void CiaoClass::begin() {
String start;
String stop;
// Wait for U-boot to finish startup
do {
dropAll();
delay(1000);
}while (stream.available() > 0);
stream.println("ciao;r;status"); //check the bridge python status
String status = stream.readStringUntil(END_TX_CHAR);
if(status == "1;running"){
do{ //kill a istance of the bridge.py
stream.println("ciao;w;quit");
stop = stream.readStringUntil(END_TX_CHAR);
delay(3000);
}while(stop != "1;done");
}
do{
stream.print(F("run-ciao\n")); //start bridge python
stream.readStringUntil(END_TX_CHAR);
delay(3000);
stream.println("ciao;r;status"); //check if bridge python is running
start = stream.readStringUntil(END_TX_CHAR);
}while (start != "1;running");
}
bool Element::dropAll( const string& finfo )
{
const Finfo* f = findFinfo( finfo );
if ( f ) {
return dropAll( f->msg() );
}
return 0;
}
void freshTables()
/* Make database have defined but empty tables. */
{
dropAll();
createAll();
}
int main(int argc, char *argv[])
/* Process command line. */
{
boolean drop, move, copy;
struct sigaction sigSpec;
setlinebuf(stdout);
setlinebuf(stderr);
ZeroVar(&sigSpec);
sigSpec.sa_handler = sigStopSignaled;
sigSpec.sa_flags = SA_RESTART;
if (sigaction(SIGUSR1, &sigSpec, NULL) < 0)
errnoAbort("can't set SIGUSR1 handler");
optionInit(&argc, argv, optionSpecs);
drop = optionExists("drop");
move = optionExists("move");
copy = optionExists("copy");
gReload = optionExists("reload");
if (move || copy)
{
if (argc != 3)
usage();
}
else if (argc != 2)
usage();
if ((drop+move+copy) > 1)
errAbort("can only specify one of -drop, -move, or -copy");
gbVerbInit(optionInt("verbose", 0));
if (gbVerbose >= 6)
sqlMonitorEnable(JKSQL_TRACE);
if (drop)
dropAll(argv[1]);
else if (move)
moveAll(argv[1], argv[2]);
else if (copy)
copyAll(argv[1], argv[2]);
else
{
char *reloadList = optionVal("reloadList", NULL);
gDatabase = argv[1];
gOptions = dbLoadOptionsParse(gDatabase);
gForceIgnoreDelete = optionExists("forceIgnoreDelete");
if (optionExists("rebuildDerived"))
gOptions.flags |= DBLOAD_BYPASS_GBLOADED|DBLOAD_REBUILD_DERIVED;
gMaxShrinkage = optionFloat("maxShrinkage", 0.1);
gGbdbGenBank = optionVal("gbdbGenBank", NULL);
if (gGbdbGenBank == NULL)
gGbdbGenBank = gbConfGet(gOptions.conf, "gbdb.genbank");
if (gGbdbGenBank == NULL)
gGbdbGenBank = "/gbdb/genbank";
gWorkDir = optionVal("workdir", "work/load");
if (gOptions.flags & DBLOAD_DRY_RUN)
printf("*** using dry run mode ***\n");
gbLoadRna(reloadList);
}
return 0;
}
