// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeSyntheticVolume::readFilterParameters(AbstractFilterParametersReader* reader, int index)
{
reader->openFilterGroup(this, index);
setDataContainerName(reader->readString("DataContainerName", getDataContainerName() ) );
setCellAttributeMatrixName(reader->readString("CellAttributeMatrixName", getCellAttributeMatrixName() ) );
setDimensions( reader->readIntVec3("Dimensions", getDimensions() ) );
setResolution( reader->readFloatVec3("Resolution", getResolution() ) );
setOrigin( reader->readFloatVec3("Origin", getOrigin() ) );
setInputStatsArrayPath(reader->readDataArrayPath("InputStatsArrayPath", getInputStatsArrayPath() ) );
setInputPhaseTypesArrayPath(reader->readDataArrayPath("InputPhaseTypesArrayPath", getInputPhaseTypesArrayPath() ) );
setInputStatsFile(reader->readString("InputStatsFile", getInputStatsFile() ) );
setEstimateNumberOfFeatures(reader->readValue("EstimateNumberOfFeatures", getEstimateNumberOfFeatures() ) );
reader->closeFilterGroup();
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void EstablishMatrixPhase::readFilterParameters(AbstractFilterParametersReader* reader, int index)
{
reader->openFilterGroup(this, index);
setOutputCellAttributeMatrixPath( reader->readDataArrayPath("OutputCellAttributeMatrixPath", getOutputCellAttributeMatrixPath() ) );
setOutputCellFeatureAttributeMatrixName( reader->readString("OutputCellFeatureAttributeMatrixName", getOutputCellFeatureAttributeMatrixName() ) );
setOutputCellEnsembleAttributeMatrixName( reader->readString("OutputCellEnsembleAttributeMatrixName", getOutputCellEnsembleAttributeMatrixName() ) );
setFeatureIdsArrayName( reader->readString("FeatureIdsArrayName", getFeatureIdsArrayName() ) );
setCellPhasesArrayName( reader->readString("CellPhasesArrayName", getCellPhasesArrayName() ) );
setUseMask(reader->readValue("UseMask", getUseMask()));
setMaskArrayPath(reader->readDataArrayPath("MaskArrayPath", getMaskArrayPath()));
setFeaturePhasesArrayName(reader->readString("FeaturePhasesArrayName", getFeaturePhasesArrayName()));
setNumFeaturesArrayName( reader->readString("NumFeaturesArrayName", getNumFeaturesArrayName() ) );
setInputStatsArrayPath(reader->readDataArrayPath("InputStatsArrayPath", getInputStatsArrayPath() ) );
setInputPhaseTypesArrayPath(reader->readDataArrayPath("InputPhaseTypesArrayPath", getInputPhaseTypesArrayPath() ) );
reader->closeFilterGroup();
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
QString InitializeSyntheticVolume::estimateNumFeatures(IntVec3_t dims, FloatVec3_t res)
{
float totalvol = 0.0f;
int32_t phase = 0;
totalvol = (dims.x * res.x) * (dims.y * res.y) * (dims.z * res.z);
if (totalvol == 0.0)
{
return "-1";
}
DataContainerArray::Pointer dca = getDataContainerArray();
// Get the PhaseTypes - Remember there is a Dummy PhaseType in the first slot of the array
QVector<size_t> cDims(1, 1); // This states that we are looking for an array with a single component
UInt32ArrayType::Pointer phaseType = dca->getPrereqArrayFromPath<UInt32ArrayType, AbstractFilter>(NULL, getInputPhaseTypesArrayPath(), cDims);
if (phaseType.get() == NULL)
{
QString ss = QObject::tr("Phase types array could not be downcast using std::dynamic_pointer_cast<T> when estimating the number of grains. The path is %1").arg(getInputPhaseTypesArrayPath().serialize());
setErrorCondition(-11002);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
return "0";
}
QVector<size_t> statsDims(1, 1);
StatsDataArray::Pointer statsPtr = dca->getPrereqArrayFromPath<StatsDataArray, AbstractFilter>(this, getInputStatsArrayPath(), statsDims);
if (statsPtr.get() == NULL)
{
QString ss = QObject::tr("Statistics array could not be downcast using std::dynamic_pointer_cast<T> when estimating the number of grains. The path is %1").arg(getInputStatsArrayPath().serialize());
notifyErrorMessage(getHumanLabel(), ss, -11001);
return "0";
}
if (!phaseType->isAllocated())
{
if (getInputStatsFile().isEmpty())
{
QString ss = QObject::tr("Phase types array has not been allocated and the input statistics file is empty");
setErrorCondition(-1000);
notifyWarningMessage(getHumanLabel(), ss, getErrorCondition());
return "-1";
}
QFileInfo fi(getInputStatsFile());
if (fi.exists() == false)
{
QString ss = QObject::tr("Phase types array has not been allocated and the input statistics file does not exist at '%1'").arg(fi.absoluteFilePath());
setErrorCondition(-1001);
notifyWarningMessage(getHumanLabel(), ss, getErrorCondition());
return "-1";
}
hid_t fileId = -1;
herr_t err = 0;
// open the file
fileId = H5Utilities::openFile(getInputStatsFile().toLatin1().constData(), true);
// This will make sure if we return early from this method that the HDF5 File is properly closed.
