ( tRng.uniform ( 0, 255 ), tRng.uniform ( 0, 255 ), tRng.uniform ( 0, 255 ) ), -1, 8, 0 );
}
// Set the neeed parameters to find the refined corners
Size tWinSize = Size ( 5, 5 );
Size tZeroZone = Size ( -1, -1 );
TermCriteria tCriteria = TermCriteria ( CV_TERMCRIT_EPS + CV_TERMCRIT_ITER, 40, 0.001 );
// Calculate the refined corner locations
cornerSubPix ( tGray, aCorners, tWinSize, tZeroZone, tCriteria );
// Write them down
for ( KDuint i = 0; i < aCorners.size ( ); i++ )
{
kdSprintfKHR ( szStr, " -- Refined Corner [%d] ( %.3f, %.3f )\n", i, aCorners [ i ].x, aCorners [ i ].y );
sMsg += szStr;
}
g_pController->setFrame ( 1, tSrc );
g_pController->setFrame ( 2, tDst );
g_pController->setMessage ( sMsg.c_str ( ) );
}
/**
* Find a list of candidate marker from a given scene
*
* @param current frame, in grayscale 8UC1 format
* @return a list of marker candidates
**/
vector<Marker> MarkerDetector::findMarkerCandidates( Mat& frame ) {
vector<Marker> candidates;
/* Do some thresholding, in fact you should tune the parameters here a bit */
Mat thresholded;
threshold( frame, thresholded, 50.0, 255.0, CV_THRESH_BINARY );
/* Find contours */
vector<vector<Point>> contours;
findContours( thresholded.clone(), contours, CV_RETR_LIST, CV_CHAIN_APPROX_NONE );
for( vector<Point> contour: contours ) {
/* Approximate polygons out of these contours */
vector<Point> approxed;
approxPolyDP( contour, approxed, contour.size() * 0.05, true );
/* Make sure it passes our first candidate check */
if( !checkPoints( approxed ) )
continue;
/* Do some perspective transformation on the candidate marker to a predetermined square */
Marker marker;
marker.matrix = Mat( markerHeight, markerWidth, CV_8UC1 );
std::copy( approxed.begin(), approxed.end(), back_inserter( marker.poly ) );
/* Apply sub pixel search */
cornerSubPix( thresholded, marker.poly, Size(5, 5), Size(-1, -1), TermCriteria(CV_TERMCRIT_EPS + CV_TERMCRIT_ITER, 40, 0.001) );
/* Projection target */
const static vector<Point2f> target_corners = {
Point2f( -0.5f, -0.5f ),
Point2f( +5.5f, -0.5f ),
Point2f( +5.5f, +5.5f ),
Point2f( -0.5f, +5.5f ),
};
/* Apply perspective transformation, to project our 3D marker to a predefined 2D coords */
Mat projection = getPerspectiveTransform( marker.poly, target_corners );
warpPerspective( thresholded, marker.matrix, projection, marker.matrix.size() );
/* Ignore those region that's fully black, or not surrounded by black bars */
if( sum(marker.matrix) == Scalar(0) ||
countNonZero( marker.matrix.row(0)) != 0 ||
countNonZero( marker.matrix.row(markerHeight - 1)) != 0 ||
countNonZero( marker.matrix.col(0)) != 0 ||
countNonZero( marker.matrix.col(markerWidth - 1)) != 0 ) {
continue;
}
/* Find the rotation that has the smallest hex value */
pair<unsigned int, unsigned int> minimum = { numeric_limits<unsigned int>::max(), 0 };
vector<unsigned int> codes(markerHeight);
unsigned int power = 1 << (markerWidth - 3);
/* Rotate the marker 4 times, store the hex code upon each rotation */
for( int rotation = 0; rotation < 4; rotation++ ) {
stringstream ss;
codes[rotation] = 0;
for( int i = 1; i < markerHeight - 1; i++ ) {
unsigned int code = 0;
for ( int j = 1; j < markerWidth - 1; j++ ){
int value = static_cast<int>(marker.matrix.at<uchar>(i, j));
if( value == 0 )
code = code + ( power >> j );
}
ss << hex << code;
}
ss >> codes[rotation];
if( minimum.first > codes[rotation] ) {
minimum.first = codes[rotation];
minimum.second = rotation;
}
flip( marker.matrix, marker.matrix, 1 );
marker.matrix = marker.matrix.t();
}
rotate( marker.poly.begin(), marker.poly.begin() + ((minimum.second + 2) % 4), marker.poly.end() );
for( int i = 0; i < minimum.second; i++ ) {
flip( marker.matrix, marker.matrix, 1 );
marker.matrix = marker.matrix.t();
}
marker.code = minimum.first;
candidates.push_back( marker );
}
return candidates;
}
AppTemplate::AppTemplate(const Mat* frame_set, const Rect iniWin,int ID)
:ID(ID)//bgr,hsv,lab
{
//get roi out of frame set
Rect body_win=scaleWin(iniWin,1/TRACKING_TO_BODYSIZE_RATIO);
Rect roi_win(body_win.x-body_win.width,body_win.y-body_win.width,3*body_win.width,2*body_win.width+body_win.height);
body_win= body_win&Rect(0,0,frame_set[0].cols,frame_set[0].rows);
roi_win=roi_win&Rect(0,0,frame_set[0].cols,frame_set[0].rows);
Mat roi_set[]={Mat(frame_set[0],roi_win),Mat(frame_set[1],roi_win),Mat(frame_set[2],roi_win)};
Rect iniWin_roi=iniWin-Point(roi_win.x,roi_win.y);
//scores for each channel
list<ChannelScore> channel_score;
Mat mask_roi(roi_set[0].rows,roi_set[0].cols,CV_8UC1,Scalar(0));
rectangle(mask_roi,iniWin_roi,Scalar(255),-1);
Mat inv_mask_roi(roi_set[0].rows,roi_set[0].cols,CV_8UC1,Scalar(255));
rectangle(inv_mask_roi,body_win-Point(roi_win.x,roi_win.y),Scalar(0),-1);
//calculate score for each channel
Mat temp_hist;
Mat temp_bp;
int hist_size[]={BIN_NUMBER};
for (int i=0;i<9;i++)
{
float range1[]={0,255};
if (i==3)
{
range1[1]=179;
}
const float* hist_range[]={range1};
calcHist(roi_set,3,&i,inv_mask_roi,temp_hist,1,hist_size,hist_range);
normalize(temp_hist,temp_hist,255,0.0,NORM_L1);//scale to 255 for display
calcBackProject(roi_set,3,&i,temp_hist,temp_bp,hist_range);
int c[]={0};
int hs[]={BIN_NUMBER};
float hr[]={0,255};
const float* hrr[]={hr};
