static puint_t get_free_frame() {
if (frame_pool == NULL) {
return ((puint_t)malign(0x1000, 0x1000)-0xFFFFFFFF80000000);
} else {
section_info_t* section = (section_info_t*)physical_to_virtual((puint_t)frame_pool);
while (section != NULL) {
if (section->head != NULL) {
stack_element_t* se = (stack_element_t*) physical_to_virtual((puint_t)section->head);
section->head = se->next;
((frame_info_t*)physical_to_virtual((puint_t)section->frame_array))
[se->array_ord].usage_count = 1;
return se->frame_address;
}
section = (section_info_t*)physical_to_virtual((puint_t)section->next_section);
}
proc_spinlock_unlock(&__frame_lock);
return 0;
}
}
void align_from_tree(ALNPTR mult_aln,OPT opt,Boolean usemenu,Boolean from_complete_align,Boolean verbose,ALNCOUNT *alncount)
{
char path[FILENAMELEN+1],temp[MAXLINE+1];
sint i,count,nanchors;
if(mult_aln->nseqs<=0) {
error("No sequences in memory. Load sequences first.");
return;
}
if (mult_aln->nseqs == 1) {
error("Less than 2 sequences in memory. Load sequences first.");
return;
}
count = malign(mult_aln,*opt.mult_opt,opt.alnout_opt->output_order,verbose,alncount);
if (count <= 0) return;
if (usemenu) fprintf(stdout,"\n\n\n");
mult_aln->treename[0]=EOS;
}