HDF5ScopedFileSentinel scopedFileSentinel(&fileId, true);
DataArrayPath dap = getInputPhaseTypesArrayPath();
// Generate the path to the AttributeMatrix
QString hPath = DREAM3D::StringConstants::DataContainerGroupName + "/" + dap.getDataContainerName() + "/" + dap.getAttributeMatrixName();
// Open the AttributeMatrix Group
hid_t amGid = H5Gopen(fileId, hPath.toLatin1().data(), H5P_DEFAULT );
scopedFileSentinel.addGroupId(&amGid);
err = phaseType->readH5Data(amGid);
if (err < 0)
{
QString ss = QObject::tr("Error reading phase type data");
setErrorCondition(-1003);
notifyWarningMessage(getHumanLabel(), ss, getErrorCondition());
return "-1";
}
if (!phaseType->isAllocated())
{
QString ss = QObject::tr("Phase types Array was not allocated due to an error reading the data from the statistics file %1").arg(fi.absoluteFilePath());
setErrorCondition(-1002);
notifyWarningMessage(getHumanLabel(), ss, getErrorCondition());
return "-1";
}
}
// Create a Reference Variable so we can use the [] syntax
StatsDataArray& statsDataArray = *(statsPtr.get());
std::vector<int32_t> primaryphases;
std::vector<double> primaryphasefractions;
double totalprimaryfractions = 0.0;
// find which phases are primary phases
for (size_t i = 1; i < phaseType->getNumberOfTuples(); ++i)
{
if (phaseType->getValue(i) == DREAM3D::PhaseType::PrimaryPhase)
{
PrimaryStatsData* pp = PrimaryStatsData::SafePointerDownCast(statsDataArray[i].get());
primaryphases.push_back(i);
primaryphasefractions.push_back(pp->getPhaseFraction());
totalprimaryfractions = totalprimaryfractions + pp->getPhaseFraction();
}
}
// scale the primary phase fractions to total to 1
for (int32_t i = 0; i < primaryphasefractions.size(); i++)
{
primaryphasefractions[i] = primaryphasefractions[i] / totalprimaryfractions;
}
SIMPL_RANDOMNG_NEW()
// generate the Features
int32_t gid = 1;
float currentvol = 0.0f;
float vol = 0.0f;
float diam = 0.0f;
bool volgood = false;
for (int32_t j = 0; j < primaryphases.size(); ++j)
{
float curphasetotalvol = totalvol * primaryphasefractions[j];
while (currentvol < curphasetotalvol)
{
volgood = false;
phase = primaryphases[j];
PrimaryStatsData* pp = PrimaryStatsData::SafePointerDownCast(statsDataArray[phase].get());
if (NULL == pp)
{
QString ss = QObject::tr("Tried to cast a statsDataArray[%1].get() to a PrimaryStatsData* "
"pointer but this resulted in a NULL pointer.\n")
.arg(phase).arg(phase);
setErrorCondition(-666);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
return "-1";
}
while (volgood == false)
{
volgood = true;
if (pp->getFeatureSize_DistType() == DREAM3D::DistributionType::LogNormal)
{
float avgdiam = pp->getFeatureSizeDistribution().at(0)->getValue(0);
float sddiam = pp->getFeatureSizeDistribution().at(1)->getValue(0);
diam = rg.genrand_norm(avgdiam, sddiam);
diam = expf(diam);
if (diam >= pp->getMaxFeatureDiameter()) { volgood = false; }
if (diam < pp->getMinFeatureDiameter()) { volgood = false; }
vol = (4.0f / 3.0f) * (M_PI) * ((diam * 0.5f) * (diam * 0.5f) * (diam * 0.5f));
}
}
currentvol = currentvol + vol;
gid++;
}
}
return QString::number(gid);
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeSyntheticVolume::dataCheck()
{
setErrorCondition(0);
// Create the output Data Container