Mat hist_fore;
Mat hist_back;
calcHist(&temp_bp,1,c,mask_roi,hist_fore,1,hs,hrr);
calcHist(&temp_bp,1,c,inv_mask_roi,hist_back,1,hs,hrr);
normalize(hist_fore,hist_fore,1.0,0.0,NORM_L1);
normalize(hist_back,hist_back,1.0,0.0,NORM_L1);
//deal with gray image to get rid of #IND
double score=getVR(hist_back,hist_fore);
score=score==score ? score:0;
channel_score.push_back(ChannelScore(i,score));
}
//choose the 2 highest scored channels
channel_score.sort(compareChannel);
channels[0]=channel_score.back().idx;
channel_score.pop_back();
channels[1]=channel_score.back().idx;
//using 2 best channel to calculate histogram
for (int i=0;i<2;++i)
{
_hRang[i][0]=0;
if (channels[i]==3)
_hRang[i][1]=179;
else
_hRang[i][1]=255;
hRange[i]=_hRang[i];
}
calcHist(roi_set,3,channels,inv_mask_roi,temp_hist,2,hSize,hRange);
normalize(temp_hist,temp_hist,255,0,NORM_L1);
Mat final_mask;//mask for sampling
calcBackProject(roi_set,3,channels,temp_hist,final_mask,hRange);
threshold(final_mask,final_mask,5,255,CV_THRESH_BINARY_INV);
final_mask=min(final_mask,mask_roi);
//choose the best two feature space for foreground****************
Mat hist_fore,hist_back;
channel_score.clear();
double sum_score=0;
for (int i=0;i<9;i++)
{
float range1[]={0,255};
if (i==3)
{
range1[1]=179;
}
const float* hist_range[]={range1};
Mat temp_hist_neg;
calcHist(roi_set,3,&i,final_mask,temp_hist,1,hist_size,hist_range);
normalize(temp_hist,temp_hist,255,0,NORM_L1);
calcHist(roi_set,3,&i,inv_mask_roi,temp_hist_neg,1,hist_size,hist_range);
normalize(temp_hist_neg,temp_hist_neg,255,0,NORM_L1);
log(temp_hist,temp_hist);
log(temp_hist_neg,temp_hist_neg);
temp_hist=temp_hist-temp_hist_neg;
threshold(temp_hist,temp_hist,0,255,CV_THRESH_TOZERO);
normalize(temp_hist,temp_hist,255,0.0,NORM_L1);//scale to 255 for display
calcBackProject(roi_set,3,&i,temp_hist,temp_bp,hist_range);
int c[]={0};
int hs[]={BIN_NUMBER};
float hr[]={0,255};
const float* hrr[]={hr};
calcHist(&temp_bp,1,c,final_mask,hist_fore,1,hs,hrr);
calcHist(&temp_bp,1,c,inv_mask_roi,hist_back,1,hs,hrr);
normalize(hist_fore,hist_fore,1.0,0.0,NORM_L1);
normalize(hist_back,hist_back,1.0,0.0,NORM_L1);
double score=getVR(hist_back,hist_fore);
score=score==score ? score:0;
channel_score.push_back(ChannelScore(i,score));
sum_score+=exp(score);
}
channel_score.sort(compareChannel);
channels[0]=channel_score.back().idx;
channel_score.pop_back();
channels[1]=channel_score.back().idx;
for (int i=0;i<2;++i)
{
_hRang[i][0]=0;
if (channels[i]==3)
_hRang[i][1]=179;
else
_hRang[i][1]=255;
hRange[i]=_hRang[i];
}
calcHist(roi_set,3,channels,final_mask,hist,2,hSize,hRange);///////////////////
normalize(hist,hist,255,0,NORM_L1);
//recover the shift_vector
Mat backPro;
calcBackProject(roi_set,3,channels,hist,backPro,hRange);
iniWin_roi=iniWin-Point(roi_win.x,roi_win.y);
Point2f origin_point_roi((float)(iniWin_roi.x+0.5*iniWin_roi.width),(float)(iniWin_roi.y+0.5*iniWin_roi.height));
meanShift(backPro,iniWin_roi,TermCriteria( CV_TERMCRIT_EPS | CV_TERMCRIT_ITER, 10, 1 ));
Point2f shift_point_roi((float)(iniWin_roi.x+0.5*iniWin_roi.width),(float)(iniWin_roi.y+0.5*iniWin_roi.height));
shift_vector=(shift_point_roi-origin_point_roi)*(1/(float)iniWin.width);
}
Mat TableObjectDetector::clusterObjects(Mat P, int K, bool removeOutliers) {
Mat L;
int attempts = 5;
P.convertTo(P, CV_32F);
kmeans(P, K, L, TermCriteria(CV_TERMCRIT_ITER|CV_TERMCRIT_EPS, 10000, 0.0001), attempts, KMEANS_PP_CENTERS);
// We remove outliers that are outside a number of standard deviations away
// from the object centroid. We do this by just setting their cluster label
// to -1
if (removeOutliers) {
float numStdDevs = 3;
float maxDist = 0.1;
// Caluclate centroids
vector<Mat> clusterData;
Mat clusterCentroids(K, 3, CV_32F);
for (int k=0; k<K; k++) {
Mat D = Mat(0, 3, CV_64F);
for (int i=0; i<L.rows; i++) {
if (L.at<int>(i)==k) {
D.push_back(P.row(i));
}
}
clusterData.push_back(D);
reduce(D, clusterCentroids.row(k), 0, CV_REDUCE_AVG);
}
// Now calculate distances of each point, and the std. devs. of each
// cluster
Mat Dist = Mat::zeros(P.rows, 1, CV_32F);
vector<Mat> centroidDistances;
for (int k=0; k<K; k++) {
centroidDistances.push_back(Mat(0, 1, CV_32F));
}
for (int i=0; i<L.rows; i++) {
Mat centroid = clusterCentroids.row(L.at<int>(i));
Mat pt = P.row(i);
int k = L.at<int>(i);
float d = std::sqrt(
std::pow(pt.at<float>(0) - centroid.at<float>(0), 2) +
std::pow(pt.at<float>(1) - centroid.at<float>(1), 2) +
std::pow(pt.at<float>(2) - centroid.at<float>(2), 2) );
Dist.at<float>(i) = d;
centroidDistances.at(k).push_back(d);
}
for (int k=0; k<K; k++) {
Mat ignore;
Mat std_dev;
meanStdDev(centroidDistances.at(k), ignore, std_dev);
float k_std = std_dev.at<Scalar>(0)(0);
for (int i=0; i<P.rows; i++) {
if (L.at<int>(i) == k) {
//if (Dist.at<float>(i) > numStdDevs*k_std) {
if (Dist.at<float>(i) > maxDist) {
L.at<int>(i) = -1;
}
}
}
}
// Now compute standard deviations for all clusters
//Mat centroidStdDevs = Mat::zeros(K, 1);
//for (int k=0; k<K; k++) {
//}
}
return L;
}
/**
* Run hierarchical k-means with a distance threshold of 0.15 meters
*/
Mat TableObjectDetector::clusterObjectsHierarchical(cv::Mat P, int max_clusters) {
Mat L = Mat::zeros (P.rows, 1, CV_32S);
double dthresh = 0.15;
