static struct extFile* extFileGet(struct extFileTbl* extFileTbl, char *acc, int extFileId)
/* get the extFile for an accession given it's id. Return NULL if id is not
* valid */
{
struct extFile* extFile = extFileTblFindById(extFileTbl, extFileId);
if (extFile == NULL)
gbVerbMsg(3, "%s: gbExtFile id %d not in gbExtFile table", acc, extFileId);
return extFile;
}
static struct extFile* getExtFile(char *acc, struct extFileTbl* extFileTbl,
HGID seqExtFile)
/* get the extFile by id, reporting if not in table */
{
struct extFile* extFile = extFileTblFindById(extFileTbl, seqExtFile);
/* check if in ext file table */
if (extFile == NULL)
{
/* only reported the first time */
char seqExtStr[32];
safef(seqExtStr, sizeof(seqExtStr), "%d", seqExtFile);
if (!alreadyReported(missingExtFileIds, seqExtStr))
{
gbError("%s: gbSeq.gbExtFile (%d) not in gbExtFile table", acc,
seqExtFile);
flagReported(missingExtFileIds, seqExtStr);
}
}
return extFile;
}
