void convertHitsToASQG(const std::string& indexPrefix, const StringVector& hitsFilenames, std::ostream* pASQGWriter)
{
// Load the suffix array index and the reverse suffix array index
// Note these are not the full suffix arrays
SuffixArray* pFwdSAI = new SuffixArray(indexPrefix + SAI_EXT);
SuffixArray* pRevSAI = new SuffixArray(indexPrefix + RSAI_EXT);
// Load the ReadInfoTable for the queries to look up the ID and lengths of the hits
ReadInfoTable* pQueryRIT = new ReadInfoTable(opt::readsFile);
// If the target file is not the query file, load its ReadInfoTable
ReadInfoTable* pTargetRIT;
if(!opt::targetFile.empty() && opt::targetFile != opt::readsFile)
pTargetRIT = new ReadInfoTable(opt::targetFile);
else
pTargetRIT = pQueryRIT;
bool bIsSelfCompare = pTargetRIT == pQueryRIT;
// Convert the hits to overlaps and write them to the asqg file as initial edges
for(StringVector::const_iterator iter = hitsFilenames.begin(); iter != hitsFilenames.end(); ++iter)
{
printf("[%s] parsing file %s\n", PROGRAM_IDENT, iter->c_str());
std::istream* pReader = createReader(*iter);
// Read each hit sequentially, converting it to an overlap
std::string line;
while(getline(*pReader, line))
{
size_t readIdx;
size_t totalEntries;
bool isSubstring;
OverlapVector ov;
OverlapCommon::parseHitsString(line, pQueryRIT, pTargetRIT, pFwdSAI, pRevSAI, bIsSelfCompare, readIdx, totalEntries, ov, isSubstring);
for(OverlapVector::iterator iter = ov.begin(); iter != ov.end(); ++iter)
{
ASQG::EdgeRecord edgeRecord(*iter);
edgeRecord.write(*pASQGWriter);
}
}
delete pReader;
// delete the hits file
unlink(iter->c_str());
}
// Deallocate data
if(pTargetRIT != pQueryRIT)
delete pTargetRIT;
delete pFwdSAI;
delete pRevSAI;
delete pQueryRIT;
}
void RegistryComponent::SetComponentInfo(const ComponentInfo &info)
{
std::string KeyComponentClassId = Key_ComponentClassIDs;
KeyComponentClassId += "/";
StringVector ClassIDs = info.GetClassIDs();
for (StringVector::const_iterator i = ClassIDs.begin() ; i != ClassIDs.end() ; ++i)
{
std::string ClassId = KeyComponentClassId;
ClassId += *i;
Reg.CreateKey(ClassId);
Reg.SetValue(ClassId, info.GetModuleGuid().c_str());
}
std::string KeyComponentInformation = Key_ComponentInformation;
KeyComponentInformation += "/";
KeyComponentInformation += info.GetModuleGuid();
KeyComponentInformation += "/";
std::string Key = KeyComponentInformation;
Key += Key_Type;
Reg.CreateKey(Key);
Reg.SetValue(Key, info.GetTypeAsStr().c_str());
Key = KeyComponentInformation;
Key += Key_ModuleName;
Reg.CreateKey(Key);
Reg.SetValue(Key, info.GetModuleName().c_str());
Key = KeyComponentInformation;
Key += Key_Location;
Reg.CreateKey(Key);
Reg.SetValue(Key, info.GetLocation().c_str());
Key = KeyComponentInformation;
Key += Key_Description;
Reg.CreateKey(Key);
Reg.SetValue(Key, info.GetDescription().c_str());
Key = KeyComponentInformation;
Key += Key_ClassIDs;
Reg.CreateKey(Key);
unsigned Index = 0;
for (StringVector::const_iterator i = ClassIDs.begin() ; i != ClassIDs.end() ; ++i)
{
std::stringstream Io;
Io << Key_ClassId << Index++;
std::string ClassIdKey = Key + "/" + Io.str();
Reg.CreateKey(ClassIdKey);
Reg.SetValue(ClassIdKey, static_cast<const char*>(i->c_str()));
}
}
//-----------------------------------------------------------------------
void CgProgram::buildArgs(void)
{
StringVector args;
if (!mCompileArgs.empty())
args = StringUtil::split(mCompileArgs);
StringVector::const_iterator i;
if (mSelectedCgProfile == CG_PROFILE_VS_1_1)
{