DataContainer::Pointer m = getDataContainerArray()->createNonPrereqDataContainer<AbstractFilter>(this, getDataContainerName());
if(getErrorCondition() < 0) { return; }
ImageGeom::Pointer image = ImageGeom::CreateGeometry(DREAM3D::Geometry::ImageGeometry);
m->setGeometry(image);
// Sanity Check the Dimensions and Resolution
INIT_SYNTH_VOLUME_CHECK(Dimensions.x, -5000);
INIT_SYNTH_VOLUME_CHECK(Dimensions.y, -5001);
INIT_SYNTH_VOLUME_CHECK(Dimensions.z, -5002);
INIT_SYNTH_VOLUME_CHECK(Resolution.x, -5003);
INIT_SYNTH_VOLUME_CHECK(Resolution.y, -5004);
INIT_SYNTH_VOLUME_CHECK(Resolution.z, -5005);
// Set the Dimensions, Resolution and Origin of the output data container
m->getGeometryAs<ImageGeom>()->setDimensions(m_Dimensions.x, m_Dimensions.y, m_Dimensions.z);
m->getGeometryAs<ImageGeom>()->setResolution(m_Resolution.x, m_Resolution.y, m_Resolution.z);
m->getGeometryAs<ImageGeom>()->setOrigin(m_Origin.x, m_Origin.y, m_Origin.z);
// Create our output Cell and Ensemble Attribute Matrix objects
QVector<size_t> tDims(3, 0);
tDims[0] = m_Dimensions.x;
tDims[1] = m_Dimensions.y;
tDims[2] = m_Dimensions.z;
AttributeMatrix::Pointer cellAttrMat = m->createNonPrereqAttributeMatrix<AbstractFilter>(this, getCellAttributeMatrixName(), tDims, DREAM3D::AttributeMatrixType::Cell);
if(getErrorCondition() < 0 && cellAttrMat.get() == NULL) { return; }
QVector<size_t> cDims(1, 1); // This states that we are looking for an array with a single component
UInt32ArrayType::Pointer phaseType = getDataContainerArray()->getPrereqArrayFromPath<UInt32ArrayType, AbstractFilter>(this, getInputPhaseTypesArrayPath(), cDims);
if(getErrorCondition() < 0 && phaseType.get() == NULL) { return; }
QVector<size_t> statsDims(1, 1);
StatsDataArray::Pointer statsPtr = getDataContainerArray()->getPrereqArrayFromPath<StatsDataArray, AbstractFilter>(this, getInputStatsArrayPath(), statsDims);
if(getErrorCondition() < 0 && statsPtr.get() == NULL) { return; }
if(m_EstimateNumberOfFeatures)
{
m_EstimatedPrimaryFeatures = estimateNumFeatures(m_Dimensions, m_Resolution);
}
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeSyntheticVolume::setupFilterParameters()
{
FilterParameterVector parameters;
QStringList linkedProps("EstimatedPrimaryFeatures");
linkedProps << "InputStatsFile";
parameters.push_back(LinkedBooleanFilterParameter::New("Estimate Number of Features", "EstimateNumberOfFeatures", getEstimateNumberOfFeatures(), linkedProps, FilterParameter::Parameter));
parameters.push_back(InputFileFilterParameter::New("Input Statistics File", "InputStatsFile", getInputStatsFile(), FilterParameter::Parameter, "*.dream3d"));
PreflightUpdatedValueFilterParameter::Pointer param = PreflightUpdatedValueFilterParameter::New("Estimated Primary Features", "EstimatedPrimaryFeatures", getEstimatedPrimaryFeatures(), FilterParameter::Parameter);
param->setReadOnly(true);
parameters.push_back(param);
parameters.push_back(SeparatorFilterParameter::New("Cell Ensemble Data", FilterParameter::RequiredArray));
{
DataArraySelectionFilterParameter::RequirementType req = DataArraySelectionFilterParameter::CreateRequirement(DREAM3D::TypeNames::StatsDataArray, 1, DREAM3D::AttributeMatrixType::CellEnsemble, DREAM3D::Defaults::AnyGeometry);
QVector<uint32_t> geomTypes;
geomTypes.push_back(DREAM3D::GeometryType::ImageGeometry);
