Ejemplo n.º 1
0
struct variant *variantFromPgSnpAnnoRow(struct annoRow *row, char *refAllele, struct lm *lm)
/* Translate pgSnp annoRow into variant (allocated by lm). */
{
struct pgSnp pgSnp;
pgSnpStaticLoad(row->data, &pgSnp);
return variantNew(pgSnp.chrom, pgSnp.chromStart, pgSnp.chromEnd, pgSnp.alleleCount,
		  pgSnp.name, refAllele, lm);
}
Ejemplo n.º 2
0
static struct variant *variantFromPgSnpRow(struct annoGratorGpVar *self, struct annoRow *row,
					   char *refAllele)
/* Translate pgSnp array of words into variant. */
{
struct pgSnp pgSnp;
pgSnpStaticLoad(row->data, &pgSnp);
struct variant *var = variantFromPgSnp(&pgSnp, refAllele, self->lm);
return var;
}