// Need the 'dcls' argument whenever we use this profile
// otherwise compilation of the assembler will fail
bool dclsFound = false;
for (i = args.begin(); i != args.end(); ++i)
{
if (*i == "dcls")
{
dclsFound = true;
break;
}
}
if (!dclsFound)
{
args.push_back("-profileopts");
args.push_back("dcls");
}
}
// Now split args into that god-awful char** that Cg insists on
freeCgArgs();
mCgArguments = new char*[args.size() + 1];
int index = 0;
for (i = args.begin(); i != args.end(); ++i, ++index)
{
mCgArguments[index] = new char[i->length() + 1];
strcpy(mCgArguments[index], i->c_str());
}
// Null terminate list
mCgArguments[index] = 0;
}
void CLocation::SetMember(size_t i, const string& str)
{
_ASSERTE(i < NB_MEMBER);
switch (i)
{
case ID:
m_ID = str;
break;
case NAME:
m_name = str;
break;
case LAT:
m_lat = ToDouble(str);
break;
case LON:
m_lon = ToDouble(str);
break;
case ELEV:
m_elev = ToDouble(str);
break;
case SSI:
{
StringVector SSIs(str.c_str(), "{}");
for (StringVector::const_iterator it = SSIs.begin(); it != SSIs.end(); it++)
{
string::size_type pos = it->find(':', 0);
if (pos < string::npos)
SetSSI(it->substr(0, pos), it->substr(pos + 1));
}
break;
}
default:
_ASSERTE(false);
}
}
int main(int argc, char * argv[])
{
try
{
Options options;
options.descriptions.add_options()
("show-urls", "Show all the capability URLs")
;
if (!options.ParseCommandLine(argc, argv))
{
return 0;
}
RetsSessionPtr session = options.RetsLogin();
if (!session)
{
cout << "Login failed\n";
return -1;
}
cout << "Logged in\n";
LoginResponse * login = session->GetLoginResponse();
CapabilityUrls * urls = session->GetCapabilityUrls();
cout << "Member name: " << login->GetMemberName() << endl;
cout << "Search URL: " << urls->GetSearchUrl() << endl;
cout << "Action:\n" << session->GetAction() << endl;
if (session->GetDetectedRetsVersion() >= RETS_1_8)
{
try
{
cout << "User ID:" << login->GetUserID() << endl;
cout << "User Class: " << login->GetUserClass() << endl;
cout << "User Level: " << login->GetUserLevel() << endl;
cout << "Agent Code: " << login->GetAgentCode() << endl;
if (options.count("verbose"))
{
cout << "Broker Code: " << login->GetBrokerCode() << endl;
cout << "Broker Branch: " << login->GetBrokerBranch() << endl;
cout << "Metadata ID: " << login->GetMetadataID() << endl;
cout << "Metadata Version: " << login->GetMetadataVersion() << endl;
cout << "Metadata Timestamp: " << login->GetMetadataTimestamp() << endl;
cout << "Min Metadata Timestamp: " << login->GetMinMetadataTimestamp() << endl;
cout << "Balance: " << login->GetBalance() << endl;
cout << "Timeout Seconds: " << login->GetTimeout() << endl;
cout << "Password Expiration: " << login->GetPasswordExpire() << endl;
cout << "Password Expiration Warn: " << login->GetWarnPasswordExpirationDays() << endl;
cout << "OfficeList: " << login->GetOfficeList() << endl;
cout << "Standard Names Version: " << login->GetStandardNamesVersion() << endl;
cout << "Vendor Name: " << login->GetVendorName() << endl;
cout << "Server Product Name: " << login->GetServerProductName() << endl;
cout << "Operator Name: " << login->GetOperatorName() << endl;
cout << "Role Name: " << login->GetRoleName() << endl;
cout << "Support Contact Information: " << login->GetSupportContactInformation() << endl;
}
}
catch (RetsException & e)
{
/*
* The ServerInformation Transaction is not supported.
* Continue silently.
*/
}
}
if (options.count("show-urls"))
{
/*
* Action and Search URLs unconditionally shown above.