int currentClusterNum = 0;
int num_iter = 30;
std::stack<Cluster*> c_stack;
// Initialize with a single cluster containing all datapoints
Cluster* C = new Cluster();
Mat D = Mat(P.rows, 4, CV_64F);
P.copyTo(D.colRange(0, 3));
// ID each point so we return them in the same order
for (int i=0; i<D.rows; i++) {
D.at<double>(i, 3) = i;
}
C->setData(D);
c_stack.push(C);
// Run hierarchical k-means
for (int t=0; t<num_iter; t++) {
if (currentClusterNum == max_clusters) {
return L;
}
if (c_stack.empty()) {
return L;
}
Cluster* C = (Cluster*)c_stack.top();
c_stack.pop();
Mat D = C->getData();
// Calculate cluster centroid
Mat Cmean; reduce(D, Cmean, 0, CV_REDUCE_AVG);
// Calculate max distance
double maxDist = 0;
for (int i=0; i<D.rows; i++) {
double dx = D.at<double>(i, 0) - Cmean.at<double>(0);
double dy = D.at<double>(i, 1) - Cmean.at<double>(1);
double dz = D.at<double>(i, 2) - Cmean.at<double>(2);
double dist = sqrt(dx*dx + dy*dy + dz*dz);
if (dist > maxDist) {
maxDist = dist;
}
}
// Check to see if this cluster satisfies the conditions
if (maxDist < dthresh) {
for (int i=0; i<D.rows; i++) {
int idx = (int)D.at<double>(i, 3);
L.at<int>(idx) = currentClusterNum;
}
currentClusterNum++;
} else {
Mat L_iter;
int attempts = 5;
Mat D32 = Mat(D.rows, 3, CV_64F);
D.colRange(0, 3).copyTo(D32);
D32.convertTo(D32, CV_32F);
kmeans(D32, 2, L_iter, TermCriteria(CV_TERMCRIT_ITER|CV_TERMCRIT_EPS, 10000, 0.0001), attempts, KMEANS_PP_CENTERS);
Mat D0 = Mat(0, 3, CV_64F);
Mat D1 = Mat(0, 3, CV_64F);
for (int i=0; i<L_iter.rows; i++) {
if (L_iter.at<int>(i) == 0) {
D0.push_back(D.row(i));
} else {
D1.push_back(D.row(i));
}
}
Cluster* C0 = new Cluster();
C0->setData(D0);
Cluster* C1 = new Cluster();
C1->setData(D1);
c_stack.push(C0);
c_stack.push(C1);
}
}
return L;
}
* \f$R_i, T_i\f$ are concatenated 1x3 vectors.
* @param perViewErrors Output vector of average re-projection errors estimated for each pattern view.
* @param flags flags Different flags for the calibration process (see #calibrateCamera for details).
* @param criteria Termination criteria for the iterative optimization algorithm.
*
* This function calibrates a camera using a set of corners of a Charuco Board. The function
* receives a list of detected corners and its identifiers from several views of the Board.
* The function returns the final re-projection error.
*/
CV_EXPORTS_AS(calibrateCameraCharucoExtended) double calibrateCameraCharuco(
InputArrayOfArrays charucoCorners, InputArrayOfArrays charucoIds, const Ptr<CharucoBoard> &board,
Size imageSize, InputOutputArray cameraMatrix, InputOutputArray distCoeffs,
OutputArrayOfArrays rvecs, OutputArrayOfArrays tvecs,
OutputArray stdDeviationsIntrinsics, OutputArray stdDeviationsExtrinsics,
OutputArray perViewErrors, int flags = 0,
TermCriteria criteria = TermCriteria(TermCriteria::COUNT + TermCriteria::EPS, 30, DBL_EPSILON));
/** @brief It's the same function as #calibrateCameraCharuco but without calibration error estimation.
*/
CV_EXPORTS_W double calibrateCameraCharuco(
InputArrayOfArrays charucoCorners, InputArrayOfArrays charucoIds, const Ptr<CharucoBoard> &board,
Size imageSize, InputOutputArray cameraMatrix, InputOutputArray distCoeffs,
OutputArrayOfArrays rvecs = noArray(), OutputArrayOfArrays tvecs = noArray(), int flags = 0,
TermCriteria criteria = TermCriteria(TermCriteria::COUNT + TermCriteria::EPS, 30, DBL_EPSILON));
/**
* @brief Detect ChArUco Diamond markers
*
* @param image input image necessary for corner subpixel.
///////////////////////////////////////////////////////
// Panel::CalibrateCamera() Description
///////////////////////////////////////////////////////
void Panel::CalibrateCamera(string sFilePath)
{
help();
//! [file_read]
Settings s;
const string inputSettingsFile = sFilePath;
FileStorage fs(inputSettingsFile, FileStorage::READ); // Read the settings
if (!fs.isOpened())
{
cout << "Could not open the configuration file: \"" << inputSettingsFile << "\"" << endl;
// return -1;
}
fs["Settings"] >> s;
fs.release(); // close Settings file
//! [file_read]
//FileStorage fout("settings.yml", FileStorage::WRITE); // write config as YAML
//fout << "Settings" << s;
if (!s.goodInput)
{
cout << "Invalid input detected. Application stopping. " << endl;
// return -1;
}
vector<vector<Point2f> > imagePoints;
Mat cameraMatrix, distCoeffs;
Size imageSize;
int mode = s.inputType == Settings::IMAGE_LIST ? CAPTURING : DETECTION;
clock_t prevTimestamp = 0;
const Scalar RED(0, 0, 255), GREEN(0, 255, 0);
const char ESC_KEY = 27;
int counter = 1;
//! [get_input]
for (;;)
{
Mat view;
bool blinkOutput = false;
view = s.nextImage();
//----- If no more image, or got enough, then stop calibration and show result -------------
if (mode == CAPTURING && imagePoints.size() >= (size_t)s.nrFrames)
{
if (runCalibrationAndSave(s, imageSize, cameraMatrix, distCoeffs, imagePoints))
mode = CALIBRATED;
else
mode = DETECTION;
}
if (view.empty()) // If there are no more images stop the loop
{
// if calibration threshold was not reached yet, calibrate now
if (mode != CALIBRATED && !imagePoints.empty())
runCalibrationAndSave(s, imageSize, cameraMatrix, distCoeffs, imagePoints);
break;
}
//! [get_input]
imageSize = view.size(); // Format input image.