geomTypes.push_back(DREAM3D::GeometryType::UnknownGeometry);
req.dcGeometryTypes = geomTypes;
parameters.push_back(DataArraySelectionFilterParameter::New("Statistics", "InputStatsArrayPath", getInputStatsArrayPath(), FilterParameter::RequiredArray, req));
}
{
DataArraySelectionFilterParameter::RequirementType req = DataArraySelectionFilterParameter::CreateRequirement(DREAM3D::TypeNames::UInt32, 1, DREAM3D::AttributeMatrixType::CellEnsemble, DREAM3D::Defaults::AnyGeometry);
QVector<uint32_t> geomTypes;
geomTypes.push_back(DREAM3D::GeometryType::ImageGeometry);
geomTypes.push_back(DREAM3D::GeometryType::UnknownGeometry);
req.dcGeometryTypes = geomTypes;
parameters.push_back(DataArraySelectionFilterParameter::New("Phase Types", "InputPhaseTypesArrayPath", getInputPhaseTypesArrayPath(), FilterParameter::RequiredArray, req));
}
parameters.push_back(StringFilterParameter::New("Synthetic Volume Data Container", "DataContainerName", getDataContainerName(), FilterParameter::CreatedArray));
parameters.push_back(SeparatorFilterParameter::New("Cell Data", FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Cell Attribute Matrix", "CellAttributeMatrixName", getCellAttributeMatrixName(), FilterParameter::CreatedArray));
parameters.push_back(IntVec3FilterParameter::New("Dimensions", "Dimensions", getDimensions(), FilterParameter::Parameter));
parameters.push_back(FloatVec3FilterParameter::New("Resolution", "Resolution", getResolution(), FilterParameter::Parameter));
parameters.push_back(FloatVec3FilterParameter::New("Origin", "Origin", getOrigin(), FilterParameter::Parameter));
setFilterParameters(parameters);
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void EstablishMatrixPhase::dataCheck()
{
setErrorCondition(0);
DataArrayPath tempPath;
getDataContainerArray()->getPrereqGeometryFromDataContainer<ImageGeom, AbstractFilter>(this, getOutputCellAttributeMatrixPath().getDataContainerName());
QVector<size_t> cDims(1, 1);
m_PhaseTypesPtr = getDataContainerArray()->getPrereqArrayFromPath<DataArray<uint32_t>, AbstractFilter>(this, getInputPhaseTypesArrayPath(), cDims);
if( NULL != m_PhaseTypesPtr.lock().get() ) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_PhaseTypes = m_PhaseTypesPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
m_StatsDataArray = getDataContainerArray()->getPrereqArrayFromPath<StatsDataArray, AbstractFilter>(this, getInputStatsArrayPath(), cDims);
if(m_StatsDataArray.lock() == NULL)
{
QString ss = QObject::tr("Statistics array is not initialized correctly. The path is %1").arg(getInputStatsArrayPath().serialize());
setErrorCondition(-308);
notifyErrorMessage(getHumanLabel(), ss, -308);
}
cDims[0] = 1;
// Cell Data
tempPath.update(getOutputCellAttributeMatrixPath().getDataContainerName(), getOutputCellAttributeMatrixPath().getAttributeMatrixName(), getFeatureIdsArrayName() );
m_FeatureIdsPtr = getDataContainerArray()->createNonPrereqArrayFromPath<DataArray<int32_t>, AbstractFilter, int32_t>(this, tempPath, -1, cDims); /* Assigns the shared_ptr<>(this, tempPath, -1, dims); Assigns the shared_ptr<> to an instance variable that is a weak_ptr<> */
if( NULL != m_FeatureIdsPtr.lock().get() ) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_FeatureIds = m_FeatureIdsPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