*/
cout << "Change Password URL: " << urls->GetChangePasswordUrl() << endl;
cout << "GetObject URL: " << urls->GetGetObjectUrl() << endl;
cout << "Login Complete URL: " << urls->GetLoginCompleteUrl() << endl;
cout << "Logout URL: " << urls->GetLogoutUrl() << endl;
cout << "GetMetadata URL: " << urls->GetGetMetadataUrl() << endl;
cout << "ServerInformation URL: " << urls->GetServerInformationUrl() << endl;
cout << "Update URL: " << urls->GetUpdateUrl() << endl;
if (session->GetDetectedRetsVersion() >= RETS_1_8)
{
cout << "Payload List URL: " << urls->GetPayloadListUrl() << endl;
}
cout << endl;
}
if (session->GetDetectedRetsVersion() == RETS_1_7)
{
try
{
ServerInformationResponseAPtr serverInfo = session->GetServerInformation();
if (serverInfo.get())
{
StringVector parameters = serverInfo->GetParameters();
StringVector::const_iterator i;
for (i = parameters.begin(); i != parameters.end(); i++)
{
if (i->empty())
{
continue;
}
cout << *i << ": " << serverInfo->GetValue(*i) << endl;
}
}
}
catch (RetsException & e)
{
/*
* The ServerInformation Transaction is not supported.
* Continue silently.
*/
}
}
if (session->GetDetectedRetsVersion() >= RETS_1_8)
{
try
{
PayloadListResultSetAPtr payloadList = session->GetPayloadList("");
if (options.count("verbose"))
{
cout << setw(15) << "Class" << ": "
<< setw(0) << payloadList->GetPayloadClass() << endl;
cout << setw(15) << "Resource" << ": "
<< setw(0) << payloadList->GetPayloadResource() << endl;
cout << setw(15) << "Date" << ": "
<< setw(0) << payloadList->GetPayloadDate() << endl;
cout << setw(15) << "Version" << ": "
<< setw(0) << payloadList->GetPayloadVersion() << endl << endl;
}
while (payloadList->HasNext())
{
StringVector columns = payloadList->GetColumns();
StringVector::const_iterator i;
for (i = columns.begin(); i != columns.end(); i++)
{
string column = *i;
cout << setw(15) << column << ": "
<< setw(0) << payloadList->GetString(column) << endl;
}
cout << endl;
}
}
catch (RetsException & e)
{
/*
* The GetPayloadList Transaction is not supported.
*/
cout << e.what() << endl;
}
}
LogoutResponseAPtr logout = session->Logout();
cout << "Logged out\n";
if (logout.get())
{
cout << "Billing information: " << logout->GetBillingInfo()
<< endl;
cout << "Connect time: " << logout->GetConnectTime() << endl;
cout << "Message: " << logout->GetLogoutMessage() << endl;
}
}
catch (RetsException & e)
{
e.PrintFullReport(cerr);
return 1;
}
catch (exception & e)
{
cerr << e.what() << endl;
return 2;
}
return 0;
}
int main(int argc, char * argv[])
{
try
{
Options options;
if (!options.ParseCommandLine(argc, argv))
{
return 0;
}
RetsSessionPtr session = options.RetsLogin();
if (!session)
{
cout << "Login failed\n";
return -1;
}
if (session->GetDetectedRetsVersion() != session->GetRetsVersion())
{
cout << "** Warning, requested RETS version \""
<< session->RetsVersionToString(session->GetRetsVersion())
<< "\", got version \""
<< session->RetsVersionToString(session->GetDetectedRetsVersion())
<< "\" ** " << endl;
}
if (session->GetDetectedRetsVersion() == RETS_1_7)
{
try
{
ServerInformationResponseAPtr serverInfo = session->GetServerInformation();
if (serverInfo.get())
{
StringVector parameters = serverInfo->GetParameters();
StringVector::const_iterator i;
for (i = parameters.begin(); i != parameters.end(); i++)
{
if (i->empty())
{
continue;
}
cout << *i << ": " << serverInfo->GetValue(*i) << endl;
}
}
}
catch (RetsException & e)
{
/*
* The ServerInformation Transaction is not supported.
* Continue silently.
*/
}
}
RetsMetadata * metadata = session->GetMetadata();
dumpSystem(metadata);
dumpAllForeignKeys(metadata);
dumpAllResources(metadata);
session->Logout();
}
catch (RetsException & e)
{
e.PrintFullReport(cout);
return 1;
}
catch (exception & e)
{
cout << e.what() << endl;
return 2;
}
return 0;
}