if (s.flipVertical) flip(view, view, 0);
//! [find_pattern]
vector<Point2f> pointBuf;
bool found;
switch (s.calibrationPattern) // Find feature points on the input format
{
case Settings::CHESSBOARD:
found = findChessboardCorners(view, s.boardSize, pointBuf,
CALIB_CB_ADAPTIVE_THRESH | CALIB_CB_FAST_CHECK | CALIB_CB_NORMALIZE_IMAGE);
break;
case Settings::CIRCLES_GRID:
found = findCirclesGrid(view, s.boardSize, pointBuf);
break;
case Settings::ASYMMETRIC_CIRCLES_GRID:
found = findCirclesGrid(view, s.boardSize, pointBuf, CALIB_CB_ASYMMETRIC_GRID);
break;
default:
found = false;
break;
}
//! [find_pattern]
//! [pattern_found]
if (found) // If done with success,
{
// improve the found corners' coordinate accuracy for chessboard
if (s.calibrationPattern == Settings::CHESSBOARD)
{
Mat viewGray;
cvtColor(view, viewGray, COLOR_BGR2GRAY);
cornerSubPix(viewGray, pointBuf, Size(11, 11),
Size(-1, -1), TermCriteria(TermCriteria::EPS + TermCriteria::COUNT, 30, 0.1));
}
if (mode == CAPTURING && // For camera only take new samples after delay time
(!s.inputCapture.isOpened() || clock() - prevTimestamp > s.delay*1e-3*CLOCKS_PER_SEC))
{
imagePoints.push_back(pointBuf);
prevTimestamp = clock();
blinkOutput = s.inputCapture.isOpened();
}
// Draw the corners.
drawChessboardCorners(view, s.boardSize, Mat(pointBuf), found);
}
//! [pattern_found]
//----------------------------- Output Text ------------------------------------------------
//! [output_text]
string msg = (mode == CAPTURING) ? "100/100" :
mode == CALIBRATED ? "Calibrated" : "Press 'g' to start";
int baseLine = 0;
Size textSize = getTextSize(msg, 1, 1, 1, &baseLine);
Point textOrigin(view.cols - 2 * textSize.width - 10, view.rows - 2 * baseLine - 10);
if (mode == CAPTURING)
{
if (s.showUndistorsed)
msg = format("%d/%d Undist", (int)imagePoints.size(), s.nrFrames);
else
msg = format("%d/%d", (int)imagePoints.size(), s.nrFrames);
}
putText(view, msg, textOrigin, 1, 1, mode == CALIBRATED ? GREEN : RED);
if (blinkOutput)
bitwise_not(view, view);
//! [output_text]
//------------------------- Video capture output undistorted ------------------------------
//! [output_undistorted]
if (mode == CALIBRATED && s.showUndistorsed)
{
Mat temp = view.clone();
undistort(temp, view, cameraMatrix, distCoeffs);
}
//! [output_undistorted]
//------------------------------ Show image and check for input commands -------------------
//! [await_input]
namedWindow("Image View" + to_string(counter), WINDOW_NORMAL);
resizeWindow("Image View" + to_string(counter), 640, 480);
imshow("Image View" + to_string(counter), view);
char key = (char)waitKey(s.inputCapture.isOpened() ? 50 : s.delay);
cout << "Image " << to_string(counter) << " Completed" << endl;
counter++;
if (key == ESC_KEY)
break;
if (key == 'u' && mode == CALIBRATED)
s.showUndistorsed = !s.showUndistorsed;
if (s.inputCapture.isOpened() && key == 'g')
{
mode = CAPTURING;
imagePoints.clear();
}
//! [await_input]
}
// -----------------------Show the undistorted image for the image list ------------------------
//! [show_results]
if (s.inputType == Settings::IMAGE_LIST && s.showUndistorsed)
{
Mat view, rview, map1, map2;
initUndistortRectifyMap(cameraMatrix, distCoeffs, Mat(),
getOptimalNewCameraMatrix(cameraMatrix, distCoeffs, imageSize, 1, imageSize, 0),
imageSize, CV_16SC2, map1, map2);
m_mainMap1 = map1;
m_mainMap2 = map2;
for (size_t i = 0; i < s.imageList.size(); i++)
{
view = imread(s.imageList[i], 1);
if (view.empty())
continue;
remap(view, rview, map1, map2, INTER_LINEAR);
imshow("Image View", rview);
char c = (char)waitKey();
if (c == ESC_KEY || c == 'q' || c == 'Q')
break;
}
}
//! [show_results]
// return 0;
}
EMImpl()
{
nclusters = DEFAULT_NCLUSTERS;
covMatType=EM::COV_MAT_DIAGONAL;
termCrit = TermCriteria(TermCriteria::COUNT+TermCriteria::EPS, EM::DEFAULT_MAX_ITERS, 1e-6);
}
int main(int argc, char** argv)
{
ofstream f1;
f1.open("result.txt");
size_t i,j;
Point2f cp;
cv::initModule_nonfree();
vector<Point2f> MP1,MP2;
vector<int> trainIdxs, queryIdxs;
//Read Video File
VideoCapture cap("video1.avi");
if( !cap.isOpened() )
{ cout << "Could not initialize capturing...\n"; return 0;}
VideoWriter writer("ms_tracking.avi",CV_FOURCC('D','I','V','3'),
10,cvSize(640,480),1);
cv::SURF mySURF; mySURF.extended = 0;
Ptr<DescriptorMatcher> descriptorMatcher = DescriptorMatcher::create( "FlannBased" );
int mactherFilterType = getMatcherFilterType( "CrossCheckFilter" );
Mat frame,img1,img2;
cap >> frame;
if( frame.empty() )
return -1;
img1 = frame.clone() ;
Mat temp,temp1;
if(img1.empty())
cout << "Exiting as the input image is empty" << endl;
const char* name = "Initiate_ROI";
box = cvRect(-1,-1,0,0);
cvNamedWindow( name,1);
cvSetMouseCallback( name, my_mouse_callback2);
// Main loop
while( 1 )
{
img1.copyTo(temp);
if( drawing_poly)
{
for ( i=0; i < polyPoints.size(); i++)
circle(temp, polyPoints[i], 2, Scalar(0,255,0), -1,8);
}
cv::imshow(name,temp) ;
char c = (char)waitKey(10);
if( c == '\x1b' ) // esc
break;
if(poly_drawn)
break;
}
//Read the polygon points from a text file
FILE *f11;
polyPoints.clear();
IpolyPoints.clear();
f11 = fopen("points.txt","r");
Point a;
for(int j=0;j<37;j++)
{
fscanf(f11,"%d",&(a.x));
fscanf(f11,"%d",&(a.y));
polyPoints.push_back(a);
