void test_unpack_seq(test_harness& t) {
t.check(unpack_seq("", 0), "", "unpack_seq.empty");
t.check(unpack_seq("\x10", 1), "A", "unpack_seq.A");
t.check(unpack_seq("\x20", 1), "C", "unpack_seq.C");
t.check(unpack_seq("\x40", 1), "G", "unpack_seq.G");
t.check(unpack_seq("\x80", 1), "T", "unpack_seq.T");
t.check(unpack_seq("\x18", 2), "AT", "unpack_seq.AT");
t.check(unpack_seq("\x84", 2), "TG", "unpack_seq.TG");
t.check(unpack_seq("\x42", 2), "GC", "unpack_seq.GC");
t.check(unpack_seq("\x41\x88\x12\x10", 7), "GATTACA", "unpack_seq.GATTACA");
test_packing(t, "", "");
test_packing(t, "AACGTCCTGCAGGATTA", "\x11\x24\x82\x28\x42\x14\x41\x88\x10");
test_packing(t, "acmgrsvtwyhkdb.", "\x12\x34\x56\x78\x9a\xbc\xde\xf0",
"ACMGRSVTWYHKDBN");
bool threw = false;
try {
char buffer[10];
sam::alignment::pack_seq(buffer, "ATZ", 3);
}
catch (...) {
threw = true;
}
t.check(threw, "pack_seq.invalid_char");
}
void main()
{
int result;
result = test_packing();
if (result == 0)
printf("test_packing PASSED!\n");
else
printf("test_packing FAILED!\n");
}