tempPath.update(getOutputCellAttributeMatrixPath().getDataContainerName(), getOutputCellAttributeMatrixPath().getAttributeMatrixName(), getCellPhasesArrayName() );
m_CellPhasesPtr = getDataContainerArray()->createNonPrereqArrayFromPath<DataArray<int32_t>, AbstractFilter, int32_t>(this, tempPath, 0, cDims); /* Assigns the shared_ptr<>(this, tempPath, 0, dims); Assigns the shared_ptr<> to an instance variable that is a weak_ptr<> */
if( NULL != m_CellPhasesPtr.lock().get() ) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_CellPhases = m_CellPhasesPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
if (m_UseMask == true)
{
m_MaskPtr = getDataContainerArray()->getPrereqArrayFromPath<DataArray<bool>, AbstractFilter>(this, getMaskArrayPath(), cDims);
if (NULL != m_MaskPtr.lock().get()) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_Mask = m_MaskPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
}
if(getErrorCondition() < 0) { return; }
DataContainer::Pointer m = getDataContainerArray()->getDataContainer(getOutputCellAttributeMatrixPath().getDataContainerName());
QVector<size_t> tDims(1, 0);
AttributeMatrix::Pointer cellFeatureAttrMat = m->createNonPrereqAttributeMatrix<AbstractFilter>(this, getOutputCellFeatureAttributeMatrixName(), tDims, DREAM3D::AttributeMatrixType::CellFeature);
if(getErrorCondition() < 0 || NULL == cellFeatureAttrMat.get()) { return; }
tDims[0] = m_PhaseTypesPtr.lock()->getNumberOfTuples();
AttributeMatrix::Pointer cellEnsembleAttrMat = m->createNonPrereqAttributeMatrix<AbstractFilter>(this, getOutputCellEnsembleAttributeMatrixName(), tDims, DREAM3D::AttributeMatrixType::CellEnsemble);
if(getErrorCondition() < 0 || NULL == cellEnsembleAttrMat.get()) { return; }
// Feature Data
tempPath.update(getOutputCellAttributeMatrixPath().getDataContainerName(), getOutputCellFeatureAttributeMatrixName(), getFeaturePhasesArrayName() );
m_FeaturePhasesPtr = getDataContainerArray()->createNonPrereqArrayFromPath<DataArray<int32_t>, AbstractFilter, int32_t>(this, tempPath, 0, cDims); /* Assigns the shared_ptr<> to an instance variable that is a weak_ptr<> */
if( NULL != m_FeaturePhasesPtr.lock().get() ) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_FeaturePhases = m_FeaturePhasesPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
// Ensemble Data
tempPath.update(getOutputCellAttributeMatrixPath().getDataContainerName(), getOutputCellEnsembleAttributeMatrixName(), getNumFeaturesArrayName() );
m_NumFeaturesPtr = getDataContainerArray()->createNonPrereqArrayFromPath<DataArray<int32_t>, AbstractFilter, int32_t>(this, tempPath, 0, cDims); /* Assigns the shared_ptr<> to an instance variable that is a weak_ptr<> */
if( NULL != m_NumFeaturesPtr.lock().get() ) /* Validate the Weak Pointer wraps a non-NULL pointer to a DataArray<T> object */
{ m_NumFeatures = m_NumFeaturesPtr.lock()->getPointer(0); } /* Now assign the raw pointer to data from the DataArray<T> object */
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void EstablishMatrixPhase::setupFilterParameters()
{
FilterParameterVector parameters;
QStringList linkedProps("MaskArrayPath");
parameters.push_back(LinkedBooleanFilterParameter::New("Use Mask", "UseMask", getUseMask(), linkedProps, FilterParameter::Parameter));