IpolyPoints.push_back(a);
}
fclose(f11);
// Drawing Polygon
Point pointArr[polyPoints.size()];
for (i=0; i< polyPoints.size(); i++)
pointArr[i] = polyPoints[i];
const Point* pointsArray[1] = {pointArr};
int nCurvePts[1] = { polyPoints.size() };
polylines(temp, pointsArray, nCurvePts, 1, 1, Scalar(0,255,0), 1);
cout << polyPoints.size() << endl;
box= boundingRect(polyPoints);
//boxOrg = Rect(box.x-15, box.y-15, box.width+30, box.height+30);
boxOuter = Rect(box.x-30, box.y-30, box.width+60, box.height+60);
//box =boxOrg; // storing the initial selected Box, as "box" variable changes in consecutive matching
boxP=box;
Mat img1ROI, labels1, clusters1, descriptors,roidescriptors, descriptors1,bdescriptors, bmdescriptors;
vector<int> reprojections; // number of reprojections per KP, size same as KP(incresing)
vector<Point2f> points,points1,points2, Mpoints1,Mpoints2,bpoints,npoints1,npoints2; //bmpoints,tpoints;
vector<KeyPoint> roikeypoints, bkeypoints,keypoints,keypoints1, keypoints2;
draw_box(temp, box ); //Show InnerBox - This is used by the Mean-Shift Tracker
draw_box(temp,boxOuter); //Show OuterBox - This is used for removing background points
bpoints.clear();
//calculating keypoints and descriptors of the selected polygon in image roi
//==============================================================================================//
for(i=0;i<polyPoints.size();i++)
{
// cout << polyPoints[i] << endl; //
polyPoints[i].x = polyPoints[i].x -boxOuter.x;
polyPoints[i].y = polyPoints[i].y- boxOuter.y;
}
img1ROI = img1(boxOuter);
points1.clear();
mySURF.detect(img1ROI, roikeypoints);
KeyPoint::convert(roikeypoints, points);
mySURF.compute(img1ROI, roikeypoints, roidescriptors);
bdescriptors.release();bkeypoints.clear();
bcategorizePoints( points, bpoints,polyPoints, roikeypoints, roidescriptors, bkeypoints, bdescriptors);
shiftPoints(bpoints,boxOuter);
for(i=0;i<bpoints.size();i++)
circle(temp, bpoints[i], 2, Scalar(0,255,0),2);
vector<KeyPoint> tpkeypoints; Mat tpdescriptors;
categorizePoints( points, points1,polyPoints, roikeypoints, roidescriptors, tpkeypoints, tpdescriptors);
shiftPoints(points1, boxOuter);
for(i=0;i<points1.size();i++)
circle(temp, points1[i], 2, Scalar(0,0,255),2);
//====================================================================================================//
points1.clear();
Mat img2ROI;
// tpkeypoints = keypoints1; tpdescriptors = descriptors1;
cv::imshow(name,temp) ;
imwrite("a.jpg",temp);
cout << "BD_SIZE \t" << bdescriptors.rows << "\t" << "FD_SIZE \t" << tpdescriptors.rows << endl;
// Mat newimg = img1ROI.clone();
// KeyPoint::convert(tpkeypoints, points1);
// for(size_t i=0;i<points1.size();i++)
// circle(newimg, points1[i], 2, Scalar(255,0,255),2);
// imshow( "newimg", newimg );
// points1.clear();
waitKey(0);
cvDestroyWindow( name );
int FG_mp, FG, BG_mp, BG, FG_BG, msI ; //Foreground matching points
struct timeval t1, t2;
for(int l=0;;l++)
{
gettimeofday(&t1, NULL);
cv::kmeans(tpdescriptors, NOC, labels1, TermCriteria( CV_TERMCRIT_ITER + CV_TERMCRIT_EPS, 50, 1.0 ), 1,
KMEANS_RANDOM_CENTERS, clusters1);
cap >> frame;
img2 = frame.clone() ;
temp1 =frame.clone() ;
if(img2.empty() )
{
cout<< "Could not open image: " << endl ;
break;}
int flag=1;
Mpoints1.clear();
Mat descriptors2;
msI=0;
meanShift(img1, img2, descriptorMatcher, mactherFilterType, tpkeypoints, tpdescriptors,keypoints2,descriptors2,
clusters1, cp, flag, MP1,img2ROI,bkeypoints, bdescriptors, temp1,FG_mp, FG, BG_mp, BG, FG_BG,msI);
//==========scaling=================
float scale=1;
// cout <<"MP1size \t" << MP1.size() <<endl;
if(APPLY_SCALING)
{
vector<DMatch> filteredMatches;
if(descriptors1.rows > 4 && descriptors2.rows > 4)
{
crossCheckMatching( descriptorMatcher, descriptors1, descriptors2, filteredMatches, 1 );
trainIdxs.clear(); queryIdxs.clear();
for( i = 0; i < filteredMatches.size(); i++ )
{
queryIdxs.push_back(filteredMatches[i].queryIdx);
trainIdxs.push_back(filteredMatches[i].trainIdx);
}
points1.clear(); points2.clear();
KeyPoint::convert(keypoints1, points1, queryIdxs);
KeyPoint::convert(keypoints2, points2, trainIdxs);
// cout << "point2size" << points2.size() << endl;
//homography
npoints1.clear();npoints2.clear();
Mpoints1.clear();Mpoints2.clear();
Mat H12, points1t;
double ransacReprojThreshold = 10;
if( ransacReprojThreshold >= 0 && points1.size() > 4)
H12 = findHomography( Mat(points1), Mat(points2), CV_RANSAC, ransacReprojThreshold );
vector<char> matchesMask( filteredMatches.size(), 0 );// NONmatchesMask( filteredMatches.size(), 0 );
if( !H12.empty() )
{
perspectiveTransform(Mat(points1), points1t, H12);
double maxInlierDist = 10;//ransacReprojThreshold < 0 ? 3 : ransacReprojThreshold;
for(i = 0; i < points1.size(); i++ )
{
if( norm(points2[i] - points1t.at<Point2f>((int)i,0)) <= 5)// maxInlierDist ) // inlier
{
matchesMask[i] = 1;
npoints2.push_back(points2[i]);
npoints1.push_back(points1[i]);
}
}
for(i=0; i<npoints2.size();i++)
{
for(j=0;j<MP1.size();j++)
{
double dist = norm(npoints2[i]-MP1[j]);
// cout <<"dist \t" <<dist << endl;
// waitKey(0);
if(dist < 0.1)
{
Mpoints2.push_back(npoints2[i]);
Mpoints1.push_back(npoints1[i]);
break;
}
}
}
}
Mat drawImg;
