int gt_block_unit_test(GtError *err)
{
GtRange r1, r2, r_temp, b_range;
GtStrand s;
GtGenomeNode *gn1, *gn2;
GtElement *e1, *e2;
double height;
GtBlock *b;
GtStr *seqid, *caption1, *caption2;
int had_err = 0;
GtStyle *sty;
GtError *testerr;
gt_error_check(err);
seqid = gt_str_new_cstr("seqid");
caption1 = gt_str_new_cstr("foo");
caption2 = gt_str_new_cstr("bar");
testerr = gt_error_new();
r1.start = 10UL;
r1.end = 50UL;
r2.start = 40UL;
r2.end = 50UL;
gn1 = gt_feature_node_new(seqid, gt_ft_gene, r1.start, r1.end,
GT_STRAND_FORWARD);
gn2 = gt_feature_node_new(seqid, gt_ft_exon, r2.start, r2.end,
GT_STRAND_FORWARD);
e1 = gt_element_new((GtFeatureNode*) gn1);
e2 = gt_element_new((GtFeatureNode*) gn2);
b = gt_block_new();
/* test gt_block_insert_elements */
gt_ensure((0UL == gt_block_get_size(b)));
gt_block_insert_element(b, (GtFeatureNode*) gn1);
gt_ensure((1UL == gt_block_get_size(b)));
gt_block_insert_element(b, (GtFeatureNode*) gn2);
gt_ensure((2UL == gt_block_get_size(b)));
/* test gt_block_set_range & gt_block_get_range */
r_temp = gt_range_join(&r1, &r2);
gt_block_set_range(b, r_temp);
b_range = gt_block_get_range(b);
gt_ensure((0 == gt_range_compare(&b_range, &r_temp)));
gt_ensure((1 == gt_range_compare(&r2, &r_temp)));
/* tests gt_block_set_caption & gt_block_get_caption */
gt_block_set_caption(b, caption1);
gt_ensure((0 == gt_str_cmp(gt_block_get_caption(b), caption1)));
gt_ensure((0 != gt_str_cmp(gt_block_get_caption(b), caption2)));
/* tests gt_block_set_strand & gt_block_get_range */
s = gt_block_get_strand(b);
gt_ensure((GT_STRAND_UNKNOWN == s));
gt_block_set_strand(b, GT_STRAND_FORWARD);
s = gt_block_get_strand(b);
gt_ensure((GT_STRAND_FORWARD == s));
/* test gt_block_get_max_height() */
sty = gt_style_new(err);
gt_ensure(gt_block_get_max_height(b, &height, sty, err) == 0);
gt_ensure(!gt_error_is_set(testerr));
gt_ensure(height == BAR_HEIGHT_DEFAULT);
gt_style_set_num(sty, "exon", "bar_height", 42);
gt_ensure(gt_block_get_max_height(b, &height, sty, err) == 0);
gt_ensure(!gt_error_is_set(testerr));
gt_ensure(height == 42);
gt_style_set_num(sty, "gene", "bar_height", 23);
gt_ensure(gt_block_get_max_height(b, &height, sty, err) == 0);
gt_ensure(!gt_error_is_set(testerr));
gt_ensure(height == 42);
gt_style_unset(sty, "exon", "bar_height");
gt_ensure(gt_block_get_max_height(b, &height, sty, err) == 0);
gt_ensure(!gt_error_is_set(testerr));
gt_ensure(height == 23);
gt_str_delete(caption2);
gt_str_delete(seqid);
gt_element_delete(e1);
gt_element_delete(e2);
gt_block_delete(b);
gt_style_delete(sty);
gt_error_delete(testerr);
gt_genome_node_delete(gn1);
gt_genome_node_delete(gn2);
return had_err;
}
int gt_canvas_cairo_visit_block(GtCanvas *canvas, GtBlock *block,
GtError *err)
{
int had_err = 0, arrow_status = ARROW_NONE;
GtRange block_range;
GtDrawingRange draw_range;
GtColor grey, fillcolor, strokecolor;
double block_start,
block_width,
bar_height = BAR_HEIGHT_DEFAULT,
min_len_block = MIN_LEN_BLOCK_DEFAULT,
arrow_width = ARROW_WIDTH_DEFAULT,
stroke_width = STROKE_WIDTH_DEFAULT;
const char *caption, *btype;
GtStrand strand;
double maxbarheight;
btype = gt_block_get_type(block);
gt_assert(canvas && block);
grey.red = grey.green = grey.blue = DEFAULT_GREY_TONE;
grey.alpha = 0.5;
strand = gt_block_get_strand(block);
block_range = gt_block_get_range(block);
if (gt_block_get_max_height(block, &maxbarheight, canvas->pvt->sty, err)) {
return -1;
}
if (gt_style_get_num(canvas->pvt->sty, "format", "bar_height", &bar_height,
NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (gt_style_get_num(canvas->pvt->sty, "format", "min_len_block",
&min_len_block,NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (gt_style_get_num(canvas->pvt->sty, "format", "arrow_width", &arrow_width,
NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (gt_style_get_num(canvas->pvt->sty, "format", "stroke_width",