parameters.push_back(SeparatorFilterParameter::New("Cell Data", FilterParameter::RequiredArray));
{
AttributeMatrixSelectionFilterParameter::RequirementType req = AttributeMatrixSelectionFilterParameter::CreateRequirement(DREAM3D::AttributeMatrixType::Cell, DREAM3D::GeometryType::ImageGeometry);
parameters.push_back(AttributeMatrixSelectionFilterParameter::New("Cell Attribute Matrix", "OutputCellAttributeMatrixPath", getOutputCellAttributeMatrixPath(), FilterParameter::RequiredArray, req));
}
parameters.push_back(SeparatorFilterParameter::New("Cell Data", FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Feature Ids", "FeatureIdsArrayName", getFeatureIdsArrayName(), FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Phases", "CellPhasesArrayName", getCellPhasesArrayName(), FilterParameter::CreatedArray));
{
DataArraySelectionFilterParameter::RequirementType req = DataArraySelectionFilterParameter::CreateCategoryRequirement(DREAM3D::TypeNames::Bool, 1, DREAM3D::AttributeMatrixObjectType::Element);
parameters.push_back(DataArraySelectionFilterParameter::New("Mask", "MaskArrayPath", getMaskArrayPath(), FilterParameter::RequiredArray, req));
}
parameters.push_back(SeparatorFilterParameter::New("Cell Feature Data", FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Cell Feature Attribute Matrix", "OutputCellFeatureAttributeMatrixName", getOutputCellFeatureAttributeMatrixName(), FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Phases", "FeaturePhasesArrayName", getFeaturePhasesArrayName(), FilterParameter::CreatedArray));
parameters.push_back(SeparatorFilterParameter::New("Cell Ensemble Data", FilterParameter::RequiredArray));
{
DataArraySelectionFilterParameter::RequirementType req = DataArraySelectionFilterParameter::CreateRequirement(DREAM3D::TypeNames::StatsDataArray, 1, DREAM3D::AttributeMatrixType::CellEnsemble, DREAM3D::Defaults::AnyGeometry);
QVector<uint32_t> geomTypes;
geomTypes.push_back(DREAM3D::GeometryType::ImageGeometry);
geomTypes.push_back(DREAM3D::GeometryType::UnknownGeometry);
req.dcGeometryTypes = geomTypes;
parameters.push_back(DataArraySelectionFilterParameter::New("Statistics", "InputStatsArrayPath", getInputStatsArrayPath(), FilterParameter::RequiredArray, req));
}
{
DataArraySelectionFilterParameter::RequirementType req = DataArraySelectionFilterParameter::CreateRequirement(DREAM3D::TypeNames::UInt32, 1, DREAM3D::AttributeMatrixType::CellEnsemble, DREAM3D::Defaults::AnyGeometry);
QVector<uint32_t> geomTypes;
geomTypes.push_back(DREAM3D::GeometryType::ImageGeometry);
geomTypes.push_back(DREAM3D::GeometryType::UnknownGeometry);
req.dcGeometryTypes = geomTypes;
parameters.push_back(DataArraySelectionFilterParameter::New("Phase Types", "InputPhaseTypesArrayPath", getInputPhaseTypesArrayPath(), FilterParameter::RequiredArray, req));
}
parameters.push_back(SeparatorFilterParameter::New("Cell Ensemble Data", FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Cell Ensemble Attribute Matrix", "OutputCellEnsembleAttributeMatrixName", getOutputCellEnsembleAttributeMatrixName(), FilterParameter::CreatedArray));
parameters.push_back(StringFilterParameter::New("Number of Features", "NumFeaturesArrayName", getNumFeaturesArrayName(), FilterParameter::CreatedArray));
setFilterParameters(parameters);
}