drawMatches( img1ROI, keypoints1, img2ROI, keypoints2, filteredMatches, drawImg, CV_RGB(0, 255, 0), CV_RGB(0, 0, 255), matchesMask
#if DRAW_RICH_KEYPOINTS_MODE
, DrawMatchesFlags::DRAW_RICH_KEYPOINTS
#endif
);
imshow( "correspondance", drawImg );
cout << "npoints1.size \t" << Mpoints1.size() << "\t" << Mpoints2.size() << endl;
if(Mpoints1.size() > 8)
weightScalingAspect(Mpoints1,Mpoints2,&scale);
}
}
img1=img2;
img1ROI = img2ROI;
boxOrg =box;
keypoints1 = keypoints2;
descriptors1 =descriptors2;
box.x += box.width/2;
box.y += box.height/2;
box.height = round(boxOrg.height *scale);
box.width = round(( float(boxOrg.width)/float(boxOrg.height) ) * box.height);
box.x -= box.width/2;
box.y -= box.height/2;
boundaryCheckRect(box);
cout <<"SCALE \t" << scale << endl;
gettimeofday(&t2, NULL);
double diff = (float)((t2.tv_sec * 1000000 + t2.tv_usec) - (t1.tv_sec * 1000000 + t1.tv_usec));
diff = diff/1000;
cout <<"Time taken in mili sec \t" << diff<< endl;
// cout << tpdescriptors.rows << endl;
//cout <<"BD \t" << bdescriptors.rows << endl;
f1 << l << "\t" << FG_mp << "\t" << BG_mp << "\t" << FG << "\t"<< msI << "\n";
cout << "l \t" << l << "\t" <<" msI \t"<< msI << endl;
imshow("img2",temp1);
writer << temp1;
waitKey(0);
// boxOrg = eBox;
char c = (char)waitKey(10);
if( c == '\x1b' ) // esc
{
cout << "Exiting ..." << endl;
break;
}
}
trajectory.close();
return 0;
}
//---------------------------------------------------------
Ptr<StatModel> COpenCV_ML_ANN::Get_Model(void)
{
Ptr<ANN_MLP> Model = ANN_MLP::create();
//-----------------------------------------------------
Mat layer_sizes(1, 2 + Parameters("ANN_LAYERS")->asInt(), CV_32SC1);
layer_sizes.at<int>(0) = Get_Feature_Count(); // The first layer needs the same size (number of neurons) as the number of columns in the training data
for(int i=1; i<layer_sizes.cols-1; i++)
{
layer_sizes.at<int>(i) = Parameters("ANN_NEURONS")->asInt();
}
layer_sizes.at<int>(layer_sizes.cols-1) = Get_Class_Count(); // The last layer needs the same size (number of neurons) as the number of output columns
Model->setLayerSizes(layer_sizes);
//-----------------------------------------------------
switch( Parameters("ANN_ACTIVATION")->asInt() )
{
case 0: // Identity
Model->setActivationFunction(ANN_MLP::IDENTITY);
break;
default: // Sigmoid
Model->setActivationFunction(ANN_MLP::SIGMOID_SYM,
Parameters("ANN_ACT_ALPHA")->asDouble(),
Parameters("ANN_ACT_BETA" )->asDouble()
);
break;
case 2: // Gaussian
Model->setActivationFunction(ANN_MLP::GAUSSIAN,
Parameters("ANN_ACT_ALPHA")->asDouble(),
Parameters("ANN_ACT_BETA" )->asDouble()
);
break;
}
//-----------------------------------------------------
Model->setTermCriteria(TermCriteria(TermCriteria::MAX_ITER + TermCriteria::EPS,
Parameters("ANN_MAXITER")->asInt (),
Parameters("ANN_EPSILON")->asDouble()
));
//-----------------------------------------------------
switch( Parameters("ANN_PROPAGATION")->asInt() )
{
case 0: // resilient propagation
Model->setTrainMethod(ANN_MLP::RPROP);
Model->setRpropDW0 (Parameters("ANN_RP_DW0" )->asDouble());
Model->setRpropDWPlus (Parameters("ANN_RP_DW_PLUS" )->asDouble());
Model->setRpropDWMinus (Parameters("ANN_RP_DW_MINUS")->asDouble());
Model->setRpropDWMin (Parameters("ANN_RP_DW_MIN" )->asDouble());
Model->setRpropDWMax (Parameters("ANN_RP_DW_MAX" )->asDouble());
break;
default:
Model->setTrainMethod(ANN_MLP::BACKPROP);
Model->setBackpropMomentumScale(Parameters("ANN_BP_MOMENT" )->asDouble());
Model->setBackpropWeightScale (Parameters("ANN_BP_DW" )->asDouble());
break;
}
//-----------------------------------------------------
return( Model );
}
TEST_P(ML_ANN_METHOD, Test)
{
int methodType = get<0>(GetParam());
string methodName = get<1>(GetParam());
int N = get<2>(GetParam());
String folder = string(cvtest::TS::ptr()->get_data_path());
String original_path = folder + "waveform.data";
String dataname = folder + "waveform" + '_' + methodName;
Ptr<TrainData> tdata2 = TrainData::loadFromCSV(original_path, 0);
Mat samples = tdata2->getSamples()(Range(0, N), Range::all());
Mat responses(N, 3, CV_32FC1, Scalar(0));
for (int i = 0; i < N; i++)
responses.at<float>(i, static_cast<int>(tdata2->getResponses().at<float>(i, 0))) = 1;
Ptr<TrainData> tdata = TrainData::create(samples, ml::ROW_SAMPLE, responses);
ASSERT_FALSE(tdata.empty()) << "Could not find test data file : " << original_path;
RNG& rng = theRNG();
rng.state = 0;
tdata->setTrainTestSplitRatio(0.8);
Mat testSamples = tdata->getTestSamples();
#ifdef GENERATE_TESTDATA
{
Ptr<ml::ANN_MLP> xx = ml::ANN_MLP_ANNEAL::create();
Mat_<int> layerSizesXX(1, 4);
layerSizesXX(0, 0) = tdata->getNVars();
layerSizesXX(0, 1) = 30;
layerSizesXX(0, 2) = 30;
layerSizesXX(0, 3) = tdata->getResponses().cols;
xx->setLayerSizes(layerSizesXX);
xx->setActivationFunction(ml::ANN_MLP::SIGMOID_SYM);
xx->setTrainMethod(ml::ANN_MLP::RPROP);
xx->setTermCriteria(TermCriteria(TermCriteria::COUNT, 1, 0.01));
xx->train(tdata, ml::ANN_MLP::NO_OUTPUT_SCALE + ml::ANN_MLP::NO_INPUT_SCALE);
FileStorage fs;
fs.open(dataname + "_init_weight.yml.gz", FileStorage::WRITE + FileStorage::BASE64);
xx->write(fs);
fs.release();
}
#endif
{
FileStorage fs;
fs.open(dataname + "_init_weight.yml.gz", FileStorage::READ);
Ptr<ml::ANN_MLP> x = ml::ANN_MLP_ANNEAL::create();
x->read(fs.root());
x->setTrainMethod(methodType);