&stroke_width, NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (gt_style_get_color_with_track(canvas->pvt->sty,
btype, "stroke", &strokecolor,
gt_block_get_top_level_feature(block),
gt_track_get_title(canvas->pvt->current_track),
err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (strand == GT_STRAND_REVERSE || strand == GT_STRAND_BOTH)
arrow_status = ARROW_LEFT;
if (strand == GT_STRAND_FORWARD || strand == GT_STRAND_BOTH)
arrow_status = (arrow_status == ARROW_LEFT ? ARROW_BOTH : ARROW_RIGHT);
/* calculate scaled drawing coordinates for this canvas */
draw_range = gt_coords_calc_generic_range(block_range,
canvas->pvt->viewrange);
draw_range.start *= canvas->pvt->width-2*canvas->pvt->margins;
draw_range.end *= canvas->pvt->width-2*canvas->pvt->margins;
block_start = draw_range.start + canvas->pvt->margins;
block_width = draw_range.end - draw_range.start;
/* draw block caption */
if (gt_block_caption_is_visible(block))
{
caption = gt_str_get(gt_block_get_caption(block));
if (caption)
{
double theight = gt_graphics_get_text_height(canvas->pvt->g),
captionspace = CAPTION_BAR_SPACE_DEFAULT;
if (gt_style_get_num(canvas->pvt->sty,
"format", "block_caption_space",
&captionspace, NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
if (gt_style_get_num(canvas->pvt->sty,
"format", "block_caption_font_size",
&theight, NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
gt_graphics_set_font(canvas->pvt->g,
"Sans",
SLANT_NORMAL,
WEIGHT_NORMAL,
theight);
gt_graphics_draw_text_clip(canvas->pvt->g,
block_start,
canvas->pvt->y - bar_height/2
- captionspace,
caption);
}
}
/* do not draw further details in very small blocks */
if (!gt_block_has_only_one_fullsize_element(block)
&& gt_double_smaller_double(block_width, min_len_block))
{
/* optimise drawing for very narrow blocks,
if <= 1px/pt width, draw as simple lines */
if (canvas->pvt->bt && draw_range.end-draw_range.start <= 1.1)
{
if (!gt_bittab_bit_is_set(canvas->pvt->bt,
(unsigned long) draw_range.start)) {
gt_graphics_draw_vertical_line(canvas->pvt->g,
block_start,
canvas->pvt->y - bar_height/2,
strokecolor,
bar_height,
stroke_width);
gt_bittab_set_bit(canvas->pvt->bt, (unsigned long) draw_range.start);
}
} else {
if (gt_style_get_color_with_track(canvas->pvt->sty,
btype, "fill",
&fillcolor,
gt_block_get_top_level_feature(block),
gt_track_get_title(canvas->pvt->current_track),
err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
gt_graphics_draw_box(canvas->pvt->g,
block_start,
canvas->pvt->y - bar_height/2,
block_width,
bar_height,
fillcolor,
arrow_status,
arrow_width,
stroke_width,
strokecolor,
true);
/* draw arrowheads at clipped margins */
if (draw_range.clip == CLIPPED_LEFT || draw_range.clip == CLIPPED_BOTH)
gt_graphics_draw_arrowhead(canvas->pvt->g,
canvas->pvt->margins - 10,
canvas->pvt->y - 4,
grey,
ARROW_LEFT);
if (draw_range.clip == CLIPPED_RIGHT || draw_range.clip == CLIPPED_BOTH)
gt_graphics_draw_arrowhead(canvas->pvt->g,
canvas->pvt->width-canvas->pvt->margins
+ 10,
canvas->pvt->y - 4,
grey,
ARROW_RIGHT);
}
/* register coordinates in GtImageInfo object if available */
if (canvas->pvt->ii)
{
GtRecMap *rm = gt_rec_map_new(block_start,
canvas->pvt->y - bar_height/2,
block_start + block_width,
canvas->pvt->y + bar_height/2,
(GtFeatureNode*) /* XXX */
gt_block_get_top_level_feature(block));
gt_image_info_add_rec_map(canvas->pvt->ii, rm);
gt_rec_map_set_omitted_children(rm, true);
}
/* signal break */
return 1;
}
/* get stroke color */
if (gt_style_get_color(canvas->pvt->sty,
"format", "default_stroke_color",
&strokecolor, NULL, err) == GT_STYLE_QUERY_ERROR) {
return -1;
}
/* draw parent block boundaries */
gt_graphics_draw_dashes(canvas->pvt->g,
block_start,
canvas->pvt->y - bar_height/2,
block_width,
bar_height,
ARROW_NONE,
arrow_width,
stroke_width,
strokecolor);
return had_err;
}
