MBOOL
JpegCodec::
checkIfNeedImgTransform(
ImgBufInfo const rSrcBufInfo,
ImgBufInfo const rDstBufInfo,
Rect const rROI,
MUINT32 const u4Rotation,
MUINT32 const u4Flip
)
{
FUNCTION_LOG_START;
// format
// resize
if (rDstBufInfo.u4ImgWidth != rSrcBufInfo.u4ImgWidth ||
rDstBufInfo.u4ImgHeight != rSrcBufInfo.u4ImgHeight)
{
MY_LOGD("Resize src =(%d,%d), dst=(%d,%d)",
rSrcBufInfo.u4ImgWidth, rSrcBufInfo.u4ImgHeight,
rDstBufInfo.u4ImgWidth, rDstBufInfo.u4ImgHeight);
return MTRUE;
}
// check dest image width/height if align to 16x
if ((rDstBufInfo.u4ImgWidth & 0xf != 0) ||
(rDstBufInfo.u4ImgHeight & 0xf != 0))
{
MY_LOGD("Dest width/height not aligh to 16x, dst =(%d, %d)",
rDstBufInfo.u4ImgWidth, rDstBufInfo.u4ImgHeight);
return MTRUE;
}
// roi
if (rROI.x != 0 || rROI.y != 0
|| rROI.w != rSrcBufInfo.u4ImgWidth
|| rROI.h != rSrcBufInfo.u4ImgHeight)
{
MY_LOGD("Crop , roi = (%d, %d, %d, %d)", rROI.x, rROI.y,
rROI.w, rROI.h);
return MTRUE;
}
// rotation
if (0 != u4Rotation)
{
MY_LOGD("rotation: %d", u4Rotation);
return MTRUE;
}
// flip
if (0 != u4Flip)
{
MY_LOGD("flip:%d", u4Flip);
return MTRUE;
}
// JPEG format but source format not support
if (!isSupportedFormat(rSrcBufInfo.eImgFmt))
{
MY_LOGD("Not JPEG codec support fmt:0x%x", rSrcBufInfo.eImgFmt);
return MTRUE;
}
//
MY_LOGD("No need to do image transform");
FUNCTION_LOG_END;
return MFALSE;
}
void edwParseSubmitFile(struct sqlConnection *conn, char *submitLocalPath, char *submitUrl,
struct submitFileRow **retSubmitList)
/* Load and parse up this file as fielded table, make sure all required fields are there,
* and calculate indexes of required fields. This produces an edwFile list, but with
* still quite a few fields missing - just what can be filled in from submit filled in.
* The submitUrl is just used for error reporting. If it's local, just make it the
* same as submitLocalPath. */
{
char *requiredFields[] = {"file_name", "format", "output_type", "experiment", "replicate",
"enriched_in", "md5_sum", "size", "modified", "valid_key"};
struct fieldedTable *table = fieldedTableFromTabFile(submitLocalPath, submitUrl,
requiredFields, ArraySize(requiredFields));
/* Get offsets of all required fields */
int fileIx = stringArrayIx("file_name", table->fields, table->fieldCount);
int formatIx = stringArrayIx("format", table->fields, table->fieldCount);
int outputIx = stringArrayIx("output_type", table->fields, table->fieldCount);
int experimentIx = stringArrayIx("experiment", table->fields, table->fieldCount);
int replicateIx = stringArrayIx("replicate", table->fields, table->fieldCount);
int enrichedIx = stringArrayIx("enriched_in", table->fields, table->fieldCount);
int md5Ix = stringArrayIx("md5_sum", table->fields, table->fieldCount);
int sizeIx = stringArrayIx("size", table->fields, table->fieldCount);
int modifiedIx = stringArrayIx("modified", table->fields, table->fieldCount);
int validIx = stringArrayIx("valid_key", table->fields, table->fieldCount);
/* See if we're doing replacement and check have all columns needed if so. */
int replacesIx = stringArrayIx(replacesTag, table->fields, table->fieldCount);
int replaceReasonIx = stringArrayIx(replaceReasonTag, table->fields, table->fieldCount);
boolean doReplace = (replacesIx != -1);
if (doReplace)
if (replaceReasonIx == -1)
errAbort("Error: got \"%s\" column without \"%s\" column in %s.",
replacesTag, replaceReasonTag, submitUrl);
/* Loop through and make sure all field values are ok */
struct fieldedRow *fr;
for (fr = table->rowList; fr != NULL; fr = fr->next)
{
char **row = fr->row;
char *fileName = row[fileIx];
allGoodFileNameChars(fileName);
char *format = row[formatIx];
if (!isSupportedFormat(format))
errAbort("Format %s is not supported", format);
allGoodSymbolChars(row[outputIx]);
char *experiment = row[experimentIx];
if (!isExperimentId(experiment))
errAbort("%s in experiment field does not seem to be an encode experiment", experiment);
char *replicate = row[replicateIx];
if (differentString(replicate, "pooled") && differentString(replicate, "n/a") )
if (!isAllNum(replicate))
errAbort("%s is not a good value for the replicate column", replicate);
char *enriched = row[enrichedIx];
if (!encode3CheckEnrichedIn(enriched))
errAbort("Enriched_in %s is not supported", enriched);
char *md5 = row[md5Ix];
if (strlen(md5) != 32 || !isAllHexLower(md5))
errAbort("md5 '%s' is not in all lower case 32 character hexadecimal format.", md5);
char *size = row[sizeIx];
if (!isAllNum(size))
errAbort("Invalid size '%s'", size);
char *modified = row[modifiedIx];
if (!isAllNum(modified))
errAbort("Invalid modification time '%s'", modified);
char *validIn = row[validIx];
char *realValid = encode3CalcValidationKey(md5, sqlLongLong(size));
if (!sameString(validIn, realValid))
errAbort("The valid_key %s for %s doesn't fit", validIn, fileName);
freez(&realValid);
if (doReplace)
{
char *replaces = row[replacesIx];
char *reason = row[replaceReasonIx];
if (!isEmptyOrNa(replaces))
{
char *prefix = edwLicensePlateHead(conn);
if (!startsWith(prefix, replaces))
errAbort("%s in replaces column is not an ENCODE file accession", replaces);
if (isEmptyOrNa(reason))
errAbort("Replacing %s without a reason\n", replaces);
}
}
}
*retSubmitList = submitFileRowFromFieldedTable(conn, table,
fileIx, md5Ix, sizeIx, modifiedIx, replacesIx, replaceReasonIx);
}