if (methodType == ml::ANN_MLP::ANNEAL)
{
x->setAnnealEnergyRNG(RNG(CV_BIG_INT(0xffffffff)));
x->setAnnealInitialT(12);
x->setAnnealFinalT(0.15);
x->setAnnealCoolingRatio(0.96);
x->setAnnealItePerStep(11);
}
x->setTermCriteria(TermCriteria(TermCriteria::COUNT, 100, 0.01));
x->train(tdata, ml::ANN_MLP::NO_OUTPUT_SCALE + ml::ANN_MLP::NO_INPUT_SCALE + ml::ANN_MLP::UPDATE_WEIGHTS);
ASSERT_TRUE(x->isTrained()) << "Could not train networks with " << methodName;
string filename = dataname + ".yml.gz";
Mat r_gold;
#ifdef GENERATE_TESTDATA
x->save(filename);
x->predict(testSamples, r_gold);
{
FileStorage fs_response(dataname + "_response.yml.gz", FileStorage::WRITE + FileStorage::BASE64);
fs_response << "response" << r_gold;
}
#else
{
FileStorage fs_response(dataname + "_response.yml.gz", FileStorage::READ);
fs_response["response"] >> r_gold;
}
#endif
ASSERT_FALSE(r_gold.empty());
Ptr<ml::ANN_MLP> y = Algorithm::load<ANN_MLP>(filename);
ASSERT_TRUE(y != NULL) << "Could not load " << filename;
Mat rx, ry;
for (int j = 0; j < 4; j++)
{
rx = x->getWeights(j);
ry = y->getWeights(j);
double n = cvtest::norm(rx, ry, NORM_INF);
EXPECT_LT(n, FLT_EPSILON) << "Weights are not equal for layer: " << j;
}
x->predict(testSamples, rx);
y->predict(testSamples, ry);
double n = cvtest::norm(ry, rx, NORM_INF);
EXPECT_LT(n, FLT_EPSILON) << "Predict are not equal to result of the saved model";
n = cvtest::norm(r_gold, rx, NORM_INF);
EXPECT_LT(n, FLT_EPSILON) << "Predict are not equal to 'gold' response";
}
}
Calib::Calib()
{
Size boardSize(6,5); // Chessboard' size in corners with both color (nb of squares -1)
int widthSquare = 40; // Width of a square in mm
int heightSquare = 27;
vector <Mat> images;
// Getting the four images of the chessboard
string imageFileName = "../src/mire1.jpg";
images.push_back(imread(imageFileName, 1));
imageFileName = "../src/mire2.jpg";
images.push_back(imread(imageFileName, 1));
imageFileName = "../src/mire3.jpg";
images.push_back(imread(imageFileName, 1));
imageFileName = "../src/mire4.jpg";
images.push_back(imread(imageFileName, 1));
Size imageSize = images.at(0).size();
// Find chessboard's corners in the scene for the 4 images
vector<vector<Point2f> > cornersScene(1);
vector<Mat> imagesGray;
imagesGray.resize(4);
for (int i=0; i<4; i++)
{
if(images.at(i).empty())
{
cerr << "Image not read correctly!" << endl;
exit(-1);
}
bool patternFound = findChessboardCorners(images.at(i), boardSize, cornersScene[0]);
if(!patternFound)
{
cerr << "Could not find chess board!" << endl;
exit(-1);
}
// Improve corner's coordinate accuracy
cvtColor(images.at(i), imagesGray.at(i), CV_RGB2GRAY);
cornerSubPix(imagesGray.at(i), cornersScene[0], Size(3,2), Size(-1,-1), TermCriteria(CV_TERMCRIT_EPS+CV_TERMCRIT_ITER, 30, 0.1));
// Drawing the corners
drawChessboardCorners(images.at(i), boardSize, Mat(cornersScene[0]), patternFound );
imshow("Corners find", images.at(i));
int keyPressed;
/*do
{
keyPressed = waitKey(0);
} while (keyPressed != 27);*/
}
// Getting the chessboard's corners on the mire's image
vector<vector<Point3f> > cornersMire(1);
for( int y = 0; y < boardSize.height; y++ )
{
for( int x = 0; x < boardSize.width; x++ )
{
cornersMire[0].push_back(cv::Point3f(float(x*widthSquare),
float(y*heightSquare), 0));
}
}
// Getting the camera's parameters
Mat distortionCoefficients = Mat::zeros(8, 1, CV_64F);
Mat cameraMatrix = Mat::eye(3, 3, CV_64F);
calibrateCamera(cornersMire, cornersScene, imageSize, cameraMatrix,
distortionCoefficients, rotationVectors, translationVectors);
//cout << "Camera matrix: " << cameraMatrix << endl;
//cout << "Distortion _coefficients: " << distortionCoefficients << endl;
cout << rotationVectors.at(0) << endl;
cout << translationVectors.at(0) << endl;
}
OpticalFlow::OpticalFlow() {
data.termcrit = TermCriteria(TermCriteria::COUNT | TermCriteria::EPS, 40, 0.03);
data.subPixWinSize = Size(10, 10);
data.winSize = Size(7, 7);
data.blocked = false;
}
TrackerSamplerPF::TrackerSamplerPF(const Mat& chosenRect,const TrackerSamplerPF::Params ¶meters):
params( parameters ),_function(new TrackingFunctionPF(chosenRect)){
className="PF";
_solver=createPFSolver(_function,parameters.std,TermCriteria(TermCriteria::MAX_ITER,parameters.iterationNum,0.0),
parameters.particlesNum,parameters.alpha);
}
Mat temp2;
Mat temp3;
Mat temp4;
Mat temp5;
};
enum { OPTFLOW_USE_INITIAL_FLOW=4, OPTFLOW_FARNEBACK_GAUSSIAN=256 };
//! computes sparse optical flow using multi-scale Lucas-Kanade algorithm
CV_EXPORTS_W void calcOpticalFlowPyrLK( InputArray prevImg, InputArray nextImg,
InputArray prevPts, CV_OUT InputOutputArray nextPts,
OutputArray status, OutputArray err,
Size winSize=Size(15,15), int maxLevel=3,
TermCriteria criteria=TermCriteria(
TermCriteria::COUNT+TermCriteria::EPS,
30, 0.01),
double derivLambda=0.5,
int flags=0 );
//! computes dense optical flow using Farneback algorithm
CV_EXPORTS_W void calcOpticalFlowFarneback( InputArray prev, InputArray next,
CV_OUT InputOutputArray flow, double pyr_scale, int levels, int winsize,
int iterations, int poly_n, double poly_sigma, int flags );
//! estimates the best-fit Euqcidean, similarity, affine or perspective transformation
// that maps one 2D point set to another or one image to another.
