void MolBrowser::update() {
MoleculeList *mlist = app->moleculeList;
int nummols = mlist->num();
char buf[256], molnamebuf[81];
int need_full_regen = 0;
#if 1
// If the browser is larger than needed, we have to
// re-create it from scratch since some molecule was
// potentially deleted from the middle.
// If the size remains fixed, then we need to regenerate
// because we are getting called to rename an existing molecule...
if (size() > nummols || size() == nummols) {
need_full_regen = 1;
}
#else
need_full_regen = 1;
#endif
if (need_full_regen) {
clear();
for (int i=0; i<nummols; i++) {
Molecule *mol = mlist->molecule(i);
// prevent string length overflows
strncpy(molnamebuf, mol->molname(), sizeof(molnamebuf)-1);
// display state of active/displayed/fixed by toggling the text color
sprintf(buf, "%d\t%s\t%s\t%s\t%s\t%-13s\t%-9d\t%-7d\t%-3d",
mol->id(),
mlist->is_top(i) ? "T" : " ",
mlist->active(i) ? VMDMENU_MOL_ACTIVE : VMDMENU_MOL_INACTIVE,
mlist->displayed(i) ? VMDMENU_MOL_DISPLAYED : VMDMENU_MOL_NONDISPLAYED,
mlist->fixed(i) ? VMDMENU_MOL_FIXED : VMDMENU_MOL_NONFIXED,
molnamebuf, mol->nAtoms, mol->numframes(), mol->num_volume_data()
);
if (i < size())
text(i+1, buf);
else
add(buf);
}
} else {
// we just need to add one new molecule...
int i = nummols - 1;
Molecule *mol = mlist->molecule(i);
// prevent string length overflows
strncpy(molnamebuf, mol->molname(), sizeof(molnamebuf)-1);
// display state of active/displayed/fixed by toggling the text color
sprintf(buf, "%d\t%s\t%s\t%s\t%s\t%-13s\t%-9d\t%-7d\t%-3d",
mol->id(),
mlist->is_top(i) ? "T" : " ",
mlist->active(i) ? VMDMENU_MOL_ACTIVE : VMDMENU_MOL_INACTIVE,
mlist->displayed(i) ? VMDMENU_MOL_DISPLAYED : VMDMENU_MOL_NONDISPLAYED,
mlist->fixed(i) ? VMDMENU_MOL_FIXED : VMDMENU_MOL_NONFIXED,
molnamebuf, mol->nAtoms, mol->numframes(), mol->num_volume_data()
);
if (i < size())
text(i+1, buf); // this shouldn't happen here...
else
add(buf);
}
if (mainmenu) mainmenu->update_gui_state();
}
void MolBrowser::update() {
MoleculeList *mlist = app->moleculeList;
int nummols = mlist->num();
#if 1
//
// XXX this code updates the state of all of the molecules reliably, but
// creates a huge performance cost when thousands of molecules are
// loaded. We really need a scheme to create a changelist and apply
// the changelist to only those molecule browser lines that need updates.
//
if (size() > nummols)
clear();
for (int i=0; i<nummols; i++) {
char buf[256], molnamebuf[81];
Molecule *mol = mlist->molecule(i);
// prevent string length overflows
strncpy(molnamebuf, mol->molname(), sizeof(molnamebuf)-1);
// display state of active/displayed/fixed by toggling the text color
sprintf(buf, "%d\t%s\t%s\t%s\t%s\t%-13s\t%-9d\t%-7d\t%-3d",
mol->id(),
mlist->is_top(i) ? "T" : " ",
mlist->active(i) ? VMDMENU_MOL_ACTIVE : VMDMENU_MOL_INACTIVE,
mlist->displayed(i) ? VMDMENU_MOL_DISPLAYED : VMDMENU_MOL_NONDISPLAYED,
mlist->fixed(i) ? VMDMENU_MOL_FIXED : VMDMENU_MOL_NONFIXED,
molnamebuf, mol->nAtoms, mol->numframes(), mol->num_volume_data()
);
if (i < size())
text(i+1, buf); // update existing browser line
else
add(buf); // add a new browser line
}
#else
//
// XXX this code addresses the performance issues associated with the
// full-update code above, but breaks molecule browser's handling
// of operations multi-molecule selections.
//
char buf[256], molnamebuf[81];
int need_full_regen = 0;
#if 1
// If the browser is larger than needed, we have to
// re-create it from scratch since some molecule was
// potentially deleted from the middle.
// If the size remains fixed, then we need to regenerate
// because we are getting called to rename an existing molecule...
if (size() > nummols || size() == nummols) {
need_full_regen = 1;
}
#else
need_full_regen = 1;
#endif
if (need_full_regen) {
clear();
for (int i=0; i<nummols; i++) {
Molecule *mol = mlist->molecule(i);
// prevent string length overflows
strncpy(molnamebuf, mol->molname(), sizeof(molnamebuf)-1);
// display state of active/displayed/fixed by toggling the text color
sprintf(buf, "%d\t%s\t%s\t%s\t%s\t%-13s\t%-9d\t%-7d\t%-3d",
mol->id(),
mlist->is_top(i) ? "T" : " ",
mlist->active(i) ? VMDMENU_MOL_ACTIVE : VMDMENU_MOL_INACTIVE,
mlist->displayed(i) ? VMDMENU_MOL_DISPLAYED : VMDMENU_MOL_NONDISPLAYED,
mlist->fixed(i) ? VMDMENU_MOL_FIXED : VMDMENU_MOL_NONFIXED,
molnamebuf, mol->nAtoms, mol->numframes(), mol->num_volume_data()
);
if (i < size())
text(i+1, buf); // update existing browser line
else
add(buf); // add a new browser line
}
} else {
// we just need to add one new molecule...
int i = nummols - 1;
Molecule *mol = mlist->molecule(i);
// prevent string length overflows
strncpy(molnamebuf, mol->molname(), sizeof(molnamebuf)-1);
// display state of active/displayed/fixed by toggling the text color
sprintf(buf, "%d\t%s\t%s\t%s\t%s\t%-13s\t%-9d\t%-7d\t%-3d",
mol->id(),
mlist->is_top(i) ? "T" : " ",
mlist->active(i) ? VMDMENU_MOL_ACTIVE : VMDMENU_MOL_INACTIVE,
mlist->displayed(i) ? VMDMENU_MOL_DISPLAYED : VMDMENU_MOL_NONDISPLAYED,
mlist->fixed(i) ? VMDMENU_MOL_FIXED : VMDMENU_MOL_NONFIXED,
molnamebuf, mol->nAtoms, mol->numframes(), mol->num_volume_data()
);
if (i < size())
text(i+1, buf); // update existing browser line
else
add(buf); // add a new browser line
}
#endif
if (mainmenu) mainmenu->update_gui_state();
}