CV_EXPORTS_W Mat estimateRigidTransform( InputArray src, InputArray dst,
bool fullAffine);
}
///////////////////////////////////////////////////////
// Panel::PixelsToLength()
// Description: Not currently used: Calculates the
// ratio of cm to pixels from one checkerboard image
///////////////////////////////////////////////////////
void Panel::PixelsToLength(string sImgPath)
{
cout << "Pixels to Length" << endl << endl;
m_pPanel->m_Image = imread(sImgPath);
Point2f corner1;
Point2f corner2;
Point2f corner3;
Point2f corner4;
bool found = false;
found = findChessboardCorners(m_pPanel->m_Image, Size(9, 6), m_pPanel->corners,
CALIB_CB_ADAPTIVE_THRESH | CALIB_CB_FAST_CHECK | CALIB_CB_NORMALIZE_IMAGE);
Mat imgGray;
cvtColor(m_pPanel->m_Image, imgGray, COLOR_BGR2GRAY);
cornerSubPix(imgGray, m_pPanel->corners, Size(11, 11), Size(-1, -1),
TermCriteria(CV_TERMCRIT_EPS + CV_TERMCRIT_ITER, 30, 0.1));
corner1.x = m_pPanel->corners[45].x;
corner1.y = m_pPanel->corners[45].y;
corner2.x = m_pPanel->corners[0].x;
corner2.y = m_pPanel->corners[0].y;
corner3.x = m_pPanel->corners[8].x;
corner3.y = m_pPanel->corners[8].y;
corner4.x = m_pPanel->corners[53].x;
corner4.y = m_pPanel->corners[53].y;
// Draw rectangle around checkerboard
line(m_pPanel->m_Image, corner1, corner2, CV_RGB(0, 0, 255), 2);
line(m_pPanel->m_Image, corner2, corner3, CV_RGB(0, 0, 255), 2);
line(m_pPanel->m_Image, corner3, corner4, CV_RGB(0, 0, 255), 2);
line(m_pPanel->m_Image, corner4, corner1, CV_RGB(0, 0, 255), 2);
circle(m_pPanel->m_Image, corner1, 10, CV_RGB(0, 0, 255), 2);
circle(m_pPanel->m_Image, corner2, 10, CV_RGB(0, 255, 0), 2);
circle(m_pPanel->m_Image, corner3, 10, CV_RGB(255, 0, 0), 2);
circle(m_pPanel->m_Image, corner4, 10, CV_RGB(100, 100, 100), 2);
double pixel_length = 0;
double pixel_width = 0;
double pixel_width1 = norm(corner1 - corner2);
double pixel_length1 = norm(corner2 - corner3);
double pixel_width2 = norm(corner3 - corner4);
double pixel_length2 = norm(corner4 - corner1);
if (pixel_length1 >= pixel_length2)
pixel_length = pixel_length1;
else
pixel_length = pixel_length2;
if (pixel_width1 >= pixel_width2)
pixel_width = pixel_width1;
else
pixel_width = pixel_width2;
double ratio = (m_pPanel->m_boardLength - 1.0) / (m_pPanel->m_boardWidth - 1.0);
if (pixel_length >= (pixel_width * ratio)){
m_pPanel->m_cmPerPixel = (m_pPanel->m_squareSize * (float)(m_pPanel->m_boardLength - 1)) / pixel_length;
}
else
m_pPanel->m_cmPerPixel = (m_pPanel->m_squareSize * (float)(m_pPanel->m_boardWidth - 1)) / pixel_width;
cout << "cm per pixel : " << m_pPanel->m_cmPerPixel << endl;
// Perspective Transform
// double ratio = 8.0 / 5.0;
// double length = ratio * pixel_width;
//
// vector<Point2f> panel_pts;
// vector<Point2f> rect_pts;
// panel_pts.push_back(corner1);
// panel_pts.push_back(corner2);
// panel_pts.push_back(corner3);
// panel_pts.push_back(corner4);
// rect_pts.push_back(Point2f(0, 0));
// rect_pts.push_back(Point2f((float)width, 0));
// rect_pts.push_back(Point2f((float)width, (float)length));
// rect_pts.push_back(Point2f(0, (float)length));
//
// // Draw new rectangle
// line(m_pPanel->m_Image, rect_pts[0], rect_pts[1], CV_RGB(255, 0, 0), 2);
// line(m_pPanel->m_Image, rect_pts[1], rect_pts[2], CV_RGB(255, 0, 0), 2);
// line(m_pPanel->m_Image, rect_pts[2], rect_pts[3], CV_RGB(255, 0, 0), 2);
// line(m_pPanel->m_Image, rect_pts[3], rect_pts[0], CV_RGB(255, 0, 0), 2);
//
// // Perspective Transorm
// Mat transmtx = getPerspectiveTransform(panel_pts, rect_pts);
// int offsetSize = 500;
// Mat transformed = Mat::zeros(m_pPanel->m_Image.cols + offsetSize, m_pPanel->m_Image.rows + offsetSize, CV_8UC3);
// warpPerspective(m_pPanel->m_Image, transformed, transmtx, transformed.size());
//
//// Mat subImg(transformed, Rect(corner1.x, corner1.y, width, length));
//
// namedWindow("Original", WINDOW_NORMAL);
// imshow("Original", m_pPanel->m_Image);
// namedWindow("Warped", WINDOW_AUTOSIZE);
// imshow("Warped", transformed);